RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 TRIM16LQ309B1 348 aa14.36□□□□□ -0.11
ITGA4-202ENST00000339307 CEMP1Q6PRD7 247 aaPredicted RBP14.36□□□□□ -0.11
ITGA4-202ENST00000339307 TCF24Q7RTU0 167 aa14.36□□□□□ -0.11
ITGA4-202ENST00000339307 ZNF114Q8NC26 417 aa14.36□□□□□ -0.11
ITGA4-202ENST00000339307 RNASE11Q8TAA1 199 aaKnown RBP14.36□□□□□ -0.11
ITGA4-202ENST00000339307 OR10C1Q96KK4 312 aa14.36□□□□□ -0.11
ITGA4-202ENST00000339307 SRRQ9GZT4 340 aa14.36□□□□□ -0.11
ITGA4-202ENST00000339307 ST8SIA3O43173 380 aa14.35□□□□□ -0.11
ITGA4-202ENST00000339307 ATG12O94817 140 aa14.35□□□□□ -0.11
ITGA4-202ENST00000339307 RAB3DO95716 219 aa14.35□□□□□ -0.11
ITGA4-202ENST00000339307 AKAIN1P0CW23 69 aa14.35□□□□□ -0.11
ITGA4-202ENST00000339307 NPBWR1P48145 328 aa14.35□□□□□ -0.11
ITGA4-202ENST00000339307 TP53RKQ96S44 253 aa14.35□□□□□ -0.11
ITGA4-202ENST00000339307 CSTL1Q9H114 145 aa14.35□□□□□ -0.11
ITGA4-202ENST00000339307 ENY2Q9NPA8 101 aa14.35□□□□□ -0.11
ITGA4-202ENST00000339307 COPZ2Q9P299 210 aa14.35□□□□□ -0.11
ITGA4-202ENST00000339307 KLK5Q9Y337 293 aaPredicted RBP14.35□□□□□ -0.11
ITGA4-202ENST00000339307 C3orf85A0A1B0GTC6 90 aa14.34□□□□□ -0.11
ITGA4-202ENST00000339307 MPTX1A8MV57 137 aa14.34□□□□□ -0.11
ITGA4-202ENST00000339307 FAUP35544 74 aaKnown RBP14.34□□□□□ -0.11
ITGA4-202ENST00000339307 HOXA1P49639 335 aaPredicted RBP14.34□□□□□ -0.11
ITGA4-202ENST00000339307 SP6Q3SY56 376 aa14.34□□□□□ -0.11
ITGA4-202ENST00000339307 SCGB2B2Q4G0G5 96 aa14.34□□□□□ -0.11
ITGA4-202ENST00000339307 TOMM20LQ6UXN7 152 aa14.34□□□□□ -0.11
ITGA4-202ENST00000339307 TRIM63Q969Q1 353 aa14.34□□□□□ -0.11
ITGA4-202ENST00000339307 ZNF486Q96H40 463 aaPredicted RBP14.34□□□□□ -0.11
ITGA4-202ENST00000339307 ZNF414Q96IQ9 312 aa14.34□□□□□ -0.11
ITGA4-202ENST00000339307 IGKV1-5P01602 117 aa14.33□□□□□ -0.11
ITGA4-202ENST00000339307 SUB1P53999 127 aaKnown RBP eCLIP14.33□□□□□ -0.11
ITGA4-202ENST00000339307 RND3P61587 244 aa14.33□□□□□ -0.11
ITGA4-202ENST00000339307 ST8SIA2Q92186 375 aa14.33□□□□□ -0.11
ITGA4-202ENST00000339307 PUS1Q9Y606 427 aaKnown RBP eCLIP14.33□□□□□ -0.11
ITGA4-202ENST00000339307 BIRC6Q9NR09 4857 aa14.33□□□□□ -0.12
ITGA4-202ENST00000339307 A0A0B4J293 547 aa14.32□□□□□ -0.12
ITGA4-202ENST00000339307 DISC1C4P0D8 188 aa14.32□□□□□ -0.12
ITGA4-202ENST00000339307 LHFPL1Q86WI0 220 aa14.32□□□□□ -0.12
ITGA4-202ENST00000339307 TOMM5Q8N4H5 51 aa14.32□□□□□ -0.12
ITGA4-202ENST00000339307 CCDC71LQ8N9Z2 235 aa14.32□□□□□ -0.12
ITGA4-202ENST00000339307 ZFAND1Q8TCF1 268 aa14.32□□□□□ -0.12
ITGA4-202ENST00000339307 RRNAD1Q96FB5 475 aaKnown RBP14.32□□□□□ -0.12
ITGA4-202ENST00000339307 RARRES2Q99969 163 aa14.32□□□□□ -0.12
ITGA4-202ENST00000339307 DFFBO76075 338 aa14.32□□□□□ -0.12
ITGA4-202ENST00000339307 APOHP02749 345 aaPredicted RBP14.32□□□□□ -0.12
ITGA4-202ENST00000339307 FAM90A2PQ658T7 463 aa14.32□□□□□ -0.12
ITGA4-202ENST00000339307 LEMD1Q68G75 181 aa14.32□□□□□ -0.12
ITGA4-202ENST00000339307 ZNF600Q6ZNG1 722 aa14.32□□□□□ -0.12
ITGA4-202ENST00000339307 TERB2Q8NHR7 220 aa14.32□□□□□ -0.12
ITGA4-202ENST00000339307 PRRT1Q99946 306 aa14.32□□□□□ -0.12
ITGA4-202ENST00000339307 CCDC32Q9BV29 185 aa14.32□□□□□ -0.12
ITGA4-202ENST00000339307 RABAC1Q9UI14 185 aa14.32□□□□□ -0.12
ITGA4-202ENST00000339307 TMEM50AO95807 157 aa14.31□□□□□ -0.12
ITGA4-202ENST00000339307 CD5P06127 495 aa14.31□□□□□ -0.12
ITGA4-202ENST00000339307 OPRK1P41145 380 aa14.31□□□□□ -0.12
ITGA4-202ENST00000339307 KLF9Q13886 244 aaPredicted RBP14.31□□□□□ -0.12
ITGA4-202ENST00000339307 TRIQKQ629K1 86 aa14.31□□□□□ -0.12
ITGA4-202ENST00000339307 OR4D10Q8NGI6 311 aa14.31□□□□□ -0.12
ITGA4-202ENST00000339307 WDR12Q9GZL7 423 aaKnown RBP14.31□□□□□ -0.12
ITGA4-202ENST00000339307 MS4A6AQ9H2W1 248 aa14.31□□□□□ -0.12
ITGA4-202ENST00000339307 SCP2D1Q9UJQ7 156 aa14.31□□□□□ -0.12
ITGA4-202ENST00000339307 CORTO00230 105 aa14.3□□□□□ -0.12
ITGA4-202ENST00000339307 CA1P00915 261 aaPredicted RBP14.3□□□□□ -0.12
ITGA4-202ENST00000339307 INPP1P49441 399 aa14.3□□□□□ -0.12
ITGA4-202ENST00000339307 DEFB131AP59861 70 aa14.3□□□□□ -0.12
ITGA4-202ENST00000339307 LILRB2Q8N423 598 aa14.3□□□□□ -0.12
ITGA4-202ENST00000339307 OR4C16Q8NGL9 310 aa14.3□□□□□ -0.12
ITGA4-202ENST00000339307 OR13C8Q8NGS7 320 aa14.3□□□□□ -0.12
ITGA4-202ENST00000339307 OR11H2Q8NH07 326 aa14.3□□□□□ -0.12
ITGA4-202ENST00000339307 MARCH1Q8TCQ1 289 aa14.3□□□□□ -0.12
ITGA4-202ENST00000339307 PHLDA1Q8WV24 401 aaPredicted RBP14.3□□□□□ -0.12
ITGA4-202ENST00000339307 TMEM230Q96A57 120 aa14.3□□□□□ -0.12
ITGA4-202ENST00000339307 SDHCQ99643 169 aaPredicted RBP14.3□□□□□ -0.12
ITGA4-202ENST00000339307 TMEM231Q9H6L2 316 aa14.3□□□□□ -0.12
ITGA4-202ENST00000339307 FBXL17Q9UF56 701 aa14.3□□□□□ -0.12
ITGA4-202ENST00000339307 PLECQ15149 4684 aaKnown RBP14.29□□□□□ -0.12
ITGA4-202ENST00000339307 SCGB2A1O75556 95 aa14.29□□□□□ -0.12
ITGA4-202ENST00000339307 RNASE2P10153 161 aaKnown RBP14.29□□□□□ -0.12
ITGA4-202ENST00000339307 NPPCP23582 126 aa14.29□□□□□ -0.12
ITGA4-202ENST00000339307 SURF2Q15527 256 aaPredicted RBP14.29□□□□□ -0.12
ITGA4-202ENST00000339307 MLANAQ16655 118 aa14.29□□□□□ -0.12
ITGA4-202ENST00000339307 GATAD1Q8WUU5 269 aa14.29□□□□□ -0.12
ITGA4-202ENST00000339307 A0A1B0GU03 582 aa14.28□□□□□ -0.12
ITGA4-202ENST00000339307 ATF4P18848 351 aaPredicted RBP14.28□□□□□ -0.12
ITGA4-202ENST00000339307 ZNF846Q147U1 533 aa14.28□□□□□ -0.12
ITGA4-202ENST00000339307 BAK1Q16611 211 aa14.28□□□□□ -0.12
ITGA4-202ENST00000339307 SCGB3A2Q96PL1 93 aa14.28□□□□□ -0.12
ITGA4-202ENST00000339307 C7orf50Q9BRJ6 194 aaKnown RBP14.28□□□□□ -0.12
ITGA4-202ENST00000339307 VSIRQ9H7M9 311 aa14.28□□□□□ -0.12
ITGA4-202ENST00000339307 ZFAND3Q9H8U3 227 aa14.28□□□□□ -0.12
ITGA4-202ENST00000339307 C14orf166Q9Y224 244 aaKnown RBP14.28□□□□□ -0.12
ITGA4-202ENST00000339307 TEX13DA0A0J9YY54 714 aaPredicted RBP14.27□□□□□ -0.12
ITGA4-202ENST00000339307 A0A1W2PS18 150 aa14.27□□□□□ -0.12
ITGA4-202ENST00000339307 NAP1L6A6NFF2 107 aa14.27□□□□□ -0.12
ITGA4-202ENST00000339307 DEFB4AO15263 64 aa14.27□□□□□ -0.12
ITGA4-202ENST00000339307 P0C879 139 aa14.27□□□□□ -0.12
ITGA4-202ENST00000339307 FAAP20Q6NZ36 180 aa14.27□□□□□ -0.12
ITGA4-202ENST00000339307 STXBP6Q8NFX7 210 aa14.27□□□□□ -0.12
ITGA4-202ENST00000339307 C11orf45Q8TAV5 145 aa14.27□□□□□ -0.12
ITGA4-202ENST00000339307 NARS2Q96I59 477 aaKnown RBP14.27□□□□□ -0.12
ITGA4-202ENST00000339307 METTL26Q96S19 204 aa14.27□□□□□ -0.12
ITGA4-202ENST00000339307 A0A0G2JRQ6 117 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms