RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 EVI2AP22794 236 aa10.09□□□□□ -0.79
COL12A1-202ENST00000345356 DNASE2BQ8WZ79 361 aa10.09□□□□□ -0.79
COL12A1-202ENST00000345356 TIMP4Q99727 224 aa10.09□□□□□ -0.79
COL12A1-202ENST00000345356 ARID2Q68CP9 1835 aa10.09□□□□□ -0.79
COL12A1-202ENST00000345356 IGKV1-5P01602 117 aa10.09□□□□□ -0.79
COL12A1-202ENST00000345356 ZNF138P52744 262 aa10.09□□□□□ -0.79
COL12A1-202ENST00000345356 CD3EP07766 207 aa10.09□□□□□ -0.79
COL12A1-202ENST00000345356 SSBP2P81877 361 aaPredicted RBP10.09□□□□□ -0.79
COL12A1-202ENST00000345356 TMEM30BQ3MIR4 351 aa10.09□□□□□ -0.79
COL12A1-202ENST00000345356 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.09□□□□□ -0.79
COL12A1-202ENST00000345356 FXYD7P58549 80 aa10.09□□□□□ -0.79
COL12A1-202ENST00000345356 CHTOPQ9Y3Y2 248 aaKnown RBP10.09□□□□□ -0.79
COL12A1-202ENST00000345356 RGPD3A6NKT7 1758 aaPredicted RBP10.09□□□□□ -0.79
COL12A1-202ENST00000345356 RGPD4Q7Z3J3 1758 aa10.09□□□□□ -0.79
COL12A1-202ENST00000345356 MPDZO75970 2070 aa10.09□□□□□ -0.79
COL12A1-202ENST00000345356 HEATR5BQ9P2D3 2071 aa10.09□□□□□ -0.79
COL12A1-202ENST00000345356 NPIPB11E5RHQ5 1161 aa10.09□□□□□ -0.79
COL12A1-202ENST00000345356 CLEC2AQ6UVW9 174 aa10.09□□□□□ -0.79
COL12A1-202ENST00000345356 OR9G1Q8NH87 305 aa10.09□□□□□ -0.79
COL12A1-202ENST00000345356 PILRBQ9UKJ0 227 aa10.09□□□□□ -0.79
COL12A1-202ENST00000345356 CEACAM8P31997 349 aaPredicted RBP10.08□□□□□ -0.8
COL12A1-202ENST00000345356 ZNF497Q6ZNH5 498 aa10.08□□□□□ -0.8
COL12A1-202ENST00000345356 TNFRSF14Q92956 283 aa10.08□□□□□ -0.8
COL12A1-202ENST00000345356 SMPXQ9UHP9 88 aa10.08□□□□□ -0.8
COL12A1-202ENST00000345356 TDRD15B5MCY1 1934 aaKnown RBP10.08□□□□□ -0.8
COL12A1-202ENST00000345356 IGKV3D-11A0A0A0MRZ8 115 aa10.08□□□□□ -0.8
COL12A1-202ENST00000345356 TRAV2A0A0B4J234 112 aa10.08□□□□□ -0.8
COL12A1-202ENST00000345356 H3BRM9 83 aa10.08□□□□□ -0.8
COL12A1-202ENST00000345356 ZNF48Q96MX3 618 aaPredicted RBP10.08□□□□□ -0.8
COL12A1-202ENST00000345356 MGST2Q99735 147 aa10.08□□□□□ -0.8
COL12A1-202ENST00000345356 UNC13CQ8NB66 2214 aa10.08□□□□□ -0.8
COL12A1-202ENST00000345356 SMAD7O15105 426 aaKnown RBP10.08□□□□□ -0.8
COL12A1-202ENST00000345356 PPBPP02775 128 aa10.08□□□□□ -0.8
COL12A1-202ENST00000345356 SRSF1Q07955 248 aaKnown RBP eCLIP10.08□□□□□ -0.8
COL12A1-202ENST00000345356 OR13C6PQ8NH95 151 aa10.08□□□□□ -0.8
COL12A1-202ENST00000345356 PSME4Q14997 1843 aa10.08□□□□□ -0.8
COL12A1-202ENST00000345356 D6R8Y8 96 aa10.08□□□□□ -0.8
COL12A1-202ENST00000345356 SHISA5Q8N114 240 aa10.08□□□□□ -0.8
COL12A1-202ENST00000345356 RPRMLQ8N4K4 120 aa10.08□□□□□ -0.8
COL12A1-202ENST00000345356 S4R3C0 116 aa10.08□□□□□ -0.8
COL12A1-202ENST00000345356 IGHV3OR16-13A0A075B7E8 117 aa10.07□□□□□ -0.8
COL12A1-202ENST00000345356 IGHV3-74A0A0B4J1X5 117 aa10.07□□□□□ -0.8
COL12A1-202ENST00000345356 C9orf118A6NHY6 69 aa10.07□□□□□ -0.8
COL12A1-202ENST00000345356 FOXA2Q9Y261 457 aaPredicted RBP10.07□□□□□ -0.8
COL12A1-202ENST00000345356 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.07□□□□□ -0.8
COL12A1-202ENST00000345356 LHX2P50458 406 aa10.07□□□□□ -0.8
COL12A1-202ENST00000345356 SUMO2P61956 95 aaKnown RBP10.07□□□□□ -0.8
COL12A1-202ENST00000345356 EBLN2Q6P2I7 272 aa10.07□□□□□ -0.8
COL12A1-202ENST00000345356 TEX43Q6ZNM6 134 aa10.07□□□□□ -0.8
COL12A1-202ENST00000345356 SLC25A48Q6ZT89 311 aaKnown RBP10.07□□□□□ -0.8
COL12A1-202ENST00000345356 DUSP15Q9H1R2 295 aaPredicted RBP10.07□□□□□ -0.8
COL12A1-202ENST00000345356 KLF17Q5JT82 389 aaPredicted RBP10.07□□□□□ -0.8
COL12A1-202ENST00000345356 PMS2CLQ68D20 193 aa10.07□□□□□ -0.8
COL12A1-202ENST00000345356 WBP1Q96G27 269 aa10.07□□□□□ -0.8
COL12A1-202ENST00000345356 PSG8Q9UQ74 426 aa10.07□□□□□ -0.8
COL12A1-202ENST00000345356 FAM90A27PA6NNH2 459 aa10.07□□□□□ -0.8
COL12A1-202ENST00000345356 UPK2O00526 184 aa10.07□□□□□ -0.8
COL12A1-202ENST00000345356 C1orf122Q6ZSJ8 110 aa10.07□□□□□ -0.8
COL12A1-202ENST00000345356 NYNRINQ9P2P1 1898 aaKnown RBP10.07□□□□□ -0.8
COL12A1-202ENST00000345356 TMEM238C9JI98 176 aa10.07□□□□□ -0.8
COL12A1-202ENST00000345356 ASIPP42127 132 aa10.07□□□□□ -0.8
COL12A1-202ENST00000345356 ERG28Q9UKR5 140 aa10.07□□□□□ -0.8
COL12A1-202ENST00000345356 TCRBV4S1A1TA0A5B7 111 aa10.06□□□□□ -0.8
COL12A1-202ENST00000345356 J3QW42 95 aa10.06□□□□□ -0.8
COL12A1-202ENST00000345356 SAA1P0DJI8 122 aaPredicted RBP10.06□□□□□ -0.8
COL12A1-202ENST00000345356 CHAC1Q9BUX1 264 aa10.06□□□□□ -0.8
COL12A1-202ENST00000345356 PLSCR4Q9NRQ2 329 aa10.06□□□□□ -0.8
COL12A1-202ENST00000345356 IGLL1P15814 213 aa10.06□□□□□ -0.8
COL12A1-202ENST00000345356 AZU1P20160 251 aa10.06□□□□□ -0.8
COL12A1-202ENST00000345356 CD69Q07108 199 aa10.06□□□□□ -0.8
COL12A1-202ENST00000345356 Q6ZVH6 145 aa10.06□□□□□ -0.8
COL12A1-202ENST00000345356 C5orf24Q7Z6I8 188 aa10.06□□□□□ -0.8
COL12A1-202ENST00000345356 IGKV1-27A0A075B6S5 117 aa10.06□□□□□ -0.8
COL12A1-202ENST00000345356 UBE2L6O14933 153 aa10.06□□□□□ -0.8
COL12A1-202ENST00000345356 CCL25O15444 150 aa10.06□□□□□ -0.8
COL12A1-202ENST00000345356 NCR2O95944 276 aa10.06□□□□□ -0.8
COL12A1-202ENST00000345356 C18orf32Q8TCD1 76 aa10.06□□□□□ -0.8
COL12A1-202ENST00000345356 SRSF7Q16629 238 aaKnown RBP eCLIP10.06□□□□□ -0.8
COL12A1-202ENST00000345356 FAM71F2Q6NXP2 309 aa10.06□□□□□ -0.8
COL12A1-202ENST00000345356 VOPP1Q96AW1 172 aa10.06□□□□□ -0.8
COL12A1-202ENST00000345356 PGPEP1Q9NXJ5 209 aa10.06□□□□□ -0.8
COL12A1-202ENST00000345356 CHCHD2Q9Y6H1 151 aaPredicted RBP10.06□□□□□ -0.8
COL12A1-202ENST00000345356 IGHV2-26A0A0B4J1V2 119 aa10.05□□□□□ -0.8
COL12A1-202ENST00000345356 IGHV2OR16-5A0A0B4J2B6 119 aa10.05□□□□□ -0.8
COL12A1-202ENST00000345356 A0A0G2JRQ6 117 aa10.05□□□□□ -0.8
COL12A1-202ENST00000345356 K7EP34 96 aa10.05□□□□□ -0.8
COL12A1-202ENST00000345356 FAM159AQ6UWV7 190 aa10.05□□□□□ -0.8
COL12A1-202ENST00000345356 ASXL3Q9C0F0 2248 aa10.05□□□□□ -0.8
COL12A1-202ENST00000345356 CD300EQ496F6 205 aaPredicted RBP10.05□□□□□ -0.8
COL12A1-202ENST00000345356 MRPL20Q9BYC9 149 aaKnown RBP10.05□□□□□ -0.8
COL12A1-202ENST00000345356 SAA2-SAA4A0A096LPE2 208 aa10.05□□□□□ -0.8
COL12A1-202ENST00000345356 SAA2P0DJI9 122 aaPredicted RBP10.05□□□□□ -0.8
COL12A1-202ENST00000345356 MDC1Q14676 2089 aaKnown RBP10.05□□□□□ -0.8
COL12A1-202ENST00000345356 FABP5P3A8MUU1 101 aa10.05□□□□□ -0.8
COL12A1-202ENST00000345356 C21orf140B9A014 251 aa10.05□□□□□ -0.8
COL12A1-202ENST00000345356 PCOLCEQ15113 449 aa10.05□□□□□ -0.8
COL12A1-202ENST00000345356 IGHV3-23P01764 117 aa10.05□□□□□ -0.8
COL12A1-202ENST00000345356 DUTP33316 252 aaKnown RBP10.05□□□□□ -0.8
COL12A1-202ENST00000345356 DOCK4Q8N1I0 1966 aa10.05□□□□□ -0.8
COL12A1-202ENST00000345356 FREM3P0C091 2139 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms