RNA–Protein interactions for RNA: ENST00000340356.8

SOX18-201, Transcript of SRY-box 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX18, Length 1,864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX18-201ENST00000340356 SONP18583 2426 aaKnown RBP17.03■□□□□ 0.32
SOX18-201ENST00000340356 BLCAPP62952 87 aa17.03■□□□□ 0.32
SOX18-201ENST00000340356 GUK1Q16774 197 aa17.03■□□□□ 0.32
SOX18-201ENST00000340356 C9orf152Q5JTZ5 239 aa17.03■□□□□ 0.32
SOX18-201ENST00000340356 Q6ZS46 218 aa17.03■□□□□ 0.32
SOX18-201ENST00000340356 RNASEH2CQ8TDP1 164 aaKnown RBP17.03■□□□□ 0.32
SOX18-201ENST00000340356 MRPL36Q9P0J6 103 aaKnown RBP17.03■□□□□ 0.32
SOX18-201ENST00000340356 LSM4Q9Y4Z0 139 aaKnown RBP17.03■□□□□ 0.32
SOX18-201ENST00000340356 CD5P06127 495 aa17.02■□□□□ 0.32
SOX18-201ENST00000340356 GAMTQ14353 236 aa17.02■□□□□ 0.32
SOX18-201ENST00000340356 ECSCRQ19T08 205 aa17.02■□□□□ 0.32
SOX18-201ENST00000340356 LCN15Q6UWW0 184 aa17.02■□□□□ 0.32
SOX18-201ENST00000340356 SLC16A13Q7RTY0 426 aa17.02■□□□□ 0.32
SOX18-201ENST00000340356 RPP25LQ8N5L8 163 aaKnown RBP17.02■□□□□ 0.32
SOX18-201ENST00000340356 OR5T1Q8NG75 326 aa17.02■□□□□ 0.32
SOX18-201ENST00000340356 GGTLC1Q9BX51 225 aa17.02■□□□□ 0.32
SOX18-201ENST00000340356 BTBD17A6NE02 478 aa17.01■□□□□ 0.31
SOX18-201ENST00000340356 FNDC10F2Z333 226 aa17.01■□□□□ 0.31
SOX18-201ENST00000340356 HOXA3O43365 443 aaPredicted RBP17.01■□□□□ 0.31
SOX18-201ENST00000340356 EIF3GO75821 320 aaKnown RBP eCLIP17.01■□□□□ 0.31
SOX18-201ENST00000340356 HBE1P02100 147 aa17.01■□□□□ 0.31
SOX18-201ENST00000340356 MBP02144 154 aa17.01■□□□□ 0.31
SOX18-201ENST00000340356 DEFA4P12838 97 aa17.01■□□□□ 0.31
SOX18-201ENST00000340356 SRP14P37108 136 aaKnown RBP17.01■□□□□ 0.31
SOX18-201ENST00000340356 TEPPQ6URK8 271 aa17.01■□□□□ 0.31
SOX18-201ENST00000340356 OR10G4Q8NGN3 311 aa17.01■□□□□ 0.31
SOX18-201ENST00000340356 OR10G9Q8NGN4 311 aa17.01■□□□□ 0.31
SOX18-201ENST00000340356 OR10G7Q8NGN6 311 aa17.01■□□□□ 0.31
SOX18-201ENST00000340356 SGMS2Q8NHU3 365 aa17.01■□□□□ 0.31
SOX18-201ENST00000340356 SCRT1Q9BWW7 348 aa17.01■□□□□ 0.31
SOX18-201ENST00000340356 EIF5A2Q9GZV4 153 aaKnown RBP17.01■□□□□ 0.31
SOX18-201ENST00000340356 ANK3Q12955 4377 aaKnown RBP17.01■□□□□ 0.31
SOX18-201ENST00000340356 C9JQL5 133 aa17.01■□□□□ 0.31
SOX18-201ENST00000340356 G3V318 75 aa17.01■□□□□ 0.31
SOX18-201ENST00000340356 APOC3P02656 99 aa17.01■□□□□ 0.31
SOX18-201ENST00000340356 CRYGCP07315 174 aa17.01■□□□□ 0.31
SOX18-201ENST00000340356 SIGLECL1Q8N7X8 197 aa17.01■□□□□ 0.31
SOX18-201ENST00000340356 PRDM13Q9H4Q3 707 aa17.01■□□□□ 0.31
SOX18-201ENST00000340356 LINC00527Q9UJ94 153 aa17.01■□□□□ 0.31
SOX18-201ENST00000340356 IGKV1OR2-108A0A075B7D4 117 aa17■□□□□ 0.31
SOX18-201ENST00000340356 NPIPB5A8MRT5 1133 aa17■□□□□ 0.31
SOX18-201ENST00000340356 ADCYAP1P18509 176 aa17■□□□□ 0.31
SOX18-201ENST00000340356 FGF8P55075 233 aaPredicted RBP17■□□□□ 0.31
SOX18-201ENST00000340356 TTC9CQ8N5M4 171 aa17■□□□□ 0.31
SOX18-201ENST00000340356 MBD3L1Q8WWY6 194 aa17■□□□□ 0.31
SOX18-201ENST00000340356 ACY3Q96HD9 319 aa17■□□□□ 0.31
SOX18-201ENST00000340356 PBDC1Q9BVG4 233 aa17■□□□□ 0.31
SOX18-201ENST00000340356 TRAV1-1A0A0B4J248 108 aa16.99■□□□□ 0.31
SOX18-201ENST00000340356 M6PRP20645 277 aa16.99■□□□□ 0.31
SOX18-201ENST00000340356 GPX4P36969 197 aaPredicted RBP16.99■□□□□ 0.31
SOX18-201ENST00000340356 MIC13Q5XKP0 118 aa16.99■□□□□ 0.31
SOX18-201ENST00000340356 UNQ5815/PRO19632Q6UWF5 114 aa16.99■□□□□ 0.31
SOX18-201ENST00000340356 OR5R1Q8NH85 324 aa16.99■□□□□ 0.31
SOX18-201ENST00000340356 TMUB1Q9BVT8 246 aa16.99■□□□□ 0.31
SOX18-201ENST00000340356 SLC25A22Q9H936 323 aa16.99■□□□□ 0.31
SOX18-201ENST00000340356 PXMP4Q9Y6I8 212 aa16.99■□□□□ 0.31
SOX18-201ENST00000340356 FLNBO75369 2602 aaKnown RBP16.99■□□□□ 0.31
SOX18-201ENST00000340356 MAP1LC3B2A6NCE7 125 aa16.99■□□□□ 0.31
SOX18-201ENST00000340356 MT-CO2P00403 227 aa16.99■□□□□ 0.31
SOX18-201ENST00000340356 DEFA5Q01523 94 aa16.99■□□□□ 0.31
SOX18-201ENST00000340356 PEA15Q15121 130 aa16.99■□□□□ 0.31
SOX18-201ENST00000340356 ACOT6Q3I5F7 207 aaPredicted RBP16.99■□□□□ 0.31
SOX18-201ENST00000340356 FAM122CQ6P4D5 195 aa16.99■□□□□ 0.31
SOX18-201ENST00000340356 C16orf82Q7Z2V1 217 aa16.99■□□□□ 0.31
SOX18-201ENST00000340356 CACNG8Q8WXS5 425 aa16.99■□□□□ 0.31
SOX18-201ENST00000340356 FANCD2OSQ96PS1 177 aa16.99■□□□□ 0.31
SOX18-201ENST00000340356 DUX5Q96PT3 197 aa16.99■□□□□ 0.31
SOX18-201ENST00000340356 MAP1LC3BQ9GZQ8 125 aa16.99■□□□□ 0.31
SOX18-201ENST00000340356 VPREB3Q9UKI3 123 aa16.99■□□□□ 0.31
SOX18-201ENST00000340356 F8W036 122 aa16.98■□□□□ 0.31
SOX18-201ENST00000340356 SCO1O75880 301 aa16.98■□□□□ 0.31
SOX18-201ENST00000340356 SFTA3P0C7M3 94 aa16.98■□□□□ 0.31
SOX18-201ENST00000340356 RAB31Q13636 194 aa16.98■□□□□ 0.31
SOX18-201ENST00000340356 GCSAMLQ5JQS6 135 aa16.98■□□□□ 0.31
SOX18-201ENST00000340356 TMEM144Q7Z5S9 345 aa16.98■□□□□ 0.31
SOX18-201ENST00000340356 TEX29Q8N6K0 151 aa16.98■□□□□ 0.31
SOX18-201ENST00000340356 SLC35E1Q96K37 410 aa16.98■□□□□ 0.31
SOX18-201ENST00000340356 SLC39A9Q9NUM3 307 aa16.98■□□□□ 0.31
SOX18-201ENST00000340356 M0QZK8 103 aa16.97■□□□□ 0.31
SOX18-201ENST00000340356 HMGB3O15347 200 aaKnown RBP16.97■□□□□ 0.31
SOX18-201ENST00000340356 LY6G6DO95868 133 aa16.97■□□□□ 0.31
SOX18-201ENST00000340356 HAGHQ16775 308 aa16.97■□□□□ 0.31
SOX18-201ENST00000340356 NPIPB3Q92617 1050 aa16.97■□□□□ 0.31
SOX18-201ENST00000340356 RARRES2Q99969 163 aa16.97■□□□□ 0.31
SOX18-201ENST00000340356 CTXND1A0A1B0GTU2 59 aa16.97■□□□□ 0.31
SOX18-201ENST00000340356 RBFOX3A6NFN3 312 aa16.97■□□□□ 0.31
SOX18-201ENST00000340356 I3L2K1 104 aa16.97■□□□□ 0.31
SOX18-201ENST00000340356 SOX15O60248 233 aa16.97■□□□□ 0.31
SOX18-201ENST00000340356 YIF1AO95070 293 aa16.97■□□□□ 0.31
SOX18-201ENST00000340356 PPT1P50897 306 aa16.97■□□□□ 0.31
SOX18-201ENST00000340356 ACTR3CQ9C0K3 210 aaPredicted RBP16.97■□□□□ 0.31
SOX18-201ENST00000340356 KCNIP2Q9NS61 270 aa16.97■□□□□ 0.31
SOX18-201ENST00000340356 IGLV11-55A0A075B6I3 123 aa16.96■□□□□ 0.31
SOX18-201ENST00000340356 IGHG2P01859 326 aa16.96■□□□□ 0.31
SOX18-201ENST00000340356 RND2P52198 227 aa16.96■□□□□ 0.31
SOX18-201ENST00000340356 B2MP61769 119 aa16.96■□□□□ 0.31
SOX18-201ENST00000340356 NOL4LQ96MY1 436 aaPredicted RBP16.96■□□□□ 0.31
SOX18-201ENST00000340356 S4R3C0 116 aa16.96■□□□□ 0.31
SOX18-201ENST00000340356 K7EIM0 57 aa16.95■□□□□ 0.3
SOX18-201ENST00000340356 CORTO00230 105 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms