RNA–Protein interactions for RNA: ENST00000341037.8

TNC-201, Transcript of tenascin C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNC, Length 6,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-201ENST00000341037 TYMSP04818 313 aa9.47□□□□□ -0.89
TNC-201ENST00000341037 SIGLEC15Q6ZMC9 328 aa9.47□□□□□ -0.89
TNC-201ENST00000341037 VGLL1Q99990 258 aa9.47□□□□□ -0.89
TNC-201ENST00000341037 IGHV3-73A0A0B4J1V6 119 aa9.46□□□□□ -0.89
TNC-201ENST00000341037 PSMG4Q5JS54 123 aa9.46□□□□□ -0.89
TNC-201ENST00000341037 A0A0A6YYD4 124 aa9.46□□□□□ -0.89
TNC-201ENST00000341037 ZNF815PA8K554 130 aa9.46□□□□□ -0.89
TNC-201ENST00000341037 FXYD7P58549 80 aa9.46□□□□□ -0.89
TNC-201ENST00000341037 TMEM95Q3KNT9 176 aa9.46□□□□□ -0.89
TNC-201ENST00000341037 PVRIGQ6DKI7 326 aa9.46□□□□□ -0.89
TNC-201ENST00000341037 E9PLN8 166 aa9.46□□□□□ -0.89
TNC-201ENST00000341037 VKORC1Q9BQB6 163 aa9.46□□□□□ -0.89
TNC-201ENST00000341037 LOC102723996A0A087X1L8 192 aa9.46□□□□□ -0.9
TNC-201ENST00000341037 ZFP36L1Q07352 338 aaKnown RBP9.46□□□□□ -0.9
TNC-201ENST00000341037 A0A1B0GV90 55 aa9.46□□□□□ -0.9
TNC-201ENST00000341037 TTC9CQ8N5M4 171 aa9.46□□□□□ -0.9
TNC-201ENST00000341037 IGLV3-12A0A075B6K2 115 aa9.45□□□□□ -0.9
TNC-201ENST00000341037 CSRP1P21291 193 aaKnown RBP9.45□□□□□ -0.9
TNC-201ENST00000341037 PAX8Q06710 450 aa9.45□□□□□ -0.9
TNC-201ENST00000341037 FABP5P3A8MUU1 101 aa9.45□□□□□ -0.9
TNC-201ENST00000341037 TBX6O95947 436 aaPredicted RBP9.45□□□□□ -0.9
TNC-201ENST00000341037 SLC50A1Q9BRV3 221 aa9.45□□□□□ -0.9
TNC-201ENST00000341037 VCX2Q9H322 139 aa9.45□□□□□ -0.9
TNC-201ENST00000341037 PRR31Q5SQ13 230 aa9.45□□□□□ -0.9
TNC-201ENST00000341037 LCTP09848 1927 aa9.45□□□□□ -0.9
TNC-201ENST00000341037 IGKV1-9A0A0C4DH69 117 aa9.45□□□□□ -0.9
TNC-201ENST00000341037 IFI27P40305 119 aaPredicted RBP9.45□□□□□ -0.9
TNC-201ENST00000341037 ERVK11-1P61568 191 aa9.45□□□□□ -0.9
TNC-201ENST00000341037 TRAV5A0A0B4J249 113 aa9.45□□□□□ -0.9
TNC-201ENST00000341037 SFTA2Q6UW10 78 aa9.45□□□□□ -0.9
TNC-201ENST00000341037 IGKV2-40A0A087WW87 121 aaPredicted RBP9.45□□□□□ -0.9
TNC-201ENST00000341037 IGKV2D-40P01614 121 aaPredicted RBP9.45□□□□□ -0.9
TNC-201ENST00000341037 C1QTNF9P0C862 333 aa9.45□□□□□ -0.9
TNC-201ENST00000341037 CD28P10747 220 aa9.45□□□□□ -0.9
TNC-201ENST00000341037 ZNF672Q499Z4 452 aaPredicted RBP9.45□□□□□ -0.9
TNC-201ENST00000341037 OR9G4Q8NGQ1 327 aa9.45□□□□□ -0.9
TNC-201ENST00000341037 IGHV2-26A0A0B4J1V2 119 aa9.44□□□□□ -0.9
TNC-201ENST00000341037 DUSP14O95147 198 aaKnown RBP9.44□□□□□ -0.9
TNC-201ENST00000341037 RPL35AP18077 110 aaKnown RBP9.44□□□□□ -0.9
TNC-201ENST00000341037 RPL15P61313 204 aaKnown RBP9.44□□□□□ -0.9
TNC-201ENST00000341037 DEFB121Q5J5C9 76 aa9.44□□□□□ -0.9
TNC-201ENST00000341037 TMEM144Q7Z5S9 345 aa9.44□□□□□ -0.9
TNC-201ENST00000341037 EPDR1Q9UM22 224 aa9.44□□□□□ -0.9
TNC-201ENST00000341037 GREB1Q4ZG55 1949 aa9.44□□□□□ -0.9
TNC-201ENST00000341037 TRAV41A0A0B4J266 112 aa9.44□□□□□ -0.9
TNC-201ENST00000341037 TRAV21A0A0B4J279 112 aa9.44□□□□□ -0.9
TNC-201ENST00000341037 FOXG1P55316 489 aaPredicted RBP9.44□□□□□ -0.9
TNC-201ENST00000341037 PEF1Q9UBV8 284 aaKnown RBP9.44□□□□□ -0.9
TNC-201ENST00000341037 ZNF257Q9Y2Q1 563 aa9.44□□□□□ -0.9
TNC-201ENST00000341037 A0A0G2JMZ2 1700 aa9.44□□□□□ -0.9
TNC-201ENST00000341037 LRRC37A2A6NM11 1700 aa9.44□□□□□ -0.9
TNC-201ENST00000341037 SRSF6Q13247 344 aaKnown RBP9.44□□□□□ -0.9
TNC-201ENST00000341037 ASCL2Q99929 193 aa9.44□□□□□ -0.9
TNC-201ENST00000341037 ZNF319Q9P2F9 582 aa9.44□□□□□ -0.9
TNC-201ENST00000341037 SCN5AQ14524 2016 aa9.44□□□□□ -0.9
TNC-201ENST00000341037 RPL23P62829 140 aaKnown RBP9.44□□□□□ -0.9
TNC-201ENST00000341037 TMEM200BQ69YZ2 307 aa9.44□□□□□ -0.9
TNC-201ENST00000341037 ZNF600Q6ZNG1 722 aa9.44□□□□□ -0.9
TNC-201ENST00000341037 A0A1B0GW15 77 aa9.44□□□□□ -0.9
TNC-201ENST00000341037 PRR32B1ATL7 298 aa9.44□□□□□ -0.9
TNC-201ENST00000341037 SELLP14151 372 aa9.44□□□□□ -0.9
TNC-201ENST00000341037 SRSF7Q16629 238 aaKnown RBP eCLIP9.44□□□□□ -0.9
TNC-201ENST00000341037 PAQR4Q8N4S7 273 aaPredicted RBP9.44□□□□□ -0.9
TNC-201ENST00000341037 OR5A1Q8NGJ0 315 aa9.44□□□□□ -0.9
TNC-201ENST00000341037 DOCK4Q8N1I0 1966 aa9.43□□□□□ -0.9
TNC-201ENST00000341037 RNF222A6NCQ9 220 aa9.43□□□□□ -0.9
TNC-201ENST00000341037 LINC00271P0C7V0 271 aa9.43□□□□□ -0.9
TNC-201ENST00000341037 SRSF3P84103 164 aaKnown RBP9.43□□□□□ -0.9
TNC-201ENST00000341037 CFHR1Q03591 330 aa9.43□□□□□ -0.9
TNC-201ENST00000341037 SAMD13Q5VXD3 122 aa9.43□□□□□ -0.9
TNC-201ENST00000341037 BRD3OSQ6XYD6 125 aa9.43□□□□□ -0.9
TNC-201ENST00000341037 SLC25A28Q96A46 364 aa9.43□□□□□ -0.9
TNC-201ENST00000341037 PSG8Q9UQ74 426 aa9.43□□□□□ -0.9
TNC-201ENST00000341037 RIPPLY3P57055 190 aa9.43□□□□□ -0.9
TNC-201ENST00000341037 NPC2P61916 151 aa9.43□□□□□ -0.9
TNC-201ENST00000341037 Q6AWC8 147 aa9.43□□□□□ -0.9
TNC-201ENST00000341037 NEUROG1Q92886 237 aa9.43□□□□□ -0.9
TNC-201ENST00000341037 DMRT1Q9Y5R6 373 aa9.43□□□□□ -0.9
TNC-201ENST00000341037 GREB1LQ9C091 1923 aaPredicted RBP9.43□□□□□ -0.9
TNC-201ENST00000341037 A0A1B0GWB2 263 aa9.43□□□□□ -0.9
TNC-201ENST00000341037 ADARB2-AS1A8MUL3 147 aa9.43□□□□□ -0.9
TNC-201ENST00000341037 MDC1Q14676 2089 aaKnown RBP9.43□□□□□ -0.9
TNC-201ENST00000341037 A0A0U1RRA0 63 aa9.43□□□□□ -0.9
TNC-201ENST00000341037 C1QL4Q86Z23 238 aa9.43□□□□□ -0.9
TNC-201ENST00000341037 FAM89BQ8N5H3 189 aa9.43□□□□□ -0.9
TNC-201ENST00000341037 TRAV2A0A0B4J234 112 aa9.43□□□□□ -0.9
TNC-201ENST00000341037 NTN3O00634 580 aaPredicted RBP9.43□□□□□ -0.9
TNC-201ENST00000341037 LYPD3O95274 346 aa9.43□□□□□ -0.9
TNC-201ENST00000341037 TRGV11A0A075B6L2 103 aa9.42□□□□□ -0.9
TNC-201ENST00000341037 PGPEP1LA6NFU8 196 aa9.42□□□□□ -0.9
TNC-201ENST00000341037 ZNF688P0C7X2 276 aa9.42□□□□□ -0.9
TNC-201ENST00000341037 GZMBP10144 247 aa9.42□□□□□ -0.9
TNC-201ENST00000341037 COQ2Q96H96 371 aa9.42□□□□□ -0.9
TNC-201ENST00000341037 SEPSECSQ9HD40 501 aaKnown RBP9.42□□□□□ -0.9
TNC-201ENST00000341037 LINC00614P0C842 121 aa9.42□□□□□ -0.9
TNC-201ENST00000341037 DUTP33316 252 aaKnown RBP9.42□□□□□ -0.9
TNC-201ENST00000341037 PRCDQ00LT1 54 aa9.42□□□□□ -0.9
TNC-201ENST00000341037 CYB5R2Q6BCY4 276 aa9.42□□□□□ -0.9
TNC-201ENST00000341037 CHCHD5Q9BSY4 110 aa9.42□□□□□ -0.9
TNC-201ENST00000341037 VSIRQ9H7M9 311 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms