RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 A0A1W2PN81 502 aa12.45□□□□□ -0.42
RAB5C-201ENST00000346213 ZNF705EA8MWA4 302 aaPredicted RBP12.45□□□□□ -0.42
RAB5C-201ENST00000346213 CCL24O00175 119 aa12.45□□□□□ -0.42
RAB5C-201ENST00000346213 CHRNA7P36544 502 aa12.45□□□□□ -0.42
RAB5C-201ENST00000346213 TMEM267Q0VDI3 215 aaPredicted RBP12.45□□□□□ -0.42
RAB5C-201ENST00000346213 RTL8BQ17RB0 113 aa12.45□□□□□ -0.42
RAB5C-201ENST00000346213 TMEM177Q53S58 311 aa12.45□□□□□ -0.42
RAB5C-201ENST00000346213 SPANXN5Q5MJ07 72 aa12.45□□□□□ -0.42
RAB5C-201ENST00000346213 SSX9Q7RTT3 188 aa12.45□□□□□ -0.42
RAB5C-201ENST00000346213 TMEM217Q8N7C4 229 aa12.45□□□□□ -0.42
RAB5C-201ENST00000346213 LFNGQ8NES3 379 aa12.45□□□□□ -0.42
RAB5C-201ENST00000346213 OR4A16Q8NH70 328 aa12.45□□□□□ -0.42
RAB5C-201ENST00000346213 DTD1Q8TEA8 209 aa12.45□□□□□ -0.42
RAB5C-201ENST00000346213 QTRT1Q9BXR0 403 aaKnown RBP12.45□□□□□ -0.42
RAB5C-201ENST00000346213 TMEM140Q9NV12 185 aa12.45□□□□□ -0.42
RAB5C-201ENST00000346213 K7EIL1 84 aa12.44□□□□□ -0.42
RAB5C-201ENST00000346213 METTL15P1P0C7V9 234 aa12.44□□□□□ -0.42
RAB5C-201ENST00000346213 MYCNOSP40205 109 aa12.44□□□□□ -0.42
RAB5C-201ENST00000346213 SPCS3P61009 180 aa12.44□□□□□ -0.42
RAB5C-201ENST00000346213 HBG1P69891 147 aa12.44□□□□□ -0.42
RAB5C-201ENST00000346213 HBG2P69892 147 aa12.44□□□□□ -0.42
RAB5C-201ENST00000346213 BLOC1S1P78537 153 aa12.44□□□□□ -0.42
RAB5C-201ENST00000346213 ZNF429Q86V71 674 aa12.44□□□□□ -0.42
RAB5C-201ENST00000346213 HSD17B11Q8NBQ5 300 aa12.44□□□□□ -0.42
RAB5C-201ENST00000346213 C4orf3Q8WVX3 66 aa12.44□□□□□ -0.42
RAB5C-201ENST00000346213 FLYWCH2Q96CP2 140 aaKnown RBP12.44□□□□□ -0.42
RAB5C-201ENST00000346213 RHOVQ96L33 236 aa12.44□□□□□ -0.42
RAB5C-201ENST00000346213 HARBI1Q96MB7 349 aa12.44□□□□□ -0.42
RAB5C-201ENST00000346213 WI2-2373I1.2A0A1W2PRP0 233 aa12.43□□□□□ -0.42
RAB5C-201ENST00000346213 APOA2P02652 100 aa12.43□□□□□ -0.42
RAB5C-201ENST00000346213 IL6RP08887 468 aaPredicted RBP12.43□□□□□ -0.42
RAB5C-201ENST00000346213 ZP3P21754 424 aa12.43□□□□□ -0.42
RAB5C-201ENST00000346213 RAB5CP51148 216 aa12.43□□□□□ -0.42
RAB5C-201ENST00000346213 RAB9AP51151 201 aa12.43□□□□□ -0.42
RAB5C-201ENST00000346213 ARL16Q0P5N6 197 aa12.43□□□□□ -0.42
RAB5C-201ENST00000346213 PLGLAQ15195 96 aa12.43□□□□□ -0.42
RAB5C-201ENST00000346213 C10orf55Q5SWW7 151 aa12.43□□□□□ -0.42
RAB5C-201ENST00000346213 ZNF562Q6V9R5 426 aa12.43□□□□□ -0.42
RAB5C-201ENST00000346213 VKORC1L1Q8N0U8 176 aa12.43□□□□□ -0.42
RAB5C-201ENST00000346213 RNF5Q99942 180 aa12.43□□□□□ -0.42
RAB5C-201ENST00000346213 COL7A1Q02388 2944 aa12.43□□□□□ -0.42
RAB5C-201ENST00000346213 CEBPZOSA8MTT3 80 aa12.42□□□□□ -0.42
RAB5C-201ENST00000346213 APELAP0DMC3 54 aa12.42□□□□□ -0.42
RAB5C-201ENST00000346213 ATP6V0CP27449 155 aa12.42□□□□□ -0.42
RAB5C-201ENST00000346213 OR2B8PP59922 312 aa12.42□□□□□ -0.42
RAB5C-201ENST00000346213 OR4A47Q6IF82 309 aa12.42□□□□□ -0.42
RAB5C-201ENST00000346213 C19orf35Q6ZS72 473 aa12.42□□□□□ -0.42
RAB5C-201ENST00000346213 HAPLN4Q86UW8 402 aa12.42□□□□□ -0.42
RAB5C-201ENST00000346213 PPP1R27Q86WC6 154 aa12.42□□□□□ -0.42
RAB5C-201ENST00000346213 ARPC1AQ92747 370 aa12.42□□□□□ -0.42
RAB5C-201ENST00000346213 MARC2Q969Z3 335 aa12.42□□□□□ -0.42
RAB5C-201ENST00000346213 GNPNAT1Q96EK6 184 aaPredicted RBP12.42□□□□□ -0.42
RAB5C-201ENST00000346213 TSNAXQ99598 290 aaKnown RBP12.42□□□□□ -0.42
RAB5C-201ENST00000346213 STRAPQ9Y3F4 350 aaKnown RBP12.42□□□□□ -0.42
RAB5C-201ENST00000346213 TRAV3A0A0B4J244 114 aa12.42□□□□□ -0.42
RAB5C-201ENST00000346213 A0A1B0GW64 132 aa12.42□□□□□ -0.42
RAB5C-201ENST00000346213 RAB19A4D1S5 217 aa12.42□□□□□ -0.42
RAB5C-201ENST00000346213 C15orf61A6NNL5 157 aa12.42□□□□□ -0.42
RAB5C-201ENST00000346213 SCAF4O95104 1147 aaKnown RBP12.42□□□□□ -0.42
RAB5C-201ENST00000346213 IFNA17P01571 189 aa12.42□□□□□ -0.42
RAB5C-201ENST00000346213 EGFEM1PQ0D2K5 195 aa12.42□□□□□ -0.42
RAB5C-201ENST00000346213 FXYD3Q14802 87 aa12.42□□□□□ -0.42
RAB5C-201ENST00000346213 OSR1Q8TAX0 266 aaPredicted RBP12.42□□□□□ -0.42
RAB5C-201ENST00000346213 RCC1LQ96I51 464 aaKnown RBP12.42□□□□□ -0.42
RAB5C-201ENST00000346213 MS4A10Q96PG2 267 aa12.42□□□□□ -0.42
RAB5C-201ENST00000346213 OR4C12Q96R67 309 aa12.42□□□□□ -0.42
RAB5C-201ENST00000346213 PARD6GQ9BYG4 376 aaPredicted RBP12.42□□□□□ -0.42
RAB5C-201ENST00000346213 SH3BGRL3Q9H299 93 aa12.42□□□□□ -0.42
RAB5C-201ENST00000346213 FOXA2Q9Y261 457 aaPredicted RBP12.42□□□□□ -0.42
RAB5C-201ENST00000346213 PMS2P5A8MQ11 134 aa12.41□□□□□ -0.42
RAB5C-201ENST00000346213 KRBOX1C9JBD0 128 aa12.41□□□□□ -0.42
RAB5C-201ENST00000346213 TEX46H3BTG2 121 aa12.41□□□□□ -0.42
RAB5C-201ENST00000346213 IFNA5P01569 189 aa12.41□□□□□ -0.42
RAB5C-201ENST00000346213 SAA1P0DJI8 122 aaPredicted RBP12.41□□□□□ -0.42
RAB5C-201ENST00000346213 MYOD1P15172 320 aa12.41□□□□□ -0.42
RAB5C-201ENST00000346213 ATP6V1FQ16864 119 aa12.41□□□□□ -0.42
RAB5C-201ENST00000346213 UNQ5815/PRO19632Q6UWF5 114 aa12.41□□□□□ -0.42
RAB5C-201ENST00000346213 LINC00518Q8N0U6 118 aa12.41□□□□□ -0.42
RAB5C-201ENST00000346213 OR11H1Q8NG94 326 aa12.41□□□□□ -0.42
RAB5C-201ENST00000346213 ABHD5Q8WTS1 349 aa12.41□□□□□ -0.42
RAB5C-201ENST00000346213 UBE2E2Q96LR5 201 aa12.41□□□□□ -0.42
RAB5C-201ENST00000346213 E7EUB6 86 aa12.4□□□□□ -0.42
RAB5C-201ENST00000346213 IGHV3-11P01762 117 aa12.4□□□□□ -0.42
RAB5C-201ENST00000346213 SLC38A11Q08AI6 406 aa12.4□□□□□ -0.42
RAB5C-201ENST00000346213 UQCC3Q6UW78 93 aa12.4□□□□□ -0.42
RAB5C-201ENST00000346213 BTNL8Q6UX41 500 aa12.4□□□□□ -0.42
RAB5C-201ENST00000346213 IL34Q6ZMJ4 242 aa12.4□□□□□ -0.42
RAB5C-201ENST00000346213 Q6ZRG5 221 aa12.4□□□□□ -0.42
RAB5C-201ENST00000346213 LYPD6BQ8NI32 183 aa12.4□□□□□ -0.42
RAB5C-201ENST00000346213 TMEM14BQ9NUH8 114 aa12.4□□□□□ -0.42
RAB5C-201ENST00000346213 BET1LQ9NYM9 111 aa12.4□□□□□ -0.42
RAB5C-201ENST00000346213 IGHV4OR15-8A0A075B7B6 117 aa12.39□□□□□ -0.43
RAB5C-201ENST00000346213 A0A087WW49 117 aa12.39□□□□□ -0.43
RAB5C-201ENST00000346213 UMAD1C9J7I0 102 aa12.39□□□□□ -0.43
RAB5C-201ENST00000346213 UPK2O00526 184 aa12.39□□□□□ -0.43
RAB5C-201ENST00000346213 OR8U8P0C7N1 319 aa12.39□□□□□ -0.43
RAB5C-201ENST00000346213 HSPE1P61604 102 aaKnown RBP12.39□□□□□ -0.43
RAB5C-201ENST00000346213 RUNX1Q01196 453 aa12.39□□□□□ -0.43
RAB5C-201ENST00000346213 PUSL1Q8N0Z8 303 aaKnown RBP12.39□□□□□ -0.43
RAB5C-201ENST00000346213 LILRB2Q8N423 598 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms