RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 NUPL2O15504 423 aaKnown RBP10.77□□□□□ -0.69
HMGN3-202ENST00000344726 SUPT4H1P63272 117 aaKnown RBP10.77□□□□□ -0.69
HMGN3-202ENST00000344726 MLANAQ16655 118 aa10.77□□□□□ -0.69
HMGN3-202ENST00000344726 BSXQ3C1V8 233 aa10.77□□□□□ -0.69
HMGN3-202ENST00000344726 PYDC2Q56P42 97 aa10.77□□□□□ -0.69
HMGN3-202ENST00000344726 ZFAND6Q6FIF0 208 aa10.77□□□□□ -0.69
HMGN3-202ENST00000344726 RBPMS2Q6ZRY4 209 aaKnown RBP10.77□□□□□ -0.69
HMGN3-202ENST00000344726 SLC16A13Q7RTY0 426 aa10.77□□□□□ -0.69
HMGN3-202ENST00000344726 CCDC190Q86UF4 302 aa10.77□□□□□ -0.69
HMGN3-202ENST00000344726 GALNT14Q96FL9 552 aa10.77□□□□□ -0.69
HMGN3-202ENST00000344726 OR10C1Q96KK4 312 aa10.77□□□□□ -0.69
HMGN3-202ENST00000344726 HIPK2Q9H2X6 1198 aa10.77□□□□□ -0.69
HMGN3-202ENST00000344726 FNDC4Q9H6D8 234 aaPredicted RBP10.77□□□□□ -0.69
HMGN3-202ENST00000344726 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.77□□□□□ -0.69
HMGN3-202ENST00000344726 CACNG5Q9UF02 275 aa10.77□□□□□ -0.69
HMGN3-202ENST00000344726 PLECQ15149 4684 aaKnown RBP10.77□□□□□ -0.69
HMGN3-202ENST00000344726 TSPAN4O14817 238 aa10.76□□□□□ -0.69
HMGN3-202ENST00000344726 GNG7O60262 68 aa10.76□□□□□ -0.69
HMGN3-202ENST00000344726 LYL1P12980 280 aa10.76□□□□□ -0.69
HMGN3-202ENST00000344726 SPCS3P61009 180 aa10.76□□□□□ -0.69
HMGN3-202ENST00000344726 RELQ04864 619 aaPredicted RBP10.76□□□□□ -0.69
HMGN3-202ENST00000344726 OR52E5Q8NH55 327 aa10.76□□□□□ -0.69
HMGN3-202ENST00000344726 EPPK1P58107 5090 aaKnown RBP10.76□□□□□ -0.69
HMGN3-202ENST00000344726 IGHV3-49A0A0A0MS15 119 aa10.75□□□□□ -0.69
HMGN3-202ENST00000344726 IGHV7-4-1A0A0J9YVY3 117 aa10.75□□□□□ -0.69
HMGN3-202ENST00000344726 ZNF701M0R085 212 aaPredicted RBP10.75□□□□□ -0.69
HMGN3-202ENST00000344726 CHEK1O14757 476 aa10.75□□□□□ -0.69
HMGN3-202ENST00000344726 YIF1AO95070 293 aa10.75□□□□□ -0.69
HMGN3-202ENST00000344726 NXPH3O95157 252 aa10.75□□□□□ -0.69
HMGN3-202ENST00000344726 TMEM50AO95807 157 aa10.75□□□□□ -0.69
HMGN3-202ENST00000344726 AKR1C4P17516 323 aa10.75□□□□□ -0.69
HMGN3-202ENST00000344726 DUSP18Q8NEJ0 188 aa10.75□□□□□ -0.69
HMGN3-202ENST00000344726 IL22RA2Q969J5 263 aa10.75□□□□□ -0.69
HMGN3-202ENST00000344726 SPAG8Q99932 426 aaPredicted RBP10.75□□□□□ -0.69
HMGN3-202ENST00000344726 ENY2Q9NPA8 101 aa10.75□□□□□ -0.69
HMGN3-202ENST00000344726 SMPXQ9UHP9 88 aa10.75□□□□□ -0.69
HMGN3-202ENST00000344726 IGHV3OR16-13A0A075B7E8 117 aa10.74□□□□□ -0.69
HMGN3-202ENST00000344726 IGHV3-74A0A0B4J1X5 117 aa10.74□□□□□ -0.69
HMGN3-202ENST00000344726 S100A5P33763 92 aa10.74□□□□□ -0.69
HMGN3-202ENST00000344726 NPBWR1P48145 328 aa10.74□□□□□ -0.69
HMGN3-202ENST00000344726 SUB1P53999 127 aaKnown RBP eCLIP10.74□□□□□ -0.69
HMGN3-202ENST00000344726 ANKRD55Q3KP44 614 aa10.74□□□□□ -0.69
HMGN3-202ENST00000344726 NMSQ5H8A3 153 aa10.74□□□□□ -0.69
HMGN3-202ENST00000344726 TOMM20LQ6UXN7 152 aa10.74□□□□□ -0.69
HMGN3-202ENST00000344726 LYZL2Q7Z4W2 148 aa10.74□□□□□ -0.69
HMGN3-202ENST00000344726 TOMM5Q8N4H5 51 aa10.74□□□□□ -0.69
HMGN3-202ENST00000344726 TMEM170AQ8WVE7 144 aa10.74□□□□□ -0.69
HMGN3-202ENST00000344726 SCGB3A2Q96PL1 93 aa10.74□□□□□ -0.69
HMGN3-202ENST00000344726 RNF2Q99496 336 aa10.74□□□□□ -0.69
HMGN3-202ENST00000344726 RHPN1-AS1Q9BWJ2 59 aa10.74□□□□□ -0.69
HMGN3-202ENST00000344726 UBQLN2Q9UHD9 624 aa10.74□□□□□ -0.69
HMGN3-202ENST00000344726 KCNIP3Q9Y2W7 256 aa10.74□□□□□ -0.69
HMGN3-202ENST00000344726 A0A1B0GU03 582 aa10.73□□□□□ -0.69
HMGN3-202ENST00000344726 CORTO00230 105 aa10.73□□□□□ -0.69
HMGN3-202ENST00000344726 OPRK1P41145 380 aa10.73□□□□□ -0.69
HMGN3-202ENST00000344726 ODF3L2Q3SX64 289 aa10.73□□□□□ -0.69
HMGN3-202ENST00000344726 LAMTOR1Q6IAA8 161 aa10.73□□□□□ -0.69
HMGN3-202ENST00000344726 TMEM116Q8NCL8 245 aa10.73□□□□□ -0.69
HMGN3-202ENST00000344726 SRRQ9GZT4 340 aa10.73□□□□□ -0.69
HMGN3-202ENST00000344726 HEYLQ9NQ87 328 aaPredicted RBP10.73□□□□□ -0.69
HMGN3-202ENST00000344726 TRAV14DV4A0A0A6YYC5 116 aa10.72□□□□□ -0.69
HMGN3-202ENST00000344726 A0A0B4J2A0 478 aa10.72□□□□□ -0.69
HMGN3-202ENST00000344726 CEBPZOSA8MTT3 80 aa10.72□□□□□ -0.69
HMGN3-202ENST00000344726 CLN5O75503 358 aa10.72□□□□□ -0.69
HMGN3-202ENST00000344726 APOHP02749 345 aaPredicted RBP10.72□□□□□ -0.69
HMGN3-202ENST00000344726 SULT1A3P0DMM9 295 aa10.72□□□□□ -0.69
HMGN3-202ENST00000344726 SULT1A4P0DMN0 295 aa10.72□□□□□ -0.69
HMGN3-202ENST00000344726 FAUP35544 74 aaKnown RBP10.72□□□□□ -0.69
HMGN3-202ENST00000344726 HTR2BP41595 481 aa10.72□□□□□ -0.69
HMGN3-202ENST00000344726 AP3S2P59780 193 aa10.72□□□□□ -0.69
HMGN3-202ENST00000344726 C2orf83Q53S99 150 aa10.72□□□□□ -0.69
HMGN3-202ENST00000344726 FAM90A2PQ658T7 463 aa10.72□□□□□ -0.69
HMGN3-202ENST00000344726 ZNF600Q6ZNG1 722 aa10.72□□□□□ -0.69
HMGN3-202ENST00000344726 TMED4Q7Z7H5 227 aa10.72□□□□□ -0.69
HMGN3-202ENST00000344726 LILRB2Q8N423 598 aa10.72□□□□□ -0.69
HMGN3-202ENST00000344726 OR4X1Q8NH49 305 aa10.72□□□□□ -0.69
HMGN3-202ENST00000344726 SHPKQ9UHJ6 478 aa10.72□□□□□ -0.69
HMGN3-202ENST00000344726 PUS1Q9Y606 427 aaKnown RBP eCLIP10.72□□□□□ -0.69
HMGN3-202ENST00000344726 AGRNO00468 2067 aa10.72□□□□□ -0.69
HMGN3-202ENST00000344726 SLC24A4Q8NFF2 622 aa10.71□□□□□ -0.69
HMGN3-202ENST00000344726 ST8SIA2Q92186 375 aa10.71□□□□□ -0.69
HMGN3-202ENST00000344726 GGTLC1Q9BX51 225 aa10.71□□□□□ -0.69
HMGN3-202ENST00000344726 IGKV3-7A0A075B6H7 116 aa10.7□□□□□ -0.7
HMGN3-202ENST00000344726 LOC102724200A0A096LPH7 203 aaPredicted RBP10.7□□□□□ -0.7
HMGN3-202ENST00000344726 IGKV1-17P01599 117 aa10.7□□□□□ -0.7
HMGN3-202ENST00000344726 CCR6P51684 374 aa10.7□□□□□ -0.7
HMGN3-202ENST00000344726 TNFRSF9Q07011 255 aa10.7□□□□□ -0.7
HMGN3-202ENST00000344726 SMCO1Q147U7 214 aa10.7□□□□□ -0.7
HMGN3-202ENST00000344726 BAK1Q16611 211 aa10.7□□□□□ -0.7
HMGN3-202ENST00000344726 TIGITQ495A1 244 aa10.7□□□□□ -0.7
HMGN3-202ENST00000344726 TMEM128Q5BJH2 165 aa10.7□□□□□ -0.7
HMGN3-202ENST00000344726 PRSS54Q6PEW0 395 aa10.7□□□□□ -0.7
HMGN3-202ENST00000344726 LGI3Q8N145 548 aa10.7□□□□□ -0.7
HMGN3-202ENST00000344726 SDHCQ99643 169 aaPredicted RBP10.7□□□□□ -0.7
HMGN3-202ENST00000344726 GINS3Q9BRX5 216 aa10.7□□□□□ -0.7
HMGN3-202ENST00000344726 VSIRQ9H7M9 311 aa10.7□□□□□ -0.7
HMGN3-202ENST00000344726 HSPB7Q9UBY9 170 aa10.7□□□□□ -0.7
HMGN3-202ENST00000344726 ALMS1Q8TCU4 4167 aa10.69□□□□□ -0.7
HMGN3-202ENST00000344726 IGHV3-66A0A0C4DH42 116 aa10.69□□□□□ -0.7
HMGN3-202ENST00000344726 LCE6AA0A183 80 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms