RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 MUC7Q8TAX7 377 aa13.64□□□□□ -0.23
USF2-202ENST00000343550 C20orf85Q9H1P6 137 aa13.64□□□□□ -0.23
USF2-202ENST00000343550 RBKSQ9H477 322 aa13.64□□□□□ -0.23
USF2-202ENST00000343550 HUWE1Q7Z6Z7 4374 aaKnown RBP13.63□□□□□ -0.23
USF2-202ENST00000343550 UPK1BO75841 260 aa13.63□□□□□ -0.23
USF2-202ENST00000343550 CBLN1P23435 193 aa13.63□□□□□ -0.23
USF2-202ENST00000343550 TM4SF20Q53R12 229 aa13.63□□□□□ -0.23
USF2-202ENST00000343550 GGNBP1Q5YKI7 109 aa13.63□□□□□ -0.23
USF2-202ENST00000343550 FNDC4Q9H6D8 234 aaPredicted RBP13.63□□□□□ -0.23
USF2-202ENST00000343550 TMEM213A2RRL7 107 aa13.62□□□□□ -0.23
USF2-202ENST00000343550 A8MWP6 167 aa13.62□□□□□ -0.23
USF2-202ENST00000343550 IFITM3Q01628 133 aa13.62□□□□□ -0.23
USF2-202ENST00000343550 ASAH1Q13510 395 aa13.62□□□□□ -0.23
USF2-202ENST00000343550 DUSP18Q8NEJ0 188 aa13.62□□□□□ -0.23
USF2-202ENST00000343550 SLC24A4Q8NFF2 622 aa13.62□□□□□ -0.23
USF2-202ENST00000343550 COQ8AQ8NI60 647 aa13.62□□□□□ -0.23
USF2-202ENST00000343550 DTD1Q8TEA8 209 aa13.62□□□□□ -0.23
USF2-202ENST00000343550 TMEM170AQ8WVE7 144 aa13.62□□□□□ -0.23
USF2-202ENST00000343550 ZNF414Q96IQ9 312 aa13.62□□□□□ -0.23
USF2-202ENST00000343550 ZMAT4Q9H898 229 aa13.62□□□□□ -0.23
USF2-202ENST00000343550 U3KQ87 197 aa13.62□□□□□ -0.23
USF2-202ENST00000343550 TRAV6A0A075B6T7 132 aa13.61□□□□□ -0.23
USF2-202ENST00000343550 FAM240BA0A1B0GVZ2 78 aa13.61□□□□□ -0.23
USF2-202ENST00000343550 NDUFA4O00483 81 aa13.61□□□□□ -0.23
USF2-202ENST00000343550 NUPL2O15504 423 aaKnown RBP13.61□□□□□ -0.23
USF2-202ENST00000343550 ADAP1O75689 374 aa13.61□□□□□ -0.23
USF2-202ENST00000343550 DEFB114Q30KQ6 69 aa13.61□□□□□ -0.23
USF2-202ENST00000343550 CASC10Q5T4H9 136 aa13.61□□□□□ -0.23
USF2-202ENST00000343550 MZT2BQ6NZ67 158 aa13.61□□□□□ -0.23
USF2-202ENST00000343550 OR52B4Q8NGK2 314 aa13.61□□□□□ -0.23
USF2-202ENST00000343550 PALMDQ9NP74 551 aa13.61□□□□□ -0.23
USF2-202ENST00000343550 NUDT15Q9NV35 164 aa13.61□□□□□ -0.23
USF2-202ENST00000343550 IZUMO1RA6ND01 250 aa13.6□□□□□ -0.23
USF2-202ENST00000343550 FAM90A26D6RGX4 464 aa13.6□□□□□ -0.23
USF2-202ENST00000343550 GNG7O60262 68 aa13.6□□□□□ -0.23
USF2-202ENST00000343550 TMEM50AO95807 157 aa13.6□□□□□ -0.23
USF2-202ENST00000343550 C8orf88P0DMB2 117 aa13.6□□□□□ -0.23
USF2-202ENST00000343550 OPRK1P41145 380 aa13.6□□□□□ -0.23
USF2-202ENST00000343550 NPBWR1P48145 328 aa13.6□□□□□ -0.23
USF2-202ENST00000343550 ELLP55199 621 aaPredicted RBP13.6□□□□□ -0.23
USF2-202ENST00000343550 UXS1Q8NBZ7 420 aa13.6□□□□□ -0.23
USF2-202ENST00000343550 MITD1Q8WV92 249 aa13.6□□□□□ -0.23
USF2-202ENST00000343550 CACNG8Q8WXS5 425 aa13.6□□□□□ -0.23
USF2-202ENST00000343550 MRPL36Q9P0J6 103 aaKnown RBP13.6□□□□□ -0.23
USF2-202ENST00000343550 UFC1Q9Y3C8 167 aa13.6□□□□□ -0.23
USF2-202ENST00000343550 MPTX1A8MV57 137 aa13.59□□□□□ -0.23
USF2-202ENST00000343550 IFNA10P01566 189 aa13.59□□□□□ -0.23
USF2-202ENST00000343550 NPY1RP25929 384 aa13.59□□□□□ -0.23
USF2-202ENST00000343550 CD300EQ496F6 205 aaPredicted RBP13.59□□□□□ -0.23
USF2-202ENST00000343550 NOXA1Q86UR1 476 aa13.59□□□□□ -0.23
USF2-202ENST00000343550 Q8N1Y9 231 aa13.59□□□□□ -0.23
USF2-202ENST00000343550 OR2K2Q8NGT1 345 aa13.59□□□□□ -0.23
USF2-202ENST00000343550 RNASEH2CQ8TDP1 164 aaKnown RBP13.59□□□□□ -0.23
USF2-202ENST00000343550 TMEM190Q8WZ59 177 aa13.59□□□□□ -0.23
USF2-202ENST00000343550 TECRQ9NZ01 308 aaKnown RBP13.59□□□□□ -0.23
USF2-202ENST00000343550 H2AFB2P0C5Z0 115 aa13.59□□□□□ -0.23
USF2-202ENST00000343550 IGHV4-30-4P0DP06 118 aa13.59□□□□□ -0.23
USF2-202ENST00000343550 RELQ04864 619 aaPredicted RBP13.59□□□□□ -0.23
USF2-202ENST00000343550 LCN12Q6JVE5 192 aa13.59□□□□□ -0.23
USF2-202ENST00000343550 OR4X1Q8NH49 305 aa13.59□□□□□ -0.23
USF2-202ENST00000343550 MRPL27Q9P0M9 148 aaKnown RBP13.59□□□□□ -0.23
USF2-202ENST00000343550 K7EMT4 169 aa13.58□□□□□ -0.24
USF2-202ENST00000343550 IFNA21P01568 189 aa13.58□□□□□ -0.24
USF2-202ENST00000343550 ATP5IP56385 69 aaPredicted RBP13.58□□□□□ -0.24
USF2-202ENST00000343550 ID3Q02535 119 aa13.58□□□□□ -0.24
USF2-202ENST00000343550 DYNLRB2Q8TF09 96 aa13.58□□□□□ -0.24
USF2-202ENST00000343550 MARC2Q969Z3 335 aa13.58□□□□□ -0.24
USF2-202ENST00000343550 MLXQ9UH92 298 aa13.58□□□□□ -0.24
USF2-202ENST00000343550 IGHV3OR16-8A0A075B7F1 116 aa13.57□□□□□ -0.24
USF2-202ENST00000343550 RPS10-NUDT3A0A1W2PQS6 291 aa13.57□□□□□ -0.24
USF2-202ENST00000343550 ZNF785A8K8V0 405 aa13.57□□□□□ -0.24
USF2-202ENST00000343550 CLN5O75503 358 aa13.57□□□□□ -0.24
USF2-202ENST00000343550 MED6O75586 246 aa13.57□□□□□ -0.24
USF2-202ENST00000343550 TM2D3Q9BRN9 247 aa13.57□□□□□ -0.24
USF2-202ENST00000343550 C20orf24Q9BUV8 137 aa13.57□□□□□ -0.24
USF2-202ENST00000343550 MAGT1Q9H0U3 335 aa13.57□□□□□ -0.24
USF2-202ENST00000343550 DAZ1Q9NQZ3 744 aaKnown RBP13.57□□□□□ -0.24
USF2-202ENST00000343550 C19orf73Q9NVV2 129 aa13.57□□□□□ -0.24
USF2-202ENST00000343550 SELENOKQ9Y6D0 94 aa13.57□□□□□ -0.24
USF2-202ENST00000343550 C15orf62A8K5M9 175 aa13.56□□□□□ -0.24
USF2-202ENST00000343550 A8MZ25 164 aa13.56□□□□□ -0.24
USF2-202ENST00000343550 SYNGR2O43760 224 aa13.56□□□□□ -0.24
USF2-202ENST00000343550 IAPPP10997 89 aa13.56□□□□□ -0.24
USF2-202ENST00000343550 LYL1P12980 280 aa13.56□□□□□ -0.24
USF2-202ENST00000343550 PRSS54Q6PEW0 395 aa13.56□□□□□ -0.24
USF2-202ENST00000343550 OR10C1Q96KK4 312 aa13.56□□□□□ -0.24
USF2-202ENST00000343550 CITED4Q96RK1 184 aa13.56□□□□□ -0.24
USF2-202ENST00000343550 YIF1AO95070 293 aa13.55□□□□□ -0.24
USF2-202ENST00000343550 SLC25A4P12235 298 aa13.55□□□□□ -0.24
USF2-202ENST00000343550 ETFRF1Q6IPR1 90 aa13.55□□□□□ -0.24
USF2-202ENST00000343550 TMEM116Q8NCL8 245 aa13.55□□□□□ -0.24
USF2-202ENST00000343550 OR4D5Q8NGN0 318 aa13.55□□□□□ -0.24
USF2-202ENST00000343550 ZNF431Q8TF32 576 aaPredicted RBP13.55□□□□□ -0.24
USF2-202ENST00000343550 SEC22CQ9BRL7 303 aa13.55□□□□□ -0.24
USF2-202ENST00000343550 TRAV30A0A087WSZ9 112 aa13.54□□□□□ -0.24
USF2-202ENST00000343550 ZNF207O43670 478 aaKnown RBP13.54□□□□□ -0.24
USF2-202ENST00000343550 IFNA4P05014 189 aa13.54□□□□□ -0.24
USF2-202ENST00000343550 TOMM20LQ6UXN7 152 aa13.54□□□□□ -0.24
USF2-202ENST00000343550 ZNF600Q6ZNG1 722 aa13.54□□□□□ -0.24
USF2-202ENST00000343550 CIB3Q96Q77 187 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms