RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 CCL3L1P16619 93 aa12.29□□□□□ -0.44
RRP1B-201ENST00000340648 TMEM78Q5T7P6 136 aa12.29□□□□□ -0.44
RRP1B-201ENST00000340648 LHFPL4Q7Z7J7 247 aa12.29□□□□□ -0.44
RRP1B-201ENST00000340648 C9orf106Q8NAJ2 232 aa12.29□□□□□ -0.44
RRP1B-201ENST00000340648 RNASEH2CQ8TDP1 164 aaKnown RBP12.29□□□□□ -0.44
RRP1B-201ENST00000340648 C9JCJ5 164 aa12.29□□□□□ -0.44
RRP1B-201ENST00000340648 CD69Q07108 199 aa12.29□□□□□ -0.44
RRP1B-201ENST00000340648 KLK15Q9H2R5 256 aa12.29□□□□□ -0.44
RRP1B-201ENST00000340648 SOX21Q9Y651 276 aaPredicted RBP12.29□□□□□ -0.44
RRP1B-201ENST00000340648 F2RL2O00254 374 aa12.29□□□□□ -0.44
RRP1B-201ENST00000340648 C3orf79P0CE67 100 aa12.29□□□□□ -0.44
RRP1B-201ENST00000340648 PRCDQ00LT1 54 aa12.29□□□□□ -0.44
RRP1B-201ENST00000340648 FAM90A9PA6NNJ1 464 aa12.29□□□□□ -0.44
RRP1B-201ENST00000340648 ETV2O00321 342 aaPredicted RBP12.29□□□□□ -0.44
RRP1B-201ENST00000340648 SELLP14151 372 aa12.29□□□□□ -0.44
RRP1B-201ENST00000340648 MFAP4P55083 255 aa12.29□□□□□ -0.44
RRP1B-201ENST00000340648 EPDR1Q9UM22 224 aa12.29□□□□□ -0.44
RRP1B-201ENST00000340648 MYOD1P15172 320 aa12.28□□□□□ -0.44
RRP1B-201ENST00000340648 GPR183P32249 361 aa12.28□□□□□ -0.44
RRP1B-201ENST00000340648 Q0VFX4 171 aa12.28□□□□□ -0.44
RRP1B-201ENST00000340648 LDLRAD2Q5SZI1 272 aa12.28□□□□□ -0.44
RRP1B-201ENST00000340648 FBXL15Q9H469 300 aa12.28□□□□□ -0.44
RRP1B-201ENST00000340648 IL18BPO95998 194 aa12.28□□□□□ -0.44
RRP1B-201ENST00000340648 PRB4P10163 310 aaPredicted RBP12.28□□□□□ -0.44
RRP1B-201ENST00000340648 ZFP36L1Q07352 338 aaKnown RBP12.28□□□□□ -0.44
RRP1B-201ENST00000340648 TM4SF5O14894 197 aa12.28□□□□□ -0.44
RRP1B-201ENST00000340648 CDKN1AP38936 164 aa12.28□□□□□ -0.44
RRP1B-201ENST00000340648 C1orf162Q8NEQ5 155 aaPredicted RBP12.28□□□□□ -0.44
RRP1B-201ENST00000340648 NUDT10Q8NFP7 164 aa12.28□□□□□ -0.44
RRP1B-201ENST00000340648 NUDT11Q96G61 164 aa12.28□□□□□ -0.44
RRP1B-201ENST00000340648 LINC00614P0C842 121 aa12.28□□□□□ -0.44
RRP1B-201ENST00000340648 FAM27E3Q08E93 113 aa12.28□□□□□ -0.44
RRP1B-201ENST00000340648 TIMM23BQ5SRD1 257 aa12.28□□□□□ -0.44
RRP1B-201ENST00000340648 FAM90A1Q86YD7 464 aa12.28□□□□□ -0.44
RRP1B-201ENST00000340648 TEX45Q8NA69 505 aa12.28□□□□□ -0.44
RRP1B-201ENST00000340648 SMIM12Q96EX1 92 aa12.28□□□□□ -0.44
RRP1B-201ENST00000340648 IGKV1D-33P01593 117 aa12.27□□□□□ -0.44
RRP1B-201ENST00000340648 IGKV1-33P01594 117 aa12.27□□□□□ -0.44
RRP1B-201ENST00000340648 SMIM13P0DJ93 91 aa12.27□□□□□ -0.44
RRP1B-201ENST00000340648 RPS20P60866 119 aaKnown RBP12.27□□□□□ -0.44
RRP1B-201ENST00000340648 SPRR3Q9UBC9 169 aa12.27□□□□□ -0.44
RRP1B-201ENST00000340648 PPIAL4CA0A0B4J2A2 164 aa12.27□□□□□ -0.45
RRP1B-201ENST00000340648 PPIAL4GP0DN37 164 aa12.27□□□□□ -0.45
RRP1B-201ENST00000340648 COL4A3Q01955 1670 aa12.27□□□□□ -0.45
RRP1B-201ENST00000340648 FAM181BA6NEQ2 426 aa12.27□□□□□ -0.45
RRP1B-201ENST00000340648 H3BUT2 72 aa12.27□□□□□ -0.45
RRP1B-201ENST00000340648 IGKV1-39P01597 117 aa12.27□□□□□ -0.45
RRP1B-201ENST00000340648 IGKV1D-39P04432 117 aa12.27□□□□□ -0.45
RRP1B-201ENST00000340648 PSG9Q00887 426 aa12.27□□□□□ -0.45
RRP1B-201ENST00000340648 TRAV8-6A0A0B4J262 113 aa12.27□□□□□ -0.45
RRP1B-201ENST00000340648 CCDC144NLQ6NUI1 221 aa12.27□□□□□ -0.45
RRP1B-201ENST00000340648 TSKUQ8WUA8 353 aa12.27□□□□□ -0.45
RRP1B-201ENST00000340648 COQ2Q96H96 371 aa12.27□□□□□ -0.45
RRP1B-201ENST00000340648 C9orf172C9J069 976 aa12.26□□□□□ -0.45
RRP1B-201ENST00000340648 NPIPB11E5RHQ5 1161 aa12.26□□□□□ -0.45
RRP1B-201ENST00000340648 GPX1P07203 203 aa12.26□□□□□ -0.45
RRP1B-201ENST00000340648 TMEM160Q9NX00 188 aa12.26□□□□□ -0.45
RRP1B-201ENST00000340648 CX3CL1P78423 397 aa12.26□□□□□ -0.45
RRP1B-201ENST00000340648 PRB3Q04118 309 aaPredicted RBP12.26□□□□□ -0.45
RRP1B-201ENST00000340648 CLEC7AQ9BXN2 247 aa12.26□□□□□ -0.45
RRP1B-201ENST00000340648 PRDM6Q9NQX0 595 aa12.26□□□□□ -0.45
RRP1B-201ENST00000340648 FOXI3A8MTJ6 420 aaPredicted RBP12.26□□□□□ -0.45
RRP1B-201ENST00000340648 GFRA3O60609 400 aa12.26□□□□□ -0.45
RRP1B-201ENST00000340648 PNKDQ8N490 385 aa12.26□□□□□ -0.45
RRP1B-201ENST00000340648 FOXA2Q9Y261 457 aaPredicted RBP12.26□□□□□ -0.45
RRP1B-201ENST00000340648 DIDO1Q9BTC0 2240 aaKnown RBP12.26□□□□□ -0.45
RRP1B-201ENST00000340648 TCRBV4S1A1TA0A5B7 111 aa12.26□□□□□ -0.45
RRP1B-201ENST00000340648 SS18L1O75177 396 aaPredicted RBP12.26□□□□□ -0.45
RRP1B-201ENST00000340648 DLX1P56177 255 aa12.26□□□□□ -0.45
RRP1B-201ENST00000340648 FNDC4Q9H6D8 234 aaPredicted RBP12.26□□□□□ -0.45
RRP1B-201ENST00000340648 RABAC1Q9UI14 185 aa12.26□□□□□ -0.45
RRP1B-201ENST00000340648 CDX4O14627 284 aaPredicted RBP12.25□□□□□ -0.45
RRP1B-201ENST00000340648 CD177Q8N6Q3 437 aa12.25□□□□□ -0.45
RRP1B-201ENST00000340648 SPCS1Q9Y6A9 102 aa12.25□□□□□ -0.45
RRP1B-201ENST00000340648 TRBV20OR9-2A0A075B6H5 130 aa12.25□□□□□ -0.45
RRP1B-201ENST00000340648 M0QZ24 198 aa12.25□□□□□ -0.45
RRP1B-201ENST00000340648 AREGP15514 252 aa12.25□□□□□ -0.45
RRP1B-201ENST00000340648 C10orf55Q5SWW7 151 aa12.25□□□□□ -0.45
RRP1B-201ENST00000340648 LINC00312Q9Y6C7 94 aa12.25□□□□□ -0.45
RRP1B-201ENST00000340648 KIAA1671Q9BY89 1806 aa12.25□□□□□ -0.45
RRP1B-201ENST00000340648 DOCK11Q5JSL3 2073 aa12.25□□□□□ -0.45
RRP1B-201ENST00000340648 FTH1P19P0C7X4 201 aa12.25□□□□□ -0.45
RRP1B-201ENST00000340648 M0R3E3 92 aa12.25□□□□□ -0.45
RRP1B-201ENST00000340648 IGHV3-23P01764 117 aa12.25□□□□□ -0.45
RRP1B-201ENST00000340648 OR1N2Q8NGR9 330 aa12.25□□□□□ -0.45
RRP1B-201ENST00000340648 TRAV30A0A087WSZ9 112 aa12.24□□□□□ -0.45
RRP1B-201ENST00000340648 HAPLN4Q86UW8 402 aa12.24□□□□□ -0.45
RRP1B-201ENST00000340648 C16orf92Q96LL3 132 aa12.24□□□□□ -0.45
RRP1B-201ENST00000340648 FER1L5A0AVI2 2057 aa12.24□□□□□ -0.45
RRP1B-201ENST00000340648 IGHV3OR16-13A0A075B7E8 117 aa12.24□□□□□ -0.45
RRP1B-201ENST00000340648 IGHV3-74A0A0B4J1X5 117 aa12.24□□□□□ -0.45
RRP1B-201ENST00000340648 NTN3O00634 580 aaPredicted RBP12.24□□□□□ -0.45
RRP1B-201ENST00000340648 LYPD6Q86Y78 171 aa12.24□□□□□ -0.45
RRP1B-201ENST00000340648 FAM53AQ6NSI3 398 aaPredicted RBP12.24□□□□□ -0.45
RRP1B-201ENST00000340648 SELENOKQ9Y6D0 94 aa12.24□□□□□ -0.45
RRP1B-201ENST00000340648 IGHV1-18A0A0C4DH31 117 aa12.24□□□□□ -0.45
RRP1B-201ENST00000340648 TMEM238LA0A1B0GVL6 79 aa12.24□□□□□ -0.45
RRP1B-201ENST00000340648 A6NJY4 79 aa12.24□□□□□ -0.45
RRP1B-201ENST00000340648 H7C2G1 150 aa12.24□□□□□ -0.45
RRP1B-201ENST00000340648 SAPCD1Q5SSQ6 148 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms