RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 HOXD3P31249 432 aaPredicted RBP11.82□□□□□ -0.52
SEC13-201ENST00000337354 ARL3P36405 182 aa11.82□□□□□ -0.52
SEC13-201ENST00000337354 RRAS2P62070 204 aaPredicted RBP11.82□□□□□ -0.52
SEC13-201ENST00000337354 CD69Q07108 199 aa11.82□□□□□ -0.52
SEC13-201ENST00000337354 RPEL1Q2QD12 228 aa11.82□□□□□ -0.52
SEC13-201ENST00000337354 Q56UQ5 140 aa11.82□□□□□ -0.52
SEC13-201ENST00000337354 ACSM6Q6P461 480 aa11.82□□□□□ -0.52
SEC13-201ENST00000337354 OR4X1Q8NH49 305 aa11.82□□□□□ -0.52
SEC13-201ENST00000337354 FNDC4Q9H6D8 234 aaPredicted RBP11.82□□□□□ -0.52
SEC13-201ENST00000337354 TRAV30A0A087WSZ9 112 aa11.81□□□□□ -0.52
SEC13-201ENST00000337354 F8W735 103 aaPredicted RBP11.81□□□□□ -0.52
SEC13-201ENST00000337354 BMPR1BO00238 502 aa11.81□□□□□ -0.52
SEC13-201ENST00000337354 NUPL2O15504 423 aaKnown RBP11.81□□□□□ -0.52
SEC13-201ENST00000337354 TGOLN2O43493 480 aa11.81□□□□□ -0.52
SEC13-201ENST00000337354 GNG7O60262 68 aa11.81□□□□□ -0.52
SEC13-201ENST00000337354 SCGB2A1O75556 95 aa11.81□□□□□ -0.52
SEC13-201ENST00000337354 SCAF4O95104 1147 aaKnown RBP11.81□□□□□ -0.52
SEC13-201ENST00000337354 CXCL3P19876 107 aa11.81□□□□□ -0.52
SEC13-201ENST00000337354 GPR183P32249 361 aa11.81□□□□□ -0.52
SEC13-201ENST00000337354 S100A10P60903 97 aa11.81□□□□□ -0.52
SEC13-201ENST00000337354 KLF5Q13887 457 aaPredicted RBP11.81□□□□□ -0.52
SEC13-201ENST00000337354 FCN2Q15485 313 aa11.81□□□□□ -0.52
SEC13-201ENST00000337354 MLANAQ16655 118 aa11.81□□□□□ -0.52
SEC13-201ENST00000337354 TMEM14EPQ6UXP3 125 aa11.81□□□□□ -0.52
SEC13-201ENST00000337354 GPHB5Q86YW7 130 aa11.81□□□□□ -0.52
SEC13-201ENST00000337354 UBAC2Q8NBM4 344 aa11.81□□□□□ -0.52
SEC13-201ENST00000337354 TMEM116Q8NCL8 245 aa11.81□□□□□ -0.52
SEC13-201ENST00000337354 PPP1R1CQ8WVI7 109 aa11.81□□□□□ -0.52
SEC13-201ENST00000337354 OR4C12Q96R67 309 aa11.81□□□□□ -0.52
SEC13-201ENST00000337354 PAIP2BQ9ULR5 123 aaKnown RBP11.81□□□□□ -0.52
SEC13-201ENST00000337354 OR2T8A6NH00 312 aa11.8□□□□□ -0.52
SEC13-201ENST00000337354 PPP5D1E7EU14 171 aa11.8□□□□□ -0.52
SEC13-201ENST00000337354 H3BP45 60 aa11.8□□□□□ -0.52
SEC13-201ENST00000337354 CLN5O75503 358 aa11.8□□□□□ -0.52
SEC13-201ENST00000337354 DEDDO75618 318 aa11.8□□□□□ -0.52
SEC13-201ENST00000337354 CTSGP08311 255 aa11.8□□□□□ -0.52
SEC13-201ENST00000337354 PET100P0DJ07 73 aa11.8□□□□□ -0.52
SEC13-201ENST00000337354 CD33P20138 364 aa11.8□□□□□ -0.52
SEC13-201ENST00000337354 OR11H7Q8NGC8 314 aa11.8□□□□□ -0.52
SEC13-201ENST00000337354 DLX4Q92988 240 aaPredicted RBP11.8□□□□□ -0.52
SEC13-201ENST00000337354 MCRIP2Q9BUT9 160 aaKnown RBP11.8□□□□□ -0.52
SEC13-201ENST00000337354 C11orf1Q9H5F2 150 aa11.8□□□□□ -0.52
SEC13-201ENST00000337354 NBEAL1Q6ZS30 2694 aa11.8□□□□□ -0.52
SEC13-201ENST00000337354 WNK1Q9H4A3 2382 aa11.8□□□□□ -0.52
SEC13-201ENST00000337354 E5RGE8 158 aa11.79□□□□□ -0.52
SEC13-201ENST00000337354 OR2C1O95371 312 aa11.79□□□□□ -0.52
SEC13-201ENST00000337354 IGHV3-48P01763 117 aa11.79□□□□□ -0.52
SEC13-201ENST00000337354 SLURP1P55000 103 aa11.79□□□□□ -0.52
SEC13-201ENST00000337354 RELQ04864 619 aaPredicted RBP11.79□□□□□ -0.52
SEC13-201ENST00000337354 FAM106AQ4KMX7 169 aa11.79□□□□□ -0.52
SEC13-201ENST00000337354 PRSS54Q6PEW0 395 aa11.79□□□□□ -0.52
SEC13-201ENST00000337354 C1QL4Q86Z23 238 aa11.79□□□□□ -0.52
SEC13-201ENST00000337354 OR10P1Q8NGE3 313 aa11.79□□□□□ -0.52
SEC13-201ENST00000337354 DCUN1D4Q92564 292 aa11.79□□□□□ -0.52
SEC13-201ENST00000337354 ZNF436Q9C0F3 470 aaPredicted RBP11.79□□□□□ -0.52
SEC13-201ENST00000337354 PMS2P5A8MQ11 134 aa11.79□□□□□ -0.52
SEC13-201ENST00000337354 PRSS46E5RG02 174 aa11.79□□□□□ -0.52
SEC13-201ENST00000337354 LGALS9O00182 355 aa11.79□□□□□ -0.52
SEC13-201ENST00000337354 OVOL1O14753 267 aa11.79□□□□□ -0.52
SEC13-201ENST00000337354 MPC2O95563 127 aa11.79□□□□□ -0.52
SEC13-201ENST00000337354 BCAP31P51572 246 aa11.79□□□□□ -0.52
SEC13-201ENST00000337354 CAV2P51636 162 aa11.79□□□□□ -0.52
SEC13-201ENST00000337354 LRRC37A5PQ49AS3 106 aa11.79□□□□□ -0.52
SEC13-201ENST00000337354 SLC16A13Q7RTY0 426 aa11.79□□□□□ -0.52
SEC13-201ENST00000337354 RCC1LQ96I51 464 aaKnown RBP11.79□□□□□ -0.52
SEC13-201ENST00000337354 SLC35E1Q96K37 410 aa11.79□□□□□ -0.52
SEC13-201ENST00000337354 LYRM2Q9NU23 88 aaPredicted RBP11.79□□□□□ -0.52
SEC13-201ENST00000337354 GIPP09681 153 aaPredicted RBP11.78□□□□□ -0.52
SEC13-201ENST00000337354 METTL15P1P0C7V9 234 aa11.78□□□□□ -0.52
SEC13-201ENST00000337354 ADMP35318 185 aa11.78□□□□□ -0.52
SEC13-201ENST00000337354 P2RY1P47900 373 aa11.78□□□□□ -0.52
SEC13-201ENST00000337354 RND2P52198 227 aa11.78□□□□□ -0.52
SEC13-201ENST00000337354 FGL1Q08830 312 aa11.78□□□□□ -0.52
SEC13-201ENST00000337354 GAMTQ14353 236 aa11.78□□□□□ -0.52
SEC13-201ENST00000337354 Q6ZNX1 250 aa11.78□□□□□ -0.52
SEC13-201ENST00000337354 NPIPB3Q92617 1050 aa11.78□□□□□ -0.52
SEC13-201ENST00000337354 CHRDL1Q9BU40 450 aa11.78□□□□□ -0.52
SEC13-201ENST00000337354 GGACTQ9BVM4 153 aa11.78□□□□□ -0.52
SEC13-201ENST00000337354 PEMTQ9UBM1 199 aa11.78□□□□□ -0.52
SEC13-201ENST00000337354 FNDC10F2Z333 226 aa11.77□□□□□ -0.53
SEC13-201ENST00000337354 H0YIZ8 118 aa11.77□□□□□ -0.53
SEC13-201ENST00000337354 NDUFA4O00483 81 aa11.77□□□□□ -0.53
SEC13-201ENST00000337354 SYNJ2BPP57105 145 aa11.77□□□□□ -0.53
SEC13-201ENST00000337354 OR8G2PQ6IF36 304 aa11.77□□□□□ -0.53
SEC13-201ENST00000337354 REC114Q7Z4M0 266 aa11.77□□□□□ -0.53
SEC13-201ENST00000337354 TMEM252Q8N6L7 170 aa11.77□□□□□ -0.53
SEC13-201ENST00000337354 OR9G4Q8NGQ1 327 aa11.77□□□□□ -0.53
SEC13-201ENST00000337354 OR1S2Q8NGQ3 325 aa11.77□□□□□ -0.53
SEC13-201ENST00000337354 WDR89Q96FK6 387 aaPredicted RBP11.77□□□□□ -0.53
SEC13-201ENST00000337354 ACY3Q96HD9 319 aa11.77□□□□□ -0.53
SEC13-201ENST00000337354 RNF126Q9BV68 326 aa11.77□□□□□ -0.53
SEC13-201ENST00000337354 ELOVL1Q9BW60 279 aa11.77□□□□□ -0.53
SEC13-201ENST00000337354 GPR61Q9BZJ8 451 aa11.77□□□□□ -0.53
SEC13-201ENST00000337354 SLC25A31Q9H0C2 315 aa11.77□□□□□ -0.53
SEC13-201ENST00000337354 ZC4H2Q9NQZ6 224 aa11.77□□□□□ -0.53
SEC13-201ENST00000337354 MRPL36Q9P0J6 103 aaKnown RBP11.77□□□□□ -0.53
SEC13-201ENST00000337354 MGAM2Q2M2H8 2515 aa11.77□□□□□ -0.53
SEC13-201ENST00000337354 FAM24AA6NFZ4 105 aa11.76□□□□□ -0.53
SEC13-201ENST00000337354 IGLC1P0CG04 106 aa11.76□□□□□ -0.53
SEC13-201ENST00000337354 SULT1A1P50225 295 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms