RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 NIPSNAP3BQ9BS92 247 aa12.9□□□□□ -0.34
HPS1-202ENST00000338546 WNT10AQ9GZT5 417 aa12.9□□□□□ -0.34
HPS1-202ENST00000338546 MEGF9Q9H1U4 602 aa12.9□□□□□ -0.34
HPS1-202ENST00000338546 TMPRSS5Q9H3S3 457 aa12.9□□□□□ -0.34
HPS1-202ENST00000338546 LRRK2Q5S007 2527 aa12.9□□□□□ -0.34
HPS1-202ENST00000338546 IGKV1D-37A0A075B6S9 117 aa12.9□□□□□ -0.35
HPS1-202ENST00000338546 CLN5O75503 358 aa12.9□□□□□ -0.35
HPS1-202ENST00000338546 RND2P52198 227 aa12.9□□□□□ -0.35
HPS1-202ENST00000338546 TAS2R45P59539 299 aa12.9□□□□□ -0.35
HPS1-202ENST00000338546 CD81P60033 236 aa12.9□□□□□ -0.35
HPS1-202ENST00000338546 CX3CL1P78423 397 aa12.9□□□□□ -0.35
HPS1-202ENST00000338546 TTC9CQ8N5M4 171 aa12.9□□□□□ -0.35
HPS1-202ENST00000338546 Q8N9W7 124 aa12.9□□□□□ -0.35
HPS1-202ENST00000338546 SLC25A33Q9BSK2 321 aa12.9□□□□□ -0.35
HPS1-202ENST00000338546 SEPSECSQ9HD40 501 aaKnown RBP12.9□□□□□ -0.35
HPS1-202ENST00000338546 TECRQ9NZ01 308 aaKnown RBP12.9□□□□□ -0.35
HPS1-202ENST00000338546 PSMB11A5LHX3 300 aa12.89□□□□□ -0.35
HPS1-202ENST00000338546 I3L2K1 104 aa12.89□□□□□ -0.35
HPS1-202ENST00000338546 DEFA4P12838 97 aa12.89□□□□□ -0.35
HPS1-202ENST00000338546 PNRC1Q12796 327 aaPredicted RBP12.89□□□□□ -0.35
HPS1-202ENST00000338546 FAM78BQ5VT40 261 aa12.89□□□□□ -0.35
HPS1-202ENST00000338546 FAM90A2PQ658T7 463 aa12.89□□□□□ -0.35
HPS1-202ENST00000338546 PQLC2Q6ZP29 291 aa12.89□□□□□ -0.35
HPS1-202ENST00000338546 OR4X1Q8NH49 305 aa12.89□□□□□ -0.35
HPS1-202ENST00000338546 TVP23CQ96ET8 276 aa12.89□□□□□ -0.35
HPS1-202ENST00000338546 RASL11BQ9BPW5 248 aa12.89□□□□□ -0.35
HPS1-202ENST00000338546 DNAJC4Q9NNZ3 241 aa12.89□□□□□ -0.35
HPS1-202ENST00000338546 SPG11Q96JI7 2443 aa12.88□□□□□ -0.35
HPS1-202ENST00000338546 ELOA3CA0A087WX78 387 aaPredicted RBP12.88□□□□□ -0.35
HPS1-202ENST00000338546 H3BQ15 152 aa12.88□□□□□ -0.35
HPS1-202ENST00000338546 PDE6DO43924 150 aa12.88□□□□□ -0.35
HPS1-202ENST00000338546 ARL14EPLP0DKL9 152 aa12.88□□□□□ -0.35
HPS1-202ENST00000338546 PAX6P26367 422 aa12.88□□□□□ -0.35
HPS1-202ENST00000338546 BPIFB3P59826 476 aa12.88□□□□□ -0.35
HPS1-202ENST00000338546 AWAT1Q58HT5 328 aa12.88□□□□□ -0.35
HPS1-202ENST00000338546 NRGNQ92686 78 aa12.88□□□□□ -0.35
HPS1-202ENST00000338546 TMEM68Q96MH6 324 aa12.88□□□□□ -0.35
HPS1-202ENST00000338546 TUBA4BQ9H853 241 aa12.88□□□□□ -0.35
HPS1-202ENST00000338546 SMCO4Q9NRQ5 59 aa12.88□□□□□ -0.35
HPS1-202ENST00000338546 TMEM167BQ9NRX6 74 aa12.88□□□□□ -0.35
HPS1-202ENST00000338546 TNFRSF19Q9NS68 423 aa12.88□□□□□ -0.35
HPS1-202ENST00000338546 DMRT1Q9Y5R6 373 aa12.88□□□□□ -0.35
HPS1-202ENST00000338546 ABCA2Q9BZC7 2435 aa12.88□□□□□ -0.35
HPS1-202ENST00000338546 C7orf77A4D0Y5 90 aa12.87□□□□□ -0.35
HPS1-202ENST00000338546 FAM74A7A6NL05 159 aa12.87□□□□□ -0.35
HPS1-202ENST00000338546 B4DEV8 164 aa12.87□□□□□ -0.35
HPS1-202ENST00000338546 F6UZH7 168 aa12.87□□□□□ -0.35
HPS1-202ENST00000338546 J3QLI3 93 aa12.87□□□□□ -0.35
HPS1-202ENST00000338546 M0R036 132 aa12.87□□□□□ -0.35
HPS1-202ENST00000338546 PAGE4O60829 102 aa12.87□□□□□ -0.35
HPS1-202ENST00000338546 GCHFRP30047 84 aa12.87□□□□□ -0.35
HPS1-202ENST00000338546 IQCF2Q8IXL9 164 aa12.87□□□□□ -0.35
HPS1-202ENST00000338546 LINC01356Q8N9X3 169 aa12.87□□□□□ -0.35
HPS1-202ENST00000338546 C7orf69Q9H7B7 122 aa12.87□□□□□ -0.35
HPS1-202ENST00000338546 MRPL36Q9P0J6 103 aaKnown RBP12.87□□□□□ -0.35
HPS1-202ENST00000338546 PUS1Q9Y606 427 aaKnown RBP eCLIP12.87□□□□□ -0.35
HPS1-202ENST00000338546 KMT2BQ9UMN6 2715 aaPredicted RBP12.87□□□□□ -0.35
HPS1-202ENST00000338546 A0A096LNT2 108 aa12.86□□□□□ -0.35
HPS1-202ENST00000338546 C11orf94C9JXX5 98 aa12.86□□□□□ -0.35
HPS1-202ENST00000338546 EIF3GO75821 320 aaKnown RBP eCLIP12.86□□□□□ -0.35
HPS1-202ENST00000338546 FABP1P07148 127 aa12.86□□□□□ -0.35
HPS1-202ENST00000338546 C8orf88P0DMB2 117 aa12.86□□□□□ -0.35
HPS1-202ENST00000338546 PLP1P60201 277 aa12.86□□□□□ -0.35
HPS1-202ENST00000338546 LOXL1Q08397 574 aaPredicted RBP12.86□□□□□ -0.35
HPS1-202ENST00000338546 KLK9Q2XQG4 91 aa12.86□□□□□ -0.35
HPS1-202ENST00000338546 FBLN7Q53RD9 439 aa12.86□□□□□ -0.35
HPS1-202ENST00000338546 FAM120AOSQ5T036 256 aa12.86□□□□□ -0.35
HPS1-202ENST00000338546 TMEM37Q8WXS4 190 aa12.86□□□□□ -0.35
HPS1-202ENST00000338546 ZNF48Q96MX3 618 aaPredicted RBP12.86□□□□□ -0.35
HPS1-202ENST00000338546 THYN1Q9P016 225 aa12.86□□□□□ -0.35
HPS1-202ENST00000338546 KLK9Q9UKQ9 250 aa12.86□□□□□ -0.35
HPS1-202ENST00000338546 A0A087WWC5 75 aa12.86□□□□□ -0.35
HPS1-202ENST00000338546 IGHV7-81A0A0B4J1V7 117 aa12.86□□□□□ -0.35
HPS1-202ENST00000338546 APELAP0DMC3 54 aa12.86□□□□□ -0.35
HPS1-202ENST00000338546 GATA2P23769 480 aaPredicted RBP12.86□□□□□ -0.35
HPS1-202ENST00000338546 DEFB113Q30KQ7 82 aa12.86□□□□□ -0.35
HPS1-202ENST00000338546 MIR17HGQ75NE6 70 aa12.86□□□□□ -0.35
HPS1-202ENST00000338546 OR4F5Q8NH21 305 aa12.86□□□□□ -0.35
HPS1-202ENST00000338546 MBD6Q96DN6 1003 aa12.86□□□□□ -0.35
HPS1-202ENST00000338546 OR4F4Q96R69 305 aa12.86□□□□□ -0.35
HPS1-202ENST00000338546 RPS10P5Q9NQ39 176 aa12.86□□□□□ -0.35
HPS1-202ENST00000338546 HIF1ANQ9NWT6 349 aa12.86□□□□□ -0.35
HPS1-202ENST00000338546 IGLV11-55A0A075B6I3 123 aa12.85□□□□□ -0.35
HPS1-202ENST00000338546 TRAV40A0A0B4J280 105 aa12.85□□□□□ -0.35
HPS1-202ENST00000338546 COX7A2P2O60397 106 aa12.85□□□□□ -0.35
HPS1-202ENST00000338546 HIST1H1BP16401 226 aaKnown RBP12.85□□□□□ -0.35
HPS1-202ENST00000338546 CEBPGP53567 150 aa12.85□□□□□ -0.35
HPS1-202ENST00000338546 ZNF90Q03938 601 aa12.85□□□□□ -0.35
HPS1-202ENST00000338546 ASPHD1Q5U4P2 390 aa12.85□□□□□ -0.35
HPS1-202ENST00000338546 C10orf113Q5VZT2 155 aa12.85□□□□□ -0.35
HPS1-202ENST00000338546 SPATA31B1PQ5VZV4 182 aa12.85□□□□□ -0.35
HPS1-202ENST00000338546 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.85□□□□□ -0.35
HPS1-202ENST00000338546 TRAV30A0A087WSZ9 112 aa12.84□□□□□ -0.35
HPS1-202ENST00000338546 ZNF727A8MUV8 499 aa12.84□□□□□ -0.35
HPS1-202ENST00000338546 J3QKU1 62 aa12.84□□□□□ -0.35
HPS1-202ENST00000338546 K7EIM0 57 aa12.84□□□□□ -0.35
HPS1-202ENST00000338546 IGLC1P0CG04 106 aa12.84□□□□□ -0.35
HPS1-202ENST00000338546 PLA2G2AP14555 144 aa12.84□□□□□ -0.35
HPS1-202ENST00000338546 PRSS57Q6UWY2 283 aa12.84□□□□□ -0.35
HPS1-202ENST00000338546 STXBP6Q8NFX7 210 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms