RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 RNFT1Q5M7Z0 435 aa14.57□□□□□ -0.08
SPAST-202ENST00000345662 IGKV3D-15A0A087WSY6 115 aa14.56□□□□□ -0.08
SPAST-202ENST00000345662 IQCF6A8MYZ5 107 aa14.56□□□□□ -0.08
SPAST-202ENST00000345662 IGKV3-15P01624 115 aa14.56□□□□□ -0.08
SPAST-202ENST00000345662 FAM90A1Q86YD7 464 aa14.56□□□□□ -0.08
SPAST-202ENST00000345662 SAP25Q8TEE9 199 aa14.56□□□□□ -0.08
SPAST-202ENST00000345662 FOXA2Q9Y261 457 aaPredicted RBP14.56□□□□□ -0.08
SPAST-202ENST00000345662 MRPS16Q9Y3D3 137 aaKnown RBP14.56□□□□□ -0.08
SPAST-202ENST00000345662 GREB1Q4ZG55 1949 aa14.56□□□□□ -0.08
SPAST-202ENST00000345662 SCN10AQ9Y5Y9 1956 aa14.56□□□□□ -0.08
SPAST-202ENST00000345662 IGHV3-35A0A0C4DH35 117 aa14.56□□□□□ -0.08
SPAST-202ENST00000345662 PSG1P11464 419 aa14.56□□□□□ -0.08
SPAST-202ENST00000345662 RTN4RL2Q86UN3 420 aa14.56□□□□□ -0.08
SPAST-202ENST00000345662 TCRBV4S1A1TA0A5B7 111 aa14.56□□□□□ -0.08
SPAST-202ENST00000345662 GAGE12BA1L429 117 aa14.56□□□□□ -0.08
SPAST-202ENST00000345662 PPBPP02775 128 aa14.56□□□□□ -0.08
SPAST-202ENST00000345662 DUTP33316 252 aaKnown RBP14.56□□□□□ -0.08
SPAST-202ENST00000345662 SFTA2Q6UW10 78 aa14.56□□□□□ -0.08
SPAST-202ENST00000345662 NAA38Q9BRA0 125 aaKnown RBP14.56□□□□□ -0.08
SPAST-202ENST00000345662 MRPL20Q9BYC9 149 aaKnown RBP14.56□□□□□ -0.08
SPAST-202ENST00000345662 IGLV3-32A0A0A0MS00 114 aa14.56□□□□□ -0.08
SPAST-202ENST00000345662 CFPP27918 469 aa14.56□□□□□ -0.08
SPAST-202ENST00000345662 FAM159AQ6UWV7 190 aa14.56□□□□□ -0.08
SPAST-202ENST00000345662 SAA2-SAA4A0A096LPE2 208 aa14.55□□□□□ -0.08
SPAST-202ENST00000345662 SAA2P0DJI9 122 aaPredicted RBP14.55□□□□□ -0.08
SPAST-202ENST00000345662 MORN2Q502X0 79 aa14.55□□□□□ -0.08
SPAST-202ENST00000345662 PSME4Q14997 1843 aa14.55□□□□□ -0.08
SPAST-202ENST00000345662 LCTP09848 1927 aa14.55□□□□□ -0.08
SPAST-202ENST00000345662 hDV102S1A0JD36 115 aa14.55□□□□□ -0.08
SPAST-202ENST00000345662 IGKV1-5P01602 117 aa14.55□□□□□ -0.08
SPAST-202ENST00000345662 FTH1P19P0C7X4 201 aa14.55□□□□□ -0.08
SPAST-202ENST00000345662 ESDP10768 282 aa14.55□□□□□ -0.08
SPAST-202ENST00000345662 SLC25A2Q9BXI2 301 aa14.55□□□□□ -0.08
SPAST-202ENST00000345662 MDC1Q14676 2089 aaKnown RBP14.55□□□□□ -0.08
SPAST-202ENST00000345662 IGKCP01834 107 aa14.55□□□□□ -0.08
SPAST-202ENST00000345662 GLRXP35754 106 aa14.55□□□□□ -0.08
SPAST-202ENST00000345662 MRAP2Q96G30 205 aa14.55□□□□□ -0.08
SPAST-202ENST00000345662 DMRTA2Q96SC8 542 aa14.55□□□□□ -0.08
SPAST-202ENST00000345662 CYSLTR1Q9Y271 337 aa14.55□□□□□ -0.08
SPAST-202ENST00000345662 ASIPP42127 132 aa14.55□□□□□ -0.08
SPAST-202ENST00000345662 PPP1R32Q7Z5V6 425 aa14.55□□□□□ -0.08
SPAST-202ENST00000345662 PF4V1P10720 104 aa14.54□□□□□ -0.08
SPAST-202ENST00000345662 PRCDQ00LT1 54 aa14.54□□□□□ -0.08
SPAST-202ENST00000345662 IGKV1-27A0A075B6S5 117 aa14.54□□□□□ -0.08
SPAST-202ENST00000345662 A0A087X0K7 114 aa14.54□□□□□ -0.08
SPAST-202ENST00000345662 CECR9P0C854 216 aa14.54□□□□□ -0.08
SPAST-202ENST00000345662 FBXL15Q9H469 300 aa14.54□□□□□ -0.08
SPAST-202ENST00000345662 PLXNA1Q9UIW2 1896 aa14.54□□□□□ -0.08
SPAST-202ENST00000345662 UBE2L6O14933 153 aa14.54□□□□□ -0.08
SPAST-202ENST00000345662 PFN1P07737 140 aaKnown RBP14.54□□□□□ -0.08
SPAST-202ENST00000345662 DYNLRB2Q8TF09 96 aa14.54□□□□□ -0.08
SPAST-202ENST00000345662 DNASE2BQ8WZ79 361 aa14.54□□□□□ -0.08
SPAST-202ENST00000345662 SIGLEC12Q96PQ1 595 aa14.54□□□□□ -0.08
SPAST-202ENST00000345662 VKORC1Q9BQB6 163 aa14.54□□□□□ -0.08
SPAST-202ENST00000345662 MPDZO75970 2070 aa14.53□□□□□ -0.08
SPAST-202ENST00000345662 CD5LO43866 347 aa14.53□□□□□ -0.08
SPAST-202ENST00000345662 MAJINQ3KP22 176 aa14.53□□□□□ -0.08
SPAST-202ENST00000345662 SPATA31B1PQ5VZV4 182 aa14.53□□□□□ -0.08
SPAST-202ENST00000345662 LOC285556D6RIA3 1793 aa14.53□□□□□ -0.08
SPAST-202ENST00000345662 A8MWV9 139 aa14.53□□□□□ -0.08
SPAST-202ENST00000345662 CELA3AP09093 270 aa14.53□□□□□ -0.08
SPAST-202ENST00000345662 FAM216BQ8N7L0 139 aa14.53□□□□□ -0.08
SPAST-202ENST00000345662 FABP5P3A8MUU1 101 aa14.53□□□□□ -0.08
SPAST-202ENST00000345662 GUSBP1Q15486 140 aa14.53□□□□□ -0.08
SPAST-202ENST00000345662 RNF144BQ7Z419 303 aa14.53□□□□□ -0.08
SPAST-202ENST00000345662 BMPERQ8N8U9 685 aa14.53□□□□□ -0.08
SPAST-202ENST00000345662 EEF1AKMT3Q96AZ1 226 aa14.53□□□□□ -0.08
SPAST-202ENST00000345662 ATP5G2Q06055 141 aa14.53□□□□□ -0.08
SPAST-202ENST00000345662 PSG8Q9UQ74 426 aa14.53□□□□□ -0.08
SPAST-202ENST00000345662 SYS1-DBNDD2H3BUS1 97 aa14.52□□□□□ -0.08
SPAST-202ENST00000345662 CKS1BP61024 79 aa14.52□□□□□ -0.08
SPAST-202ENST00000345662 UBTD1Q9HAC8 227 aa14.52□□□□□ -0.08
SPAST-202ENST00000345662 SEPSECSQ9HD40 501 aaKnown RBP14.52□□□□□ -0.08
SPAST-202ENST00000345662 SLC25A48Q6ZT89 311 aaKnown RBP14.52□□□□□ -0.08
SPAST-202ENST00000345662 FAM201AQ5SY85 155 aa14.52□□□□□ -0.09
SPAST-202ENST00000345662 SMPXQ9UHP9 88 aa14.52□□□□□ -0.09
SPAST-202ENST00000345662 IGHV3OR16-13A0A075B7E8 117 aa14.52□□□□□ -0.09
SPAST-202ENST00000345662 IGHV3-74A0A0B4J1X5 117 aa14.52□□□□□ -0.09
SPAST-202ENST00000345662 NPSP0C0P6 89 aa14.52□□□□□ -0.09
SPAST-202ENST00000345662 Q0VG73 95 aa14.52□□□□□ -0.09
SPAST-202ENST00000345662 FOXC1Q12948 553 aa14.52□□□□□ -0.09
SPAST-202ENST00000345662 BCL6BQ8N143 479 aaPredicted RBP14.52□□□□□ -0.09
SPAST-202ENST00000345662 MGST2Q99735 147 aa14.51□□□□□ -0.09
SPAST-202ENST00000345662 GTSF1LQ9H1H1 148 aa14.51□□□□□ -0.09
SPAST-202ENST00000345662 C21orf62Q9NYP8 219 aa14.51□□□□□ -0.09
SPAST-202ENST00000345662 SRSF1Q07955 248 aaKnown RBP eCLIP14.51□□□□□ -0.09
SPAST-202ENST00000345662 BRCA1P38398 1863 aaKnown RBP14.51□□□□□ -0.09
SPAST-202ENST00000345662 DOCK3Q8IZD9 2030 aa14.51□□□□□ -0.09
SPAST-202ENST00000345662 RNASE1P07998 156 aaKnown RBP14.51□□□□□ -0.09
SPAST-202ENST00000345662 DDB2Q92466 427 aa14.51□□□□□ -0.09
SPAST-202ENST00000345662 SELENOKQ9Y6D0 94 aa14.51□□□□□ -0.09
SPAST-202ENST00000345662 S4R3C0 116 aa14.51□□□□□ -0.09
SPAST-202ENST00000345662 IGLV3-12A0A075B6K2 115 aa14.51□□□□□ -0.09
SPAST-202ENST00000345662 LINC00312Q9Y6C7 94 aa14.51□□□□□ -0.09
SPAST-202ENST00000345662 ESPL1Q14674 2120 aa14.51□□□□□ -0.09
SPAST-202ENST00000345662 A0A0G2JMM0 328 aa14.5□□□□□ -0.09
SPAST-202ENST00000345662 A0A1W2PPB8 328 aa14.5□□□□□ -0.09
SPAST-202ENST00000345662 KIR3DP1A8MWS1 328 aa14.5□□□□□ -0.09
SPAST-202ENST00000345662 LINC01559Q495D7 138 aa14.5□□□□□ -0.09
SPAST-202ENST00000345662 MESP1Q9BRJ9 268 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms