RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 LAIR2Q6ISS4 152 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 ATRAIDQ6UW56 229 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 SRSF8Q9BRL6 282 aaKnown RBP4.63□□□□□ -1.67
PTPRB-202ENST00000334414 MUC21A0A0G2JKD1 596 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 MUC21A0A140T8X8 626 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 M0R381 172 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 SLC25A16P16260 332 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 MUC21Q5SSG8 566 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 Q6ZS52 159 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 KLF14Q8TD94 323 aaPredicted RBP4.63□□□□□ -1.67
PTPRB-202ENST00000334414 NPIPB3Q92617 1050 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 SIP14410 1827 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 PEBP1P30086 187 aaKnown RBP4.63□□□□□ -1.67
PTPRB-202ENST00000334414 DRD3P35462 400 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 ID3Q02535 119 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 DUX3Q96PT4 197 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 IGHV2-26A0A0B4J1V2 119 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 MSGN1A6NI15 193 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 K7EP13 123 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 CCL3P10147 92 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 UBL5Q9BZL1 73 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 GREB1LQ9C091 1923 aaPredicted RBP4.63□□□□□ -1.67
PTPRB-202ENST00000334414 TRBV6-6A0A0A6YYG2 114 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 CDK2AP2O75956 126 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 MYF5P13349 255 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 ZNF492Q9P255 531 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 EVI2AP22794 236 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 LPAL2Q16609 132 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 HCP5Q6MZN7 132 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 CLEC2AQ6UVW9 174 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 A0A1W2PPM0 123 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 SLC25A53Q5H9E4 307 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 UCN2Q96RP3 112 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 CCL13Q99616 98 aa4.63□□□□□ -1.67
PTPRB-202ENST00000334414 PSG3Q16557 428 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 DPH3P1Q9H4G8 78 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 TRAV12-3A0A0B4J271 114 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 GAGE12JA6NER3 117 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 SHISA7A6NL88 538 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 GAGE7O76087 117 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 GAGE12FP0CL80 117 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 GAGE12GP0CL81 117 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 GAGE12IP0CL82 117 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 TDGF1P13385 188 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 PRTN3P24158 256 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 SRSF3P84103 164 aaKnown RBP4.62□□□□□ -1.67
PTPRB-202ENST00000334414 GAGE4Q13068 117 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 MIR17HGQ75NE6 70 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 HAPLN4Q86UW8 402 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 D6R8Y8 96 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 SNAI2O43623 268 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 EFEMP2O95967 443 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 ZNF385AQ96PM9 386 aaKnown RBP4.62□□□□□ -1.67
PTPRB-202ENST00000334414 TRGV9Q99603 122 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 SCN1AP35498 2009 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 TMEM167AQ8TBQ9 72 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 HCSTQ9UBK5 93 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 DTX4Q9Y2E6 619 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 GLMPQ8WWB7 406 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 CYTL1Q9NRR1 136 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 PLA2G3Q9NZ20 509 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 NUP205Q92621 2012 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 IGHV5-10-1A0A0J9YXX1 117 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 FOXH1O75593 365 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 C3orf79P0CE67 100 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 SLC25A28Q96A46 364 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 CCDC88CQ9P219 2028 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 NBR2O15453 112 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 REG1BP48304 166 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 MESP1Q9BRJ9 268 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 TMEM171Q8WVE6 324 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 POLR3KQ9Y2Y1 108 aaPredicted RBP4.62□□□□□ -1.67
PTPRB-202ENST00000334414 IGHV3-21A0A0B4J1V1 117 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 TIAF1O95411 115 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 SAA1P0DJI8 122 aaPredicted RBP4.62□□□□□ -1.67
PTPRB-202ENST00000334414 ZNF664Q8N3J9 261 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 TIMM21Q9BVV7 248 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 DOCK5Q9H7D0 1870 aa4.62□□□□□ -1.67
PTPRB-202ENST00000334414 ZAR1Q86SH2 424 aa4.61□□□□□ -1.67
PTPRB-202ENST00000334414 SAA2-SAA4A0A096LPE2 208 aa4.61□□□□□ -1.67
PTPRB-202ENST00000334414 PRR32B1ATL7 298 aa4.61□□□□□ -1.67
PTPRB-202ENST00000334414 C12orf77C9JDV5 145 aa4.61□□□□□ -1.67
PTPRB-202ENST00000334414 FOXS1O43638 330 aa4.61□□□□□ -1.67
PTPRB-202ENST00000334414 RAMP3O60896 148 aa4.61□□□□□ -1.67
PTPRB-202ENST00000334414 SAA2P0DJI9 122 aaPredicted RBP4.61□□□□□ -1.67
PTPRB-202ENST00000334414 SLAQ13239 276 aa4.61□□□□□ -1.67
PTPRB-202ENST00000334414 THSD7AQ9UPZ6 1657 aa4.61□□□□□ -1.67
PTPRB-202ENST00000334414 SCN2AQ99250 2005 aa4.61□□□□□ -1.67
PTPRB-202ENST00000334414 PATE4P0C8F1 98 aa4.61□□□□□ -1.67
PTPRB-202ENST00000334414 TREML4Q6UXN2 200 aa4.61□□□□□ -1.67
PTPRB-202ENST00000334414 VCYO14598 125 aa4.61□□□□□ -1.67
PTPRB-202ENST00000334414 IGHV3-13P01766 116 aa4.61□□□□□ -1.67
PTPRB-202ENST00000334414 IGHV3-7P01780 117 aa4.61□□□□□ -1.67
PTPRB-202ENST00000334414 COX8AP10176 69 aa4.61□□□□□ -1.67
PTPRB-202ENST00000334414 GUSBP11Q6P575 273 aa4.61□□□□□ -1.67
PTPRB-202ENST00000334414 ZIC4Q8N9L1 334 aa4.61□□□□□ -1.67
PTPRB-202ENST00000334414 SMCHD1A6NHR9 2005 aa4.61□□□□□ -1.67
PTPRB-202ENST00000334414 IGHV1OR15-9A0A0B4J2B8 117 aa4.61□□□□□ -1.67
PTPRB-202ENST00000334414 RNASE4P34096 147 aaKnown RBP4.61□□□□□ -1.67
PTPRB-202ENST00000334414 GAGE5Q13069 117 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms