RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 SPATA25Q9BR10 227 aa12.09□□□□□ -0.47
ATG4B-201ENST00000344376 C15orf62A8K5M9 175 aa12.09□□□□□ -0.47
ATG4B-201ENST00000344376 OR11H12B2RN74 326 aa12.09□□□□□ -0.47
ATG4B-201ENST00000344376 K7EMT4 169 aa12.09□□□□□ -0.47
ATG4B-201ENST00000344376 CTSGP08311 255 aa12.09□□□□□ -0.47
ATG4B-201ENST00000344376 ANXA3P12429 323 aa12.09□□□□□ -0.47
ATG4B-201ENST00000344376 NPBWR1P48145 328 aa12.09□□□□□ -0.47
ATG4B-201ENST00000344376 HAGHQ16775 308 aa12.09□□□□□ -0.47
ATG4B-201ENST00000344376 LAMTOR1Q6IAA8 161 aa12.09□□□□□ -0.47
ATG4B-201ENST00000344376 OR52E5Q8NH55 327 aa12.09□□□□□ -0.47
ATG4B-201ENST00000344376 LHFPL5Q8TAF8 219 aa12.09□□□□□ -0.47
ATG4B-201ENST00000344376 IL22RA2Q969J5 263 aa12.09□□□□□ -0.47
ATG4B-201ENST00000344376 GALNT14Q96FL9 552 aa12.09□□□□□ -0.47
ATG4B-201ENST00000344376 CACNG5Q9UF02 275 aa12.09□□□□□ -0.47
ATG4B-201ENST00000344376 CACFD1Q9UGQ2 172 aa12.09□□□□□ -0.47
ATG4B-201ENST00000344376 TMEM56-RWDD3S4R434 201 aa12.09□□□□□ -0.47
ATG4B-201ENST00000344376 CENPXA8MT69 81 aa12.08□□□□□ -0.48
ATG4B-201ENST00000344376 YIF1AO95070 293 aa12.08□□□□□ -0.48
ATG4B-201ENST00000344376 KLF9Q13886 244 aaPredicted RBP12.08□□□□□ -0.48
ATG4B-201ENST00000344376 AKAP14Q86UN6 197 aa12.08□□□□□ -0.48
ATG4B-201ENST00000344376 DEFB125Q8N687 156 aa12.08□□□□□ -0.48
ATG4B-201ENST00000344376 SRD5A3Q9H8P0 318 aa12.08□□□□□ -0.48
ATG4B-201ENST00000344376 TENM3Q9P273 2699 aa12.08□□□□□ -0.48
ATG4B-201ENST00000344376 PIGBOS1A0A0B4J2F0 54 aa12.07□□□□□ -0.48
ATG4B-201ENST00000344376 FAM240BA0A1B0GVZ2 78 aa12.07□□□□□ -0.48
ATG4B-201ENST00000344376 SCGB2A1O75556 95 aa12.07□□□□□ -0.48
ATG4B-201ENST00000344376 IGHV3-48P01763 117 aa12.07□□□□□ -0.48
ATG4B-201ENST00000344376 RNASE2P10153 161 aaKnown RBP12.07□□□□□ -0.48
ATG4B-201ENST00000344376 AKR1C4P17516 323 aa12.07□□□□□ -0.48
ATG4B-201ENST00000344376 SRPXP78539 464 aa12.07□□□□□ -0.48
ATG4B-201ENST00000344376 AARDQ4LEZ3 155 aa12.07□□□□□ -0.48
ATG4B-201ENST00000344376 Q6ZRM9 215 aa12.07□□□□□ -0.48
ATG4B-201ENST00000344376 SPAG8Q99932 426 aaPredicted RBP12.07□□□□□ -0.48
ATG4B-201ENST00000344376 MARVELD1Q9BSK0 173 aa12.07□□□□□ -0.48
ATG4B-201ENST00000344376 IGHV3OR16-8A0A075B7F1 116 aa12.06□□□□□ -0.48
ATG4B-201ENST00000344376 ZNF207O43670 478 aaKnown RBP12.06□□□□□ -0.48
ATG4B-201ENST00000344376 HTR2BP41595 481 aa12.06□□□□□ -0.48
ATG4B-201ENST00000344376 TMEM187Q14656 261 aa12.06□□□□□ -0.48
ATG4B-201ENST00000344376 TMEM230Q96A57 120 aa12.06□□□□□ -0.48
ATG4B-201ENST00000344376 GPR146Q96CH1 333 aa12.06□□□□□ -0.48
ATG4B-201ENST00000344376 HEYLQ9NQ87 328 aaPredicted RBP12.06□□□□□ -0.48
ATG4B-201ENST00000344376 STAB2Q8WWQ8 2551 aa12.06□□□□□ -0.48
ATG4B-201ENST00000344376 LINC00854A0A1B0GVQ3 168 aa12.05□□□□□ -0.48
ATG4B-201ENST00000344376 CEBPZOSA8MTT3 80 aa12.05□□□□□ -0.48
ATG4B-201ENST00000344376 SULT1A3P0DMM9 295 aa12.05□□□□□ -0.48
ATG4B-201ENST00000344376 SULT1A4P0DMN0 295 aa12.05□□□□□ -0.48
ATG4B-201ENST00000344376 OPRK1P41145 380 aa12.05□□□□□ -0.48
ATG4B-201ENST00000344376 PVRIGQ6DKI7 326 aa12.05□□□□□ -0.48
ATG4B-201ENST00000344376 LGI3Q8N145 548 aa12.05□□□□□ -0.48
ATG4B-201ENST00000344376 GINS3Q9BRX5 216 aa12.05□□□□□ -0.48
ATG4B-201ENST00000344376 WFDC10AQ9H1F0 79 aa12.05□□□□□ -0.48
ATG4B-201ENST00000344376 A0A0B4J2A0 478 aa12.05□□□□□ -0.48
ATG4B-201ENST00000344376 RPS10-NUDT3A0A1W2PQS6 291 aa12.05□□□□□ -0.48
ATG4B-201ENST00000344376 NAP1L6A6NFF2 107 aa12.05□□□□□ -0.48
ATG4B-201ENST00000344376 C3orf84H3BNL1 204 aa12.05□□□□□ -0.48
ATG4B-201ENST00000344376 TSPAN4O14817 238 aa12.05□□□□□ -0.48
ATG4B-201ENST00000344376 BMI1P35226 326 aa12.05□□□□□ -0.48
ATG4B-201ENST00000344376 TMED4Q7Z7H5 227 aa12.05□□□□□ -0.48
ATG4B-201ENST00000344376 TMEM116Q8NCL8 245 aa12.05□□□□□ -0.48
ATG4B-201ENST00000344376 OR10C1Q96KK4 312 aa12.05□□□□□ -0.48
ATG4B-201ENST00000344376 SHPKQ9UHJ6 478 aa12.05□□□□□ -0.48
ATG4B-201ENST00000344376 SMPXQ9UHP9 88 aa12.05□□□□□ -0.48
ATG4B-201ENST00000344376 IGHV7-4-1A0A0J9YVY3 117 aa12.04□□□□□ -0.48
ATG4B-201ENST00000344376 CCR6P51684 374 aa12.04□□□□□ -0.48
ATG4B-201ENST00000344376 BSXQ3C1V8 233 aa12.04□□□□□ -0.48
ATG4B-201ENST00000344376 LINC00322Q6ZN03 302 aaPredicted RBP12.04□□□□□ -0.48
ATG4B-201ENST00000344376 ZNF600Q6ZNG1 722 aa12.04□□□□□ -0.48
ATG4B-201ENST00000344376 CITED4Q96RK1 184 aa12.04□□□□□ -0.48
ATG4B-201ENST00000344376 SLC25A21Q9BQT8 299 aaPredicted RBP12.04□□□□□ -0.48
ATG4B-201ENST00000344376 HIPK2Q9H2X6 1198 aa12.04□□□□□ -0.48
ATG4B-201ENST00000344376 PRR13Q9NZ81 148 aa12.04□□□□□ -0.48
ATG4B-201ENST00000344376 TRAV14DV4A0A0A6YYC5 116 aa12.03□□□□□ -0.48
ATG4B-201ENST00000344376 OR4C46A6NHA9 309 aa12.03□□□□□ -0.48
ATG4B-201ENST00000344376 SUPT4H1P63272 117 aaKnown RBP12.03□□□□□ -0.48
ATG4B-201ENST00000344376 NOXA1Q86UR1 476 aa12.03□□□□□ -0.48
ATG4B-201ENST00000344376 SLC24A4Q8NFF2 622 aa12.03□□□□□ -0.48
ATG4B-201ENST00000344376 MUC7Q8TAX7 377 aa12.03□□□□□ -0.48
ATG4B-201ENST00000344376 RHPN1-AS1Q9BWJ2 59 aa12.03□□□□□ -0.48
ATG4B-201ENST00000344376 HUWE1Q7Z6Z7 4374 aaKnown RBP12.03□□□□□ -0.48
ATG4B-201ENST00000344376 RBMY1BA6NDE4 496 aaKnown RBP12.02□□□□□ -0.49
ATG4B-201ENST00000344376 RBMY1EA6NEQ0 496 aaKnown RBP12.02□□□□□ -0.49
ATG4B-201ENST00000344376 RGS13O14921 159 aa12.02□□□□□ -0.49
ATG4B-201ENST00000344376 RBMY1DP0C7P1 496 aaKnown RBP12.02□□□□□ -0.49
ATG4B-201ENST00000344376 BTCP35070 178 aa12.02□□□□□ -0.49
ATG4B-201ENST00000344376 SMCO1Q147U7 214 aa12.02□□□□□ -0.49
ATG4B-201ENST00000344376 C2orf83Q53S99 150 aa12.02□□□□□ -0.49
ATG4B-201ENST00000344376 TMEM128Q5BJH2 165 aa12.02□□□□□ -0.49
ATG4B-201ENST00000344376 OR4X1Q8NH49 305 aa12.02□□□□□ -0.49
ATG4B-201ENST00000344376 DUXBA0A1W2PPF3 345 aa12.01□□□□□ -0.49
ATG4B-201ENST00000344376 CHEK1O14757 476 aa12.01□□□□□ -0.49
ATG4B-201ENST00000344376 CLN5O75503 358 aa12.01□□□□□ -0.49
ATG4B-201ENST00000344376 NXPH3O95157 252 aa12.01□□□□□ -0.49
ATG4B-201ENST00000344376 TMEM50AO95807 157 aa12.01□□□□□ -0.49
ATG4B-201ENST00000344376 VAMP1P23763 118 aa12.01□□□□□ -0.49
ATG4B-201ENST00000344376 NDUFA5Q16718 116 aa12.01□□□□□ -0.49
ATG4B-201ENST00000344376 NMSQ5H8A3 153 aa12.01□□□□□ -0.49
ATG4B-201ENST00000344376 TOMM20LQ6UXN7 152 aa12.01□□□□□ -0.49
ATG4B-201ENST00000344376 LYZL2Q7Z4W2 148 aa12.01□□□□□ -0.49
ATG4B-201ENST00000344376 RNASEH2CQ8TDP1 164 aaKnown RBP12.01□□□□□ -0.49
ATG4B-201ENST00000344376 GGTLC1Q9BX51 225 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms