RNA–Protein interactions for RNA: ENST00000339113.8

ATAD3A-201, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 2

Gene ATAD3A, Length 2,330 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-201ENST00000339113 OR2T10Q8NGZ9 312 aa13.78□□□□□ -0.2
ATAD3A-201ENST00000339113 RPUSD4Q96CM3 377 aaKnown RBP13.78□□□□□ -0.2
ATAD3A-201ENST00000339113 BTF3L4Q96K17 158 aa13.78□□□□□ -0.2
ATAD3A-201ENST00000339113 LMO4P61968 165 aa13.77□□□□□ -0.21
ATAD3A-201ENST00000339113 SRSF1Q07955 248 aaKnown RBP eCLIP13.77□□□□□ -0.21
ATAD3A-201ENST00000339113 ARSJQ5FYB0 599 aaPredicted RBP13.77□□□□□ -0.21
ATAD3A-201ENST00000339113 LHFPL4Q7Z7J7 247 aa13.77□□□□□ -0.21
ATAD3A-201ENST00000339113 A0A1W2PPI3 338 aa13.76□□□□□ -0.21
ATAD3A-201ENST00000339113 CD99P14209 185 aa13.76□□□□□ -0.21
ATAD3A-201ENST00000339113 PAX2Q02962 417 aa13.76□□□□□ -0.21
ATAD3A-201ENST00000339113 OR1L8Q8NGR8 309 aa13.76□□□□□ -0.21
ATAD3A-201ENST00000339113 VSTM2AQ8TAG5 236 aa13.76□□□□□ -0.21
ATAD3A-201ENST00000339113 AMMECR1Q9Y4X0 333 aaPredicted RBP13.76□□□□□ -0.21
ATAD3A-201ENST00000339113 LGALS7P47929 136 aa13.76□□□□□ -0.21
ATAD3A-201ENST00000339113 TMEM249Q2WGJ8 235 aa13.76□□□□□ -0.21
ATAD3A-201ENST00000339113 OR10G9Q8NGN4 311 aa13.76□□□□□ -0.21
ATAD3A-201ENST00000339113 OR10G7Q8NGN6 311 aa13.76□□□□□ -0.21
ATAD3A-201ENST00000339113 OR4A5Q8NH83 315 aa13.76□□□□□ -0.21
ATAD3A-201ENST00000339113 HILPDAQ9Y5L2 63 aa13.76□□□□□ -0.21
ATAD3A-201ENST00000339113 DEFA4P12838 97 aa13.75□□□□□ -0.21
ATAD3A-201ENST00000339113 HTR1DP28221 377 aa13.75□□□□□ -0.21
ATAD3A-201ENST00000339113 VMA21Q3ZAQ7 101 aa13.75□□□□□ -0.21
ATAD3A-201ENST00000339113 FFAR4Q5NUL3 377 aa13.75□□□□□ -0.21
ATAD3A-201ENST00000339113 TPTE2P1Q5T6R2 138 aa13.75□□□□□ -0.21
ATAD3A-201ENST00000339113 KCNIP4Q6PIL6 250 aa13.75□□□□□ -0.21
ATAD3A-201ENST00000339113 VMO1Q7Z5L0 202 aa13.75□□□□□ -0.21
ATAD3A-201ENST00000339113 NECAP1Q8NC96 275 aa13.75□□□□□ -0.21
ATAD3A-201ENST00000339113 IMMP2LQ96T52 175 aa13.75□□□□□ -0.21
ATAD3A-201ENST00000339113 CRYBG3Q68DQ2 2970 aa13.75□□□□□ -0.21
ATAD3A-201ENST00000339113 A0A1W2PPQ1 181 aa13.75□□□□□ -0.21
ATAD3A-201ENST00000339113 ODF3BA8MYP8 253 aa13.75□□□□□ -0.21
ATAD3A-201ENST00000339113 CRYGBP07316 175 aa13.75□□□□□ -0.21
ATAD3A-201ENST00000339113 RNASE2P10153 161 aaKnown RBP13.75□□□□□ -0.21
ATAD3A-201ENST00000339113 WT1-ASQ06250 92 aa13.75□□□□□ -0.21
ATAD3A-201ENST00000339113 ZNF124Q15973 351 aa13.75□□□□□ -0.21
ATAD3A-201ENST00000339113 MLANAQ16655 118 aa13.75□□□□□ -0.21
ATAD3A-201ENST00000339113 IQCJQ1A5X6 159 aa13.75□□□□□ -0.21
ATAD3A-201ENST00000339113 OR4F5Q8NH21 305 aa13.75□□□□□ -0.21
ATAD3A-201ENST00000339113 OR4F4Q96R69 305 aa13.75□□□□□ -0.21
ATAD3A-201ENST00000339113 NEU1Q99519 415 aa13.75□□□□□ -0.21
ATAD3A-201ENST00000339113 MGST2Q99735 147 aa13.75□□□□□ -0.21
ATAD3A-201ENST00000339113 ELOVL1Q9BW60 279 aa13.75□□□□□ -0.21
ATAD3A-201ENST00000339113 DPM3Q9P2X0 92 aa13.75□□□□□ -0.21
ATAD3A-201ENST00000339113 TIMM23O14925 209 aa13.74□□□□□ -0.21
ATAD3A-201ENST00000339113 HMGB3O15347 200 aaKnown RBP13.74□□□□□ -0.21
ATAD3A-201ENST00000339113 PSG5Q15238 335 aa13.74□□□□□ -0.21
ATAD3A-201ENST00000339113 ZNF709Q8N972 641 aa13.74□□□□□ -0.21
ATAD3A-201ENST00000339113 CCL19Q99731 98 aa13.74□□□□□ -0.21
ATAD3A-201ENST00000339113 SPOCK3Q9BQ16 436 aa13.74□□□□□ -0.21
ATAD3A-201ENST00000339113 SLC25A22Q9H936 323 aa13.74□□□□□ -0.21
ATAD3A-201ENST00000339113 PLXNB1O43157 2135 aa13.74□□□□□ -0.21
ATAD3A-201ENST00000339113 GCSAMLQ5JQS6 135 aa13.74□□□□□ -0.21
ATAD3A-201ENST00000339113 C1orf122Q6ZSJ8 110 aa13.74□□□□□ -0.21
ATAD3A-201ENST00000339113 FUT9Q9Y231 359 aa13.74□□□□□ -0.21
ATAD3A-201ENST00000339113 LSM4Q9Y4Z0 139 aaKnown RBP13.74□□□□□ -0.21
ATAD3A-201ENST00000339113 C2orf83Q53S99 150 aa13.73□□□□□ -0.21
ATAD3A-201ENST00000339113 TEX45Q8NA69 505 aa13.73□□□□□ -0.21
ATAD3A-201ENST00000339113 TMEM37Q8WXS4 190 aa13.73□□□□□ -0.21
ATAD3A-201ENST00000339113 SIRPDQ9H106 197 aa13.73□□□□□ -0.21
ATAD3A-201ENST00000339113 NPVFQ9HCQ7 196 aa13.73□□□□□ -0.21
ATAD3A-201ENST00000339113 UBR5O95071 2799 aaPredicted RBP13.73□□□□□ -0.21
ATAD3A-201ENST00000339113 ZNF705GA8MUZ8 300 aaPredicted RBP13.73□□□□□ -0.21
ATAD3A-201ENST00000339113 SOX15O60248 233 aa13.73□□□□□ -0.21
ATAD3A-201ENST00000339113 CD24P25063 80 aa13.73□□□□□ -0.21
ATAD3A-201ENST00000339113 CNN1P51911 297 aaKnown RBP13.73□□□□□ -0.21
ATAD3A-201ENST00000339113 NUTF2P61970 127 aaKnown RBP13.73□□□□□ -0.21
ATAD3A-201ENST00000339113 FBLN7Q53RD9 439 aa13.73□□□□□ -0.21
ATAD3A-201ENST00000339113 GBGT1Q8N5D6 347 aa13.73□□□□□ -0.21
ATAD3A-201ENST00000339113 SIGLEC9Q9Y336 463 aa13.73□□□□□ -0.21
ATAD3A-201ENST00000339113 C17orf112F2Z3M2 114 aa13.72□□□□□ -0.21
ATAD3A-201ENST00000339113 PDE6DO43924 150 aa13.72□□□□□ -0.21
ATAD3A-201ENST00000339113 GOSR1O95249 250 aa13.72□□□□□ -0.21
ATAD3A-201ENST00000339113 HOXB4P17483 251 aaPredicted RBP13.72□□□□□ -0.21
ATAD3A-201ENST00000339113 PRSS8Q16651 343 aa13.72□□□□□ -0.21
ATAD3A-201ENST00000339113 DYNAPQ8N1N2 210 aa13.72□□□□□ -0.21
ATAD3A-201ENST00000339113 KIR3DL3Q8N743 410 aa13.72□□□□□ -0.21
ATAD3A-201ENST00000339113 CFHR4Q92496 578 aa13.72□□□□□ -0.21
ATAD3A-201ENST00000339113 GGTLC1Q9BX51 225 aa13.72□□□□□ -0.21
ATAD3A-201ENST00000339113 SPG11Q96JI7 2443 aa13.72□□□□□ -0.21
ATAD3A-201ENST00000339113 IGHV2-70DA0A0C4DH43 119 aa13.72□□□□□ -0.21
ATAD3A-201ENST00000339113 RPL15P61313 204 aaKnown RBP13.72□□□□□ -0.21
ATAD3A-201ENST00000339113 FOXL1Q12952 345 aa13.72□□□□□ -0.21
ATAD3A-201ENST00000339113 USF2Q15853 346 aaPredicted RBP13.72□□□□□ -0.21
ATAD3A-201ENST00000339113 MIC13Q5XKP0 118 aa13.72□□□□□ -0.21
ATAD3A-201ENST00000339113 NRGNQ92686 78 aa13.72□□□□□ -0.21
ATAD3A-201ENST00000339113 FBXL15Q9H469 300 aa13.72□□□□□ -0.21
ATAD3A-201ENST00000339113 WNK2Q9Y3S1 2297 aa13.71□□□□□ -0.21
ATAD3A-201ENST00000339113 INS-IGF2F8WCM5 200 aa13.71□□□□□ -0.21
ATAD3A-201ENST00000339113 FCN1O00602 326 aa13.71□□□□□ -0.21
ATAD3A-201ENST00000339113 PAGE4O60829 102 aa13.71□□□□□ -0.21
ATAD3A-201ENST00000339113 REG1AP05451 166 aa13.71□□□□□ -0.21
ATAD3A-201ENST00000339113 ERHP84090 104 aaKnown RBP13.71□□□□□ -0.21
ATAD3A-201ENST00000339113 TMEM144Q7Z5S9 345 aa13.71□□□□□ -0.21
ATAD3A-201ENST00000339113 SSMEM1Q8WWF3 244 aa13.71□□□□□ -0.21
ATAD3A-201ENST00000339113 MPDU1O75352 247 aa13.7□□□□□ -0.22
ATAD3A-201ENST00000339113 TNXAQ16473 311 aa13.7□□□□□ -0.22
ATAD3A-201ENST00000339113 LINC01551Q86U37 167 aa13.7□□□□□ -0.22
ATAD3A-201ENST00000339113 MRPL41Q8IXM3 137 aaKnown RBP13.7□□□□□ -0.22
ATAD3A-201ENST00000339113 GATAD1Q8WUU5 269 aa13.7□□□□□ -0.22
ATAD3A-201ENST00000339113 LPAR2Q9HBW0 351 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms