RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 SLC25A33Q9BSK2 321 aa11.8□□□□□ -0.52
SNX20-202ENST00000330943 CLEC5AQ9NY25 188 aa11.8□□□□□ -0.52
SNX20-202ENST00000330943 COL12A1Q99715 3063 aa11.79□□□□□ -0.52
SNX20-202ENST00000330943 C19orf67A6NJJ6 358 aa11.79□□□□□ -0.52
SNX20-202ENST00000330943 C9orf172C9J069 976 aa11.79□□□□□ -0.52
SNX20-202ENST00000330943 CT45A1Q5HYN5 189 aa11.79□□□□□ -0.52
SNX20-202ENST00000330943 CT45A3Q8NHU0 189 aa11.79□□□□□ -0.52
SNX20-202ENST00000330943 WIPF2Q8TF74 440 aaPredicted RBP11.79□□□□□ -0.52
SNX20-202ENST00000330943 TRIB1Q96RU8 372 aa11.79□□□□□ -0.52
SNX20-202ENST00000330943 A0A1W2PN81 502 aa11.79□□□□□ -0.52
SNX20-202ENST00000330943 H0YJW9 148 aa11.79□□□□□ -0.52
SNX20-202ENST00000330943 K7EP13 123 aa11.79□□□□□ -0.52
SNX20-202ENST00000330943 SRSF6Q13247 344 aaKnown RBP11.79□□□□□ -0.52
SNX20-202ENST00000330943 RTL8BQ17RB0 113 aa11.79□□□□□ -0.52
SNX20-202ENST00000330943 RNF151Q2KHN1 245 aa11.79□□□□□ -0.52
SNX20-202ENST00000330943 SPATA12Q7Z6I5 190 aa11.79□□□□□ -0.52
SNX20-202ENST00000330943 MUC15Q8N387 334 aa11.79□□□□□ -0.52
SNX20-202ENST00000330943 PNKDQ8N490 385 aa11.79□□□□□ -0.52
SNX20-202ENST00000330943 CNEP1R1Q8N9A8 125 aa11.79□□□□□ -0.52
SNX20-202ENST00000330943 SNRNP40Q96DI7 357 aaKnown RBP11.79□□□□□ -0.52
SNX20-202ENST00000330943 C2orf70A6NJV1 201 aa11.78□□□□□ -0.52
SNX20-202ENST00000330943 SAPCD1Q5SSQ6 148 aa11.78□□□□□ -0.52
SNX20-202ENST00000330943 ARL6IP6Q8N6S5 226 aa11.78□□□□□ -0.52
SNX20-202ENST00000330943 PPP1R35Q8TAP8 253 aa11.78□□□□□ -0.52
SNX20-202ENST00000330943 OR2V2Q96R30 315 aa11.78□□□□□ -0.52
SNX20-202ENST00000330943 IGHV2-70DA0A0C4DH43 119 aa11.78□□□□□ -0.52
SNX20-202ENST00000330943 ITGB1BP1O14713 200 aa11.78□□□□□ -0.52
SNX20-202ENST00000330943 VAMP3Q15836 100 aa11.78□□□□□ -0.52
SNX20-202ENST00000330943 RASL11AQ6T310 242 aa11.78□□□□□ -0.52
SNX20-202ENST00000330943 NUDT10Q8NFP7 164 aa11.78□□□□□ -0.52
SNX20-202ENST00000330943 NUDT11Q96G61 164 aa11.78□□□□□ -0.52
SNX20-202ENST00000330943 AMMECR1Q9Y4X0 333 aaPredicted RBP11.78□□□□□ -0.52
SNX20-202ENST00000330943 TPRP12270 2363 aaKnown RBP11.78□□□□□ -0.52
SNX20-202ENST00000330943 ZZEF1O43149 2961 aa11.78□□□□□ -0.52
SNX20-202ENST00000330943 SRRM5B3KS81 715 aa11.77□□□□□ -0.52
SNX20-202ENST00000330943 IGKV3-15P01624 115 aa11.77□□□□□ -0.52
SNX20-202ENST00000330943 CECR9P0C854 216 aa11.77□□□□□ -0.52
SNX20-202ENST00000330943 CDKN1BP46527 198 aa11.77□□□□□ -0.52
SNX20-202ENST00000330943 COTL1Q14019 142 aa11.77□□□□□ -0.52
SNX20-202ENST00000330943 MDS2Q8NDY4 140 aa11.77□□□□□ -0.52
SNX20-202ENST00000330943 MBD6Q96DN6 1003 aa11.77□□□□□ -0.52
SNX20-202ENST00000330943 SLC25A2Q9BXI2 301 aa11.77□□□□□ -0.52
SNX20-202ENST00000330943 PRNDQ9UKY0 176 aa11.77□□□□□ -0.52
SNX20-202ENST00000330943 PYYP10082 97 aa11.77□□□□□ -0.53
SNX20-202ENST00000330943 PRCDQ00LT1 54 aa11.77□□□□□ -0.53
SNX20-202ENST00000330943 KLF5Q13887 457 aaPredicted RBP11.77□□□□□ -0.53
SNX20-202ENST00000330943 Q6ZT83 130 aa11.77□□□□□ -0.53
SNX20-202ENST00000330943 C19orf24Q9BVV8 132 aa11.77□□□□□ -0.53
SNX20-202ENST00000330943 SH2D7A6NKC9 451 aaPredicted RBP11.76□□□□□ -0.53
SNX20-202ENST00000330943 HIGD1CA8MV81 97 aa11.76□□□□□ -0.53
SNX20-202ENST00000330943 OR2D3Q8NGH3 330 aa11.76□□□□□ -0.53
SNX20-202ENST00000330943 GRAMD2BQ96HH9 432 aa11.76□□□□□ -0.53
SNX20-202ENST00000330943 LOXL4Q96JB6 756 aa11.76□□□□□ -0.53
SNX20-202ENST00000330943 FAM167A-AS1Q96KT0 104 aa11.76□□□□□ -0.53
SNX20-202ENST00000330943 ZPBPQ9BS86 351 aa11.76□□□□□ -0.53
SNX20-202ENST00000330943 CR1LQ2VPA4 569 aa11.76□□□□□ -0.53
SNX20-202ENST00000330943 SPRY4Q9C004 299 aa11.76□□□□□ -0.53
SNX20-202ENST00000330943 CORTO00230 105 aa11.76□□□□□ -0.53
SNX20-202ENST00000330943 CD46P15529 392 aa11.76□□□□□ -0.53
SNX20-202ENST00000330943 MPV17L2Q567V2 206 aa11.76□□□□□ -0.53
SNX20-202ENST00000330943 GCSAMQ8N6F7 178 aa11.76□□□□□ -0.53
SNX20-202ENST00000330943 OR10W1Q8NGF6 305 aa11.76□□□□□ -0.53
SNX20-202ENST00000330943 TMEM70Q9BUB7 260 aa11.76□□□□□ -0.53
SNX20-202ENST00000330943 HEATR1Q9H583 2144 aaKnown RBP11.76□□□□□ -0.53
SNX20-202ENST00000330943 OR4C46A6NHA9 309 aa11.75□□□□□ -0.53
SNX20-202ENST00000330943 C21orf140B9A014 251 aa11.75□□□□□ -0.53
SNX20-202ENST00000330943 M0QZ24 198 aa11.75□□□□□ -0.53
SNX20-202ENST00000330943 PEX7O00628 323 aa11.75□□□□□ -0.53
SNX20-202ENST00000330943 IGKV1-16P04430 117 aa11.75□□□□□ -0.53
SNX20-202ENST00000330943 C17orf58Q2M2W7 97 aa11.75□□□□□ -0.53
SNX20-202ENST00000330943 FAM231DQ6ZW35 169 aa11.75□□□□□ -0.53
SNX20-202ENST00000330943 OR2T6Q8NHC8 308 aa11.75□□□□□ -0.53
SNX20-202ENST00000330943 ZNF596Q8TC21 504 aa11.75□□□□□ -0.53
SNX20-202ENST00000330943 TEX50A0A1B0GTY4 177 aa11.75□□□□□ -0.53
SNX20-202ENST00000330943 UPK2O00526 184 aa11.75□□□□□ -0.53
SNX20-202ENST00000330943 CA7P43166 264 aa11.75□□□□□ -0.53
SNX20-202ENST00000330943 SPRNQ5BIV9 151 aa11.75□□□□□ -0.53
SNX20-202ENST00000330943 ETFRF1Q6IPR1 90 aa11.75□□□□□ -0.53
SNX20-202ENST00000330943 MRPL32Q9BYC8 188 aaKnown RBP11.75□□□□□ -0.53
SNX20-202ENST00000330943 OR2J3O76001 311 aa11.74□□□□□ -0.53
SNX20-202ENST00000330943 C2orf83Q53S99 150 aa11.74□□□□□ -0.53
SNX20-202ENST00000330943 FAM201AQ5SY85 155 aa11.74□□□□□ -0.53
SNX20-202ENST00000330943 URB1-AS1Q96HZ7 61 aa11.74□□□□□ -0.53
SNX20-202ENST00000330943 SGK494Q96LW2 274 aa11.74□□□□□ -0.53
SNX20-202ENST00000330943 RNF24Q9Y225 148 aa11.74□□□□□ -0.53
SNX20-202ENST00000330943 ZNF257Q9Y2Q1 563 aa11.74□□□□□ -0.53
SNX20-202ENST00000330943 COL27A1Q8IZC6 1860 aaPredicted RBP11.74□□□□□ -0.53
SNX20-202ENST00000330943 SRRM4A7MD48 611 aaKnown RBP11.74□□□□□ -0.53
SNX20-202ENST00000330943 VWC2LB2RUY7 222 aa11.74□□□□□ -0.53
SNX20-202ENST00000330943 RNASE2P10153 161 aaKnown RBP11.74□□□□□ -0.53
SNX20-202ENST00000330943 ACP1P24666 158 aa11.74□□□□□ -0.53
SNX20-202ENST00000330943 CD24P25063 80 aa11.74□□□□□ -0.53
SNX20-202ENST00000330943 FOXA3P55318 350 aaPredicted RBP11.74□□□□□ -0.53
SNX20-202ENST00000330943 CD69Q07108 199 aa11.74□□□□□ -0.53
SNX20-202ENST00000330943 ZNF329Q86UD4 541 aa11.74□□□□□ -0.53
SNX20-202ENST00000330943 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.74□□□□□ -0.53
SNX20-202ENST00000330943 TACC2O95359 2948 aa11.74□□□□□ -0.53
SNX20-202ENST00000330943 COX7A2P2O60397 106 aa11.73□□□□□ -0.53
SNX20-202ENST00000330943 SP9P0CG40 484 aa11.73□□□□□ -0.53
SNX20-202ENST00000330943 GNG5P63218 68 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms