RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 A0A0U1RRA0 63 aa6.5□□□□□ -1.37
KPNA1-201ENST00000344337 HYPMO75409 117 aa6.5□□□□□ -1.37
KPNA1-201ENST00000344337 RNASE1P07998 156 aaKnown RBP6.5□□□□□ -1.37
KPNA1-201ENST00000344337 TRIP6Q15654 476 aaKnown RBP6.5□□□□□ -1.37
KPNA1-201ENST00000344337 EFNB3Q15768 340 aa6.5□□□□□ -1.37
KPNA1-201ENST00000344337 ZNF324BQ6AW86 544 aaPredicted RBP6.5□□□□□ -1.37
KPNA1-201ENST00000344337 DTX1Q86Y01 620 aa6.5□□□□□ -1.37
KPNA1-201ENST00000344337 LSM10Q969L4 123 aaKnown RBP6.5□□□□□ -1.37
KPNA1-201ENST00000344337 LOXL4Q96JB6 756 aa6.5□□□□□ -1.37
KPNA1-201ENST00000344337 RNF7Q9UBF6 113 aa6.5□□□□□ -1.37
KPNA1-201ENST00000344337 RABAC1Q9UI14 185 aa6.5□□□□□ -1.37
KPNA1-201ENST00000344337 CECR9P0C854 216 aa6.49□□□□□ -1.37
KPNA1-201ENST00000344337 C8orf88P0DMB2 117 aa6.49□□□□□ -1.37
KPNA1-201ENST00000344337 EMP1P54849 157 aa6.49□□□□□ -1.37
KPNA1-201ENST00000344337 DUX4L9Q6RFH8 374 aaPredicted RBP6.49□□□□□ -1.37
KPNA1-201ENST00000344337 P2RX4Q99571 388 aa6.49□□□□□ -1.37
KPNA1-201ENST00000344337 MYO9AB2RTY4 2548 aa6.49□□□□□ -1.37
KPNA1-201ENST00000344337 PLXNA2O75051 1894 aa6.49□□□□□ -1.37
KPNA1-201ENST00000344337 A8MWP6 167 aa6.49□□□□□ -1.37
KPNA1-201ENST00000344337 FBLN7Q53RD9 439 aa6.49□□□□□ -1.37
KPNA1-201ENST00000344337 TPTE2P1Q5T6R2 138 aa6.49□□□□□ -1.37
KPNA1-201ENST00000344337 CIARTQ8N365 385 aaPredicted RBP6.49□□□□□ -1.37
KPNA1-201ENST00000344337 A8MWL6 223 aa6.49□□□□□ -1.37
KPNA1-201ENST00000344337 DLEU1O43261 78 aa6.49□□□□□ -1.37
KPNA1-201ENST00000344337 SPRY2O43597 315 aa6.49□□□□□ -1.37
KPNA1-201ENST00000344337 HSPE1P61604 102 aaKnown RBP6.49□□□□□ -1.37
KPNA1-201ENST00000344337 LINC01551Q86U37 167 aa6.49□□□□□ -1.37
KPNA1-201ENST00000344337 FADS6Q8N9I5 356 aa6.49□□□□□ -1.37
KPNA1-201ENST00000344337 RPUSD1Q9UJJ7 312 aaKnown RBP6.49□□□□□ -1.37
KPNA1-201ENST00000344337 FOXA2Q9Y261 457 aaPredicted RBP6.49□□□□□ -1.37
KPNA1-201ENST00000344337 TMEM108Q6UXF1 575 aa6.49□□□□□ -1.37
KPNA1-201ENST00000344337 PPP1R32Q7Z5V6 425 aa6.49□□□□□ -1.37
KPNA1-201ENST00000344337 NIT1Q86X76 327 aa6.49□□□□□ -1.37
KPNA1-201ENST00000344337 SAP25Q8TEE9 199 aa6.49□□□□□ -1.37
KPNA1-201ENST00000344337 NABP1Q96AH0 204 aa6.49□□□□□ -1.37
KPNA1-201ENST00000344337 GTSF1LQ9H1H1 148 aa6.49□□□□□ -1.37
KPNA1-201ENST00000344337 CLDN16Q9Y5I7 305 aa6.49□□□□□ -1.37
KPNA1-201ENST00000344337 TECTAO75443 2155 aa6.49□□□□□ -1.37
KPNA1-201ENST00000344337 M0R381 172 aa6.49□□□□□ -1.37
KPNA1-201ENST00000344337 IL4P05112 153 aa6.49□□□□□ -1.37
KPNA1-201ENST00000344337 LINC00614P0C842 121 aa6.49□□□□□ -1.37
KPNA1-201ENST00000344337 IGHV1-2P23083 117 aa6.49□□□□□ -1.37
KPNA1-201ENST00000344337 NPC2P61916 151 aa6.49□□□□□ -1.37
KPNA1-201ENST00000344337 LCN2P80188 198 aa6.49□□□□□ -1.37
KPNA1-201ENST00000344337 LY6EQ16553 131 aa6.49□□□□□ -1.37
KPNA1-201ENST00000344337 ZNF788Q6ZQV5 615 aa6.49□□□□□ -1.37
KPNA1-201ENST00000344337 FAM89BQ8N5H3 189 aa6.49□□□□□ -1.37
KPNA1-201ENST00000344337 PRR7Q8TB68 274 aa6.49□□□□□ -1.37
KPNA1-201ENST00000344337 SP7Q8TDD2 431 aaPredicted RBP6.49□□□□□ -1.37
KPNA1-201ENST00000344337 RNF115Q9Y4L5 304 aa6.49□□□□□ -1.37
KPNA1-201ENST00000344337 TMEM45BQ96B21 275 aa6.48□□□□□ -1.37
KPNA1-201ENST00000344337 PERPQ96FX8 193 aa6.48□□□□□ -1.37
KPNA1-201ENST00000344337 SRSF8Q9BRL6 282 aaKnown RBP6.48□□□□□ -1.37
KPNA1-201ENST00000344337 KIAA1549LQ6ZVL6 1849 aa6.48□□□□□ -1.37
KPNA1-201ENST00000344337 CCDC168Q8NDH2 2452 aa6.48□□□□□ -1.37
KPNA1-201ENST00000344337 K7ERU9 68 aa6.48□□□□□ -1.37
KPNA1-201ENST00000344337 SLC25A33Q9BSK2 321 aa6.48□□□□□ -1.37
KPNA1-201ENST00000344337 ZNF503-AS2A6NEH8 195 aa6.48□□□□□ -1.37
KPNA1-201ENST00000344337 NBEAP1P0C6P0 100 aa6.48□□□□□ -1.37
KPNA1-201ENST00000344337 TIMM23BQ5SRD1 257 aa6.48□□□□□ -1.37
KPNA1-201ENST00000344337 STPG4Q8N801 248 aa6.48□□□□□ -1.37
KPNA1-201ENST00000344337 LINC01560Q8TB33 94 aa6.48□□□□□ -1.37
KPNA1-201ENST00000344337 CDX2Q99626 313 aaPredicted RBP6.48□□□□□ -1.37
KPNA1-201ENST00000344337 TMEM70Q9BUB7 260 aa6.48□□□□□ -1.37
KPNA1-201ENST00000344337 MRPL20Q9BYC9 149 aaKnown RBP6.48□□□□□ -1.37
KPNA1-201ENST00000344337 CDC42EP3Q9UKI2 254 aa6.48□□□□□ -1.37
KPNA1-201ENST00000344337 HIGD1AQ9Y241 93 aa6.48□□□□□ -1.37
KPNA1-201ENST00000344337 M0R3E3 92 aa6.48□□□□□ -1.37
KPNA1-201ENST00000344337 C3orf79P0CE67 100 aa6.48□□□□□ -1.37
KPNA1-201ENST00000344337 FAM214BQ7L5A3 538 aa6.48□□□□□ -1.37
KPNA1-201ENST00000344337 RNF166Q96A37 237 aaPredicted RBP6.48□□□□□ -1.37
KPNA1-201ENST00000344337 SMDT1Q9H4I9 107 aa6.48□□□□□ -1.37
KPNA1-201ENST00000344337 NHP2Q9NX24 153 aaKnown RBP6.48□□□□□ -1.37
KPNA1-201ENST00000344337 TMEM189A5PLL7 270 aa6.48□□□□□ -1.37
KPNA1-201ENST00000344337 M0R296 226 aa6.48□□□□□ -1.37
KPNA1-201ENST00000344337 RIGQ13278 110 aa6.48□□□□□ -1.37
KPNA1-201ENST00000344337 OR1N2Q8NGR9 330 aa6.48□□□□□ -1.37
KPNA1-201ENST00000344337 MGST2Q99735 147 aa6.48□□□□□ -1.37
KPNA1-201ENST00000344337 FOXC2Q99958 501 aa6.48□□□□□ -1.37
KPNA1-201ENST00000344337 TMEM56-RWDD3S4R434 201 aa6.48□□□□□ -1.37
KPNA1-201ENST00000344337 TNFRSF1AP19438 455 aa6.47□□□□□ -1.37
KPNA1-201ENST00000344337 TBR1Q16650 682 aa6.47□□□□□ -1.37
KPNA1-201ENST00000344337 ACP7Q6ZNF0 438 aa6.47□□□□□ -1.37
KPNA1-201ENST00000344337 PRNDQ9UKY0 176 aa6.47□□□□□ -1.37
KPNA1-201ENST00000344337 SAA2-SAA4A0A096LPE2 208 aa6.47□□□□□ -1.37
KPNA1-201ENST00000344337 CRYABP02511 175 aaKnown RBP6.47□□□□□ -1.37
KPNA1-201ENST00000344337 SAA2P0DJI9 122 aaPredicted RBP6.47□□□□□ -1.37
KPNA1-201ENST00000344337 RPL27AP46776 148 aaKnown RBP6.47□□□□□ -1.37
KPNA1-201ENST00000344337 TMEM136Q6ZRR5 245 aa6.47□□□□□ -1.37
KPNA1-201ENST00000344337 RELQ04864 619 aaPredicted RBP6.47□□□□□ -1.37
KPNA1-201ENST00000344337 RCHY1Q96PM5 261 aa6.47□□□□□ -1.37
KPNA1-201ENST00000344337 A0A087WWC5 75 aa6.47□□□□□ -1.37
KPNA1-201ENST00000344337 NPIPB13A6NJU9 1138 aa6.47□□□□□ -1.37
KPNA1-201ENST00000344337 NPIPB5A8MRT5 1133 aa6.47□□□□□ -1.37
KPNA1-201ENST00000344337 NPIPB4C9JG80 1138 aa6.47□□□□□ -1.37
KPNA1-201ENST00000344337 NPIPB11E5RHQ5 1161 aa6.47□□□□□ -1.37
KPNA1-201ENST00000344337 ZNF324O75467 553 aaPredicted RBP6.47□□□□□ -1.37
KPNA1-201ENST00000344337 HLA-DQA1P01909 254 aa6.47□□□□□ -1.37
KPNA1-201ENST00000344337 TSPAN7P41732 249 aa6.47□□□□□ -1.37
KPNA1-201ENST00000344337 KIR2DL2P43627 348 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms