RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 ABCA2Q9BZC7 2435 aa12.98□□□□□ -0.33
SCNN1A-202ENST00000338748 ZNF462Q96JM2 2506 aa12.97□□□□□ -0.33
SCNN1A-202ENST00000338748 PSMB11A5LHX3 300 aa12.97□□□□□ -0.33
SCNN1A-202ENST00000338748 B4DEV8 164 aa12.97□□□□□ -0.33
SCNN1A-202ENST00000338748 NDUFB4O95168 129 aa12.97□□□□□ -0.33
SCNN1A-202ENST00000338748 MISP3Q96FF7 219 aa12.97□□□□□ -0.33
SCNN1A-202ENST00000338748 SCO2A0A1W2PP80 73 aa12.97□□□□□ -0.33
SCNN1A-202ENST00000338748 RND2P52198 227 aa12.97□□□□□ -0.33
SCNN1A-202ENST00000338748 PAX2Q02962 417 aa12.97□□□□□ -0.33
SCNN1A-202ENST00000338748 MMDQ15546 238 aa12.97□□□□□ -0.33
SCNN1A-202ENST00000338748 AURKAIP1Q9NWT8 199 aaPredicted RBP12.97□□□□□ -0.33
SCNN1A-202ENST00000338748 KLF2Q9Y5W3 355 aaPredicted RBP12.97□□□□□ -0.33
SCNN1A-202ENST00000338748 TRBV20OR9-2A0A075B6H5 130 aa12.96□□□□□ -0.33
SCNN1A-202ENST00000338748 PGPEP1LA6NFU8 196 aa12.96□□□□□ -0.33
SCNN1A-202ENST00000338748 HOXB4P17483 251 aaPredicted RBP12.96□□□□□ -0.33
SCNN1A-202ENST00000338748 SUB1P53999 127 aaKnown RBP eCLIP12.96□□□□□ -0.33
SCNN1A-202ENST00000338748 SSX2Q16385 188 aa12.96□□□□□ -0.33
SCNN1A-202ENST00000338748 PVRIGQ6DKI7 326 aa12.96□□□□□ -0.33
SCNN1A-202ENST00000338748 SRSF12Q8WXF0 261 aaKnown RBP12.96□□□□□ -0.33
SCNN1A-202ENST00000338748 DOK5Q9P104 306 aa12.96□□□□□ -0.33
SCNN1A-202ENST00000338748 PDE6DO43924 150 aa12.96□□□□□ -0.34
SCNN1A-202ENST00000338748 OR5G3P0C626 314 aa12.96□□□□□ -0.34
SCNN1A-202ENST00000338748 ZNF114Q8NC26 417 aa12.96□□□□□ -0.34
SCNN1A-202ENST00000338748 SLC25A33Q9BSK2 321 aa12.96□□□□□ -0.34
SCNN1A-202ENST00000338748 TRAV5A0A0B4J249 113 aa12.95□□□□□ -0.34
SCNN1A-202ENST00000338748 CXorf65A6NEN9 183 aa12.95□□□□□ -0.34
SCNN1A-202ENST00000338748 C1orf196B1AJZ1 125 aa12.95□□□□□ -0.34
SCNN1A-202ENST00000338748 OVOL3O00110 214 aa12.95□□□□□ -0.34
SCNN1A-202ENST00000338748 MOSP00540 346 aa12.95□□□□□ -0.34
SCNN1A-202ENST00000338748 PLGLAQ15195 96 aa12.95□□□□□ -0.34
SCNN1A-202ENST00000338748 MALSU1Q96EH3 234 aa12.95□□□□□ -0.34
SCNN1A-202ENST00000338748 EPG5Q9HCE0 2579 aa12.95□□□□□ -0.34
SCNN1A-202ENST00000338748 NDUFS6O75380 124 aaKnown RBP12.94□□□□□ -0.34
SCNN1A-202ENST00000338748 RAB5BP61020 215 aa12.94□□□□□ -0.34
SCNN1A-202ENST00000338748 C16orf82Q7Z2V1 217 aa12.94□□□□□ -0.34
SCNN1A-202ENST00000338748 THAP8Q8NA92 274 aa12.94□□□□□ -0.34
SCNN1A-202ENST00000338748 OR5T1Q8NG75 326 aa12.94□□□□□ -0.34
SCNN1A-202ENST00000338748 UHRF2Q96PU4 802 aa12.94□□□□□ -0.34
SCNN1A-202ENST00000338748 TCRBV4S1A1TA0A5B7 111 aa12.94□□□□□ -0.34
SCNN1A-202ENST00000338748 IGHV4-39P01824 125 aa12.94□□□□□ -0.34
SCNN1A-202ENST00000338748 CRYGCP07315 174 aa12.94□□□□□ -0.34
SCNN1A-202ENST00000338748 OR10J4P0C629 311 aa12.94□□□□□ -0.34
SCNN1A-202ENST00000338748 LMO4P61968 165 aa12.94□□□□□ -0.34
SCNN1A-202ENST00000338748 EAF1Q96JC9 268 aaPredicted RBP12.94□□□□□ -0.34
SCNN1A-202ENST00000338748 SIRPDQ9H106 197 aa12.94□□□□□ -0.34
SCNN1A-202ENST00000338748 TMEM242Q9NWH2 141 aa12.94□□□□□ -0.34
SCNN1A-202ENST00000338748 CLDN34H7C241 214 aa12.93□□□□□ -0.34
SCNN1A-202ENST00000338748 OR7C2O60412 319 aa12.93□□□□□ -0.34
SCNN1A-202ENST00000338748 PRB1P04280 392 aa12.93□□□□□ -0.34
SCNN1A-202ENST00000338748 RPS10P46783 165 aaKnown RBP12.93□□□□□ -0.34
SCNN1A-202ENST00000338748 SNRPEP62304 92 aaKnown RBP12.93□□□□□ -0.34
SCNN1A-202ENST00000338748 PATE2Q6UY27 113 aa12.93□□□□□ -0.34
SCNN1A-202ENST00000338748 NANPQ8TBE9 248 aa12.93□□□□□ -0.34
SCNN1A-202ENST00000338748 FAM167A-AS1Q96KT0 104 aa12.93□□□□□ -0.34
SCNN1A-202ENST00000338748 FAM103A1Q9BTL3 118 aaKnown RBP12.93□□□□□ -0.34
SCNN1A-202ENST00000338748 GSX1Q9H4S2 264 aaPredicted RBP12.93□□□□□ -0.34
SCNN1A-202ENST00000338748 F11RQ9Y624 299 aaKnown RBP12.93□□□□□ -0.34
SCNN1A-202ENST00000338748 NBR2O15453 112 aa12.93□□□□□ -0.34
SCNN1A-202ENST00000338748 CEACAM3P40198 252 aa12.93□□□□□ -0.34
SCNN1A-202ENST00000338748 HES1Q14469 280 aa12.93□□□□□ -0.34
SCNN1A-202ENST00000338748 C1orf122Q6ZSJ8 110 aa12.93□□□□□ -0.34
SCNN1A-202ENST00000338748 LINC01551Q86U37 167 aa12.93□□□□□ -0.34
SCNN1A-202ENST00000338748 KIR3DL3Q8N743 410 aa12.93□□□□□ -0.34
SCNN1A-202ENST00000338748 NECAP1Q8NC96 275 aa12.93□□□□□ -0.34
SCNN1A-202ENST00000338748 OR1P1Q8NH06 330 aa12.93□□□□□ -0.34
SCNN1A-202ENST00000338748 RNF5Q99942 180 aa12.93□□□□□ -0.34
SCNN1A-202ENST00000338748 ELOVL1Q9BW60 279 aa12.93□□□□□ -0.34
SCNN1A-202ENST00000338748 LRRK2Q5S007 2527 aa12.93□□□□□ -0.34
SCNN1A-202ENST00000338748 PCP4L1A6NKN8 68 aa12.92□□□□□ -0.34
SCNN1A-202ENST00000338748 CLN5O75503 358 aa12.92□□□□□ -0.34
SCNN1A-202ENST00000338748 SLC25A2Q9BXI2 301 aa12.92□□□□□ -0.34
SCNN1A-202ENST00000338748 FBN2P35556 2912 aa12.92□□□□□ -0.34
SCNN1A-202ENST00000338748 IGHV2-70DA0A0C4DH43 119 aa12.92□□□□□ -0.34
SCNN1A-202ENST00000338748 F6UZH7 168 aa12.92□□□□□ -0.34
SCNN1A-202ENST00000338748 MT-CO2P00403 227 aa12.92□□□□□ -0.34
SCNN1A-202ENST00000338748 LPAR2Q9HBW0 351 aa12.92□□□□□ -0.34
SCNN1A-202ENST00000338748 TECRQ9NZ01 308 aaKnown RBP12.92□□□□□ -0.34
SCNN1A-202ENST00000338748 CENPEQ02224 2701 aa12.91□□□□□ -0.34
SCNN1A-202ENST00000338748 NDUFA3O95167 84 aa12.91□□□□□ -0.34
SCNN1A-202ENST00000338748 TBX15Q96SF7 602 aa12.91□□□□□ -0.34
SCNN1A-202ENST00000338748 DNAJC4Q9NNZ3 241 aa12.91□□□□□ -0.34
SCNN1A-202ENST00000338748 FAM208BQ5VWN6 2430 aa12.91□□□□□ -0.34
SCNN1A-202ENST00000338748 GGTLC3B5MD39 225 aa12.9□□□□□ -0.34
SCNN1A-202ENST00000338748 CNIH1O95406 144 aa12.9□□□□□ -0.34
SCNN1A-202ENST00000338748 C8orf88P0DMB2 117 aa12.9□□□□□ -0.34
SCNN1A-202ENST00000338748 NPBQ8NG41 125 aa12.9□□□□□ -0.34
SCNN1A-202ENST00000338748 OR4X1Q8NH49 305 aa12.9□□□□□ -0.34
SCNN1A-202ENST00000338748 TNFRSF19Q9NS68 423 aa12.9□□□□□ -0.34
SCNN1A-202ENST00000338748 COX7A2P2O60397 106 aa12.9□□□□□ -0.34
SCNN1A-202ENST00000338748 PYYP10082 97 aa12.9□□□□□ -0.34
SCNN1A-202ENST00000338748 HNF1AP20823 631 aa12.9□□□□□ -0.34
SCNN1A-202ENST00000338748 PQLC2Q6ZP29 291 aa12.9□□□□□ -0.34
SCNN1A-202ENST00000338748 MRPL41Q8IXM3 137 aaKnown RBP12.9□□□□□ -0.34
SCNN1A-202ENST00000338748 TMEM116Q8NCL8 245 aa12.9□□□□□ -0.34
SCNN1A-202ENST00000338748 AJUBAQ96IF1 538 aa12.9□□□□□ -0.34
SCNN1A-202ENST00000338748 BBC3Q96PG8 261 aaPredicted RBP12.9□□□□□ -0.34
SCNN1A-202ENST00000338748 TXNDC17Q9BRA2 123 aa12.9□□□□□ -0.34
SCNN1A-202ENST00000338748 C19orf24Q9BVV8 132 aa12.9□□□□□ -0.34
SCNN1A-202ENST00000338748 CTDSP1Q9GZU7 261 aa12.9□□□□□ -0.34
SCNN1A-202ENST00000338748 ZNF355PQ9NSJ1 428 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms