RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 GNG7O60262 68 aa6.99□□□□□ -1.29
ATXN3-201ENST00000340660 BRWD1-AS2P59051 145 aa6.99□□□□□ -1.29
ATXN3-201ENST00000340660 ACSM3Q53FZ2 586 aa6.99□□□□□ -1.29
ATXN3-201ENST00000340660 MORN5Q5VZ52 161 aa6.99□□□□□ -1.29
ATXN3-201ENST00000340660 ORAI1Q96D31 301 aa6.99□□□□□ -1.29
ATXN3-201ENST00000340660 PDCD1LG2Q9BQ51 273 aa6.99□□□□□ -1.29
ATXN3-201ENST00000340660 QTRT1Q9BXR0 403 aaKnown RBP6.99□□□□□ -1.29
ATXN3-201ENST00000340660 NRN1Q9NPD7 142 aa6.99□□□□□ -1.29
ATXN3-201ENST00000340660 INSP01308 110 aa6.98□□□□□ -1.29
ATXN3-201ENST00000340660 BDKRB2P30411 391 aa6.98□□□□□ -1.29
ATXN3-201ENST00000340660 EIF2B2P49770 351 aaKnown RBP6.98□□□□□ -1.29
ATXN3-201ENST00000340660 MAPRE2Q15555 327 aa6.98□□□□□ -1.29
ATXN3-201ENST00000340660 TIMM50Q3ZCQ8 353 aa6.98□□□□□ -1.29
ATXN3-201ENST00000340660 REG3GQ6UW15 175 aa6.98□□□□□ -1.29
ATXN3-201ENST00000340660 C16orf54Q6UWD8 224 aa6.98□□□□□ -1.29
ATXN3-201ENST00000340660 KCTD9Q7L273 389 aa6.98□□□□□ -1.29
ATXN3-201ENST00000340660 RNASE8Q8TDE3 154 aaKnown RBP6.98□□□□□ -1.29
ATXN3-201ENST00000340660 RPL36ALQ969Q0 106 aaKnown RBP6.98□□□□□ -1.29
ATXN3-201ENST00000340660 TEX12Q9BXU0 123 aa6.98□□□□□ -1.29
ATXN3-201ENST00000340660 BET1LQ9NYM9 111 aa6.98□□□□□ -1.29
ATXN3-201ENST00000340660 SAC3D1A6NKF1 404 aa6.97□□□□□ -1.29
ATXN3-201ENST00000340660 M0R2Z0 102 aa6.97□□□□□ -1.29
ATXN3-201ENST00000340660 HTR2CP28335 458 aa6.97□□□□□ -1.29
ATXN3-201ENST00000340660 B2MP61769 119 aa6.97□□□□□ -1.29
ATXN3-201ENST00000340660 EFNB1P98172 346 aa6.97□□□□□ -1.29
ATXN3-201ENST00000340660 BAP18Q8IXM2 172 aa6.97□□□□□ -1.29
ATXN3-201ENST00000340660 OR4S2Q8NH73 311 aa6.97□□□□□ -1.29
ATXN3-201ENST00000340660 GIPC3Q8TF64 312 aa6.97□□□□□ -1.29
ATXN3-201ENST00000340660 BAALCQ8WXS3 180 aa6.97□□□□□ -1.29
ATXN3-201ENST00000340660 MOB3AQ96BX8 217 aa6.97□□□□□ -1.29
ATXN3-201ENST00000340660 LINC00052Q96N35 136 aa6.97□□□□□ -1.29
ATXN3-201ENST00000340660 HOPXQ9BPY8 73 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-201ENST00000340660 MRPS7Q9Y2R9 242 aaKnown RBP6.97□□□□□ -1.29
ATXN3-201ENST00000340660 KIF25-AS1Q9Y6Z4 181 aa6.97□□□□□ -1.29
ATXN3-201ENST00000340660 A0A0J9YX75 114 aa6.96□□□□□ -1.3
ATXN3-201ENST00000340660 A8MTW9 85 aa6.96□□□□□ -1.3
ATXN3-201ENST00000340660 SLC16A6O15403 523 aa6.96□□□□□ -1.3
ATXN3-201ENST00000340660 RPSAP08865 295 aaKnown RBP6.96□□□□□ -1.3
ATXN3-201ENST00000340660 HTN1P15515 57 aa6.96□□□□□ -1.3
ATXN3-201ENST00000340660 AP2S1P53680 142 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-201ENST00000340660 SPINK13Q1W4C9 94 aa6.96□□□□□ -1.3
ATXN3-201ENST00000340660 FFAR4Q5NUL3 377 aa6.96□□□□□ -1.3
ATXN3-201ENST00000340660 AWAT2Q6E213 333 aa6.96□□□□□ -1.3
ATXN3-201ENST00000340660 COMMD5Q9GZQ3 224 aa6.96□□□□□ -1.3
ATXN3-201ENST00000340660 HRASLSQ9HDD0 168 aa6.96□□□□□ -1.3
ATXN3-201ENST00000340660 NKIRAS1Q9NYS0 192 aa6.96□□□□□ -1.3
ATXN3-201ENST00000340660 WARS2Q9UGM6 360 aaKnown RBP6.96□□□□□ -1.3
ATXN3-201ENST00000340660 PRELID3BQ9Y3B1 194 aa6.96□□□□□ -1.3
ATXN3-201ENST00000340660 ZNF98A6NK75 572 aa6.95□□□□□ -1.3
ATXN3-201ENST00000340660 BET1O15155 118 aa6.95□□□□□ -1.3
ATXN3-201ENST00000340660 MT-CO2P00403 227 aa6.95□□□□□ -1.3
ATXN3-201ENST00000340660 TNFSF8P32971 234 aa6.95□□□□□ -1.3
ATXN3-201ENST00000340660 MNAT1P51948 309 aa6.95□□□□□ -1.3
ATXN3-201ENST00000340660 TAS2R43P59537 309 aa6.95□□□□□ -1.3
ATXN3-201ENST00000340660 PPP3R1P63098 170 aa6.95□□□□□ -1.3
ATXN3-201ENST00000340660 SPATA31B1PQ5VZV4 182 aa6.95□□□□□ -1.3
ATXN3-201ENST00000340660 OR2T5Q6IEZ7 315 aa6.95□□□□□ -1.3
ATXN3-201ENST00000340660 TMEM144Q7Z5S9 345 aa6.95□□□□□ -1.3
ATXN3-201ENST00000340660 OR2T29Q8NH02 315 aa6.95□□□□□ -1.3
ATXN3-201ENST00000340660 TLCD1Q96CP7 247 aa6.95□□□□□ -1.3
ATXN3-201ENST00000340660 LINC01587Q99440 93 aa6.95□□□□□ -1.3
ATXN3-201ENST00000340660 TM2D2Q9BX73 214 aa6.95□□□□□ -1.3
ATXN3-201ENST00000340660 AK3Q9UIJ7 227 aa6.95□□□□□ -1.3
ATXN3-201ENST00000340660 RBM7Q9Y580 266 aaKnown RBP6.95□□□□□ -1.3
ATXN3-201ENST00000340660 TMEM212A6NML5 194 aa6.94□□□□□ -1.3
ATXN3-201ENST00000340660 J3QLW9 94 aa6.94□□□□□ -1.3
ATXN3-201ENST00000340660 TRAPPC2P0DI81 140 aa6.94□□□□□ -1.3
ATXN3-201ENST00000340660 TRAPPC2BP0DI82 140 aa6.94□□□□□ -1.3
ATXN3-201ENST00000340660 ZNF19P17023 458 aa6.94□□□□□ -1.3
ATXN3-201ENST00000340660 SRMP19623 302 aa6.94□□□□□ -1.3
ATXN3-201ENST00000340660 CALRP27797 417 aaKnown RBP6.94□□□□□ -1.3
ATXN3-201ENST00000340660 SERPINB10P48595 397 aa6.94□□□□□ -1.3
ATXN3-201ENST00000340660 TAS2R60P59551 318 aa6.94□□□□□ -1.3
ATXN3-201ENST00000340660 NEGR1Q7Z3B1 354 aa6.94□□□□□ -1.3
ATXN3-201ENST00000340660 GID4Q8IVV7 300 aa6.94□□□□□ -1.3
ATXN3-201ENST00000340660 OR5AK2Q8NH90 309 aa6.94□□□□□ -1.3
ATXN3-201ENST00000340660 NARS2Q96I59 477 aaKnown RBP6.94□□□□□ -1.3
ATXN3-201ENST00000340660 NSMCE2Q96MF7 247 aa6.94□□□□□ -1.3
ATXN3-201ENST00000340660 WDR12Q9GZL7 423 aaKnown RBP6.94□□□□□ -1.3
ATXN3-201ENST00000340660 SAR1AQ9NR31 198 aa6.94□□□□□ -1.3
ATXN3-201ENST00000340660 TRAV12-2A0A075B6T6 113 aa6.93□□□□□ -1.3
ATXN3-201ENST00000340660 RNF222A6NCQ9 220 aa6.93□□□□□ -1.3
ATXN3-201ENST00000340660 TRDCB7Z8K6 153 aa6.93□□□□□ -1.3
ATXN3-201ENST00000340660 UPK2O00526 184 aa6.93□□□□□ -1.3
ATXN3-201ENST00000340660 NDUFAB1O14561 156 aa6.93□□□□□ -1.3
ATXN3-201ENST00000340660 PHOX2AO14813 284 aa6.93□□□□□ -1.3
ATXN3-201ENST00000340660 ZNF324O75467 553 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-201ENST00000340660 RLN2P04090 185 aa6.93□□□□□ -1.3
ATXN3-201ENST00000340660 IGKV2-30P06310 120 aa6.93□□□□□ -1.3
ATXN3-201ENST00000340660 CLDN12P56749 244 aa6.93□□□□□ -1.3
ATXN3-201ENST00000340660 THOC7Q6I9Y2 204 aaKnown RBP6.93□□□□□ -1.3
ATXN3-201ENST00000340660 ZNF493Q6ZR52 646 aa6.93□□□□□ -1.3
ATXN3-201ENST00000340660 HSD17B13Q7Z5P4 300 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-201ENST00000340660 THAP8Q8NA92 274 aa6.93□□□□□ -1.3
ATXN3-201ENST00000340660 TMEM263Q8WUH6 116 aaKnown RBP6.93□□□□□ -1.3
ATXN3-201ENST00000340660 DYDC1Q8WWB3 177 aa6.93□□□□□ -1.3
ATXN3-201ENST00000340660 C4orf36Q96KX1 117 aa6.93□□□□□ -1.3
ATXN3-201ENST00000340660 RIBC2Q9H4K1 309 aa6.93□□□□□ -1.3
ATXN3-201ENST00000340660 TRBV6-7A0A0A0MS04 114 aa6.92□□□□□ -1.3
ATXN3-201ENST00000340660 A0A0G2JND7 137 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms