RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 NDUFS6O75380 124 aaKnown RBP13.46□□□□□ -0.25
DDX41-201ENST00000330503 COX6B1P14854 86 aa13.46□□□□□ -0.25
DDX41-201ENST00000330503 SAA4P35542 130 aa13.46□□□□□ -0.25
DDX41-201ENST00000330503 RND2P52198 227 aa13.46□□□□□ -0.25
DDX41-201ENST00000330503 FXYD3Q14802 87 aa13.46□□□□□ -0.25
DDX41-201ENST00000330503 FAM78BQ5VT40 261 aa13.46□□□□□ -0.25
DDX41-201ENST00000330503 PIP4P2Q8N4L2 257 aa13.46□□□□□ -0.25
DDX41-201ENST00000330503 NIPSNAP3BQ9BS92 247 aa13.46□□□□□ -0.25
DDX41-201ENST00000330503 ZNF90Q03938 601 aa13.46□□□□□ -0.26
DDX41-201ENST00000330503 OR4F5Q8NH21 305 aa13.46□□□□□ -0.26
DDX41-201ENST00000330503 TMEM37Q8WXS4 190 aa13.46□□□□□ -0.26
DDX41-201ENST00000330503 OR4F4Q96R69 305 aa13.46□□□□□ -0.26
DDX41-201ENST00000330503 WNT10AQ9GZT5 417 aa13.46□□□□□ -0.26
DDX41-201ENST00000330503 FUT9Q9Y231 359 aa13.46□□□□□ -0.26
DDX41-201ENST00000330503 IGHV3-21A0A0B4J1V1 117 aa13.45□□□□□ -0.26
DDX41-201ENST00000330503 TCRBV4S1A1TA0A5B7 111 aa13.45□□□□□ -0.26
DDX41-201ENST00000330503 COLCA2A8K830 154 aa13.45□□□□□ -0.26
DDX41-201ENST00000330503 NPFFO15130 113 aa13.45□□□□□ -0.26
DDX41-201ENST00000330503 PAX1P15863 534 aa13.45□□□□□ -0.26
DDX41-201ENST00000330503 NPPCP23582 126 aa13.45□□□□□ -0.26
DDX41-201ENST00000330503 GCHFRP30047 84 aa13.45□□□□□ -0.26
DDX41-201ENST00000330503 UBE2G2P60604 165 aa13.45□□□□□ -0.26
DDX41-201ENST00000330503 ETFRF1Q6IPR1 90 aa13.45□□□□□ -0.26
DDX41-201ENST00000330503 TMEM250H0YL14 139 aa13.45□□□□□ -0.26
DDX41-201ENST00000330503 OR5G3P0C626 314 aa13.45□□□□□ -0.26
DDX41-201ENST00000330503 CTRB1P17538 263 aa13.45□□□□□ -0.26
DDX41-201ENST00000330503 CTRB2Q6GPI1 263 aa13.45□□□□□ -0.26
DDX41-201ENST00000330503 FAM103A1Q9BTL3 118 aaKnown RBP13.45□□□□□ -0.26
DDX41-201ENST00000330503 NCBP2LA6PVI3 153 aaKnown RBP13.44□□□□□ -0.26
DDX41-201ENST00000330503 C11orf94C9JXX5 98 aa13.44□□□□□ -0.26
DDX41-201ENST00000330503 MT-CO2P00403 227 aa13.44□□□□□ -0.26
DDX41-201ENST00000330503 TMEM11P17152 192 aa13.44□□□□□ -0.26
DDX41-201ENST00000330503 CX3CL1P78423 397 aa13.44□□□□□ -0.26
DDX41-201ENST00000330503 ZNF562Q6V9R5 426 aa13.44□□□□□ -0.26
DDX41-201ENST00000330503 TMEM116Q8NCL8 245 aa13.44□□□□□ -0.26
DDX41-201ENST00000330503 C19orf24Q9BVV8 132 aa13.44□□□□□ -0.26
DDX41-201ENST00000330503 SDF2L1Q9HCN8 221 aa13.44□□□□□ -0.26
DDX41-201ENST00000330503 I3L2K1 104 aa13.43□□□□□ -0.26
DDX41-201ENST00000330503 CORTO00230 105 aa13.43□□□□□ -0.26
DDX41-201ENST00000330503 ATP5G3P48201 142 aa13.43□□□□□ -0.26
DDX41-201ENST00000330503 PATE2Q6UY27 113 aa13.43□□□□□ -0.26
DDX41-201ENST00000330503 ZNF503Q96F45 646 aa13.43□□□□□ -0.26
DDX41-201ENST00000330503 TUBA4BQ9H853 241 aa13.43□□□□□ -0.26
DDX41-201ENST00000330503 DNAJC4Q9NNZ3 241 aa13.43□□□□□ -0.26
DDX41-201ENST00000330503 ZNF727A8MUV8 499 aa13.43□□□□□ -0.26
DDX41-201ENST00000330503 FAM106CPP0CH98 169 aa13.43□□□□□ -0.26
DDX41-201ENST00000330503 ASPHD1Q5U4P2 390 aa13.43□□□□□ -0.26
DDX41-201ENST00000330503 CST9LP1Q5W188 147 aa13.43□□□□□ -0.26
DDX41-201ENST00000330503 NANPQ8TBE9 248 aa13.43□□□□□ -0.26
DDX41-201ENST00000330503 TNFRSF19Q9NS68 423 aa13.43□□□□□ -0.26
DDX41-201ENST00000330503 YTHDF2Q9Y5A9 579 aaKnown RBP13.43□□□□□ -0.26
DDX41-201ENST00000330503 SVEP1Q4LDE5 3571 aa13.43□□□□□ -0.26
DDX41-201ENST00000330503 CRYBG3Q68DQ2 2970 aa13.42□□□□□ -0.26
DDX41-201ENST00000330503 ATF4P18848 351 aaPredicted RBP13.42□□□□□ -0.26
DDX41-201ENST00000330503 NDPQ00604 133 aa13.42□□□□□ -0.26
DDX41-201ENST00000330503 RPUSD4Q96CM3 377 aaKnown RBP13.42□□□□□ -0.26
DDX41-201ENST00000330503 TECRQ9NZ01 308 aaKnown RBP13.42□□□□□ -0.26
DDX41-201ENST00000330503 FAM208BQ5VWN6 2430 aa13.42□□□□□ -0.26
DDX41-201ENST00000330503 LOC105371267A0A1B0GV96 52 aa13.42□□□□□ -0.26
DDX41-201ENST00000330503 SELENOTP62341 195 aa13.42□□□□□ -0.26
DDX41-201ENST00000330503 MORN5Q5VZ52 161 aa13.42□□□□□ -0.26
DDX41-201ENST00000330503 Q8N9W7 124 aa13.42□□□□□ -0.26
DDX41-201ENST00000330503 ISOC2Q96AB3 205 aa13.42□□□□□ -0.26
DDX41-201ENST00000330503 TRGV9Q99603 122 aa13.42□□□□□ -0.26
DDX41-201ENST00000330503 SMIM7Q9BQ49 75 aa13.42□□□□□ -0.26
DDX41-201ENST00000330503 PARLQ9H300 379 aa13.42□□□□□ -0.26
DDX41-201ENST00000330503 GSX1Q9H4S2 264 aaPredicted RBP13.42□□□□□ -0.26
DDX41-201ENST00000330503 LRRK2Q5S007 2527 aa13.42□□□□□ -0.26
DDX41-201ENST00000330503 IGHV3OR16-10A0A075B7F0 116 aa13.41□□□□□ -0.26
DDX41-201ENST00000330503 TRAV5A0A0B4J249 113 aa13.41□□□□□ -0.26
DDX41-201ENST00000330503 KIAA0141Q14154 515 aaPredicted RBP13.41□□□□□ -0.26
DDX41-201ENST00000330503 ZNF674Q2M3X9 581 aa13.41□□□□□ -0.26
DDX41-201ENST00000330503 C15orf54Q8N8G6 183 aa13.41□□□□□ -0.26
DDX41-201ENST00000330503 FAM167A-AS1Q96KT0 104 aa13.41□□□□□ -0.26
DDX41-201ENST00000330503 A0A087WWC5 75 aa13.4□□□□□ -0.26
DDX41-201ENST00000330503 CLN5O75503 358 aa13.4□□□□□ -0.26
DDX41-201ENST00000330503 EGR2P11161 476 aaPredicted RBP13.4□□□□□ -0.26
DDX41-201ENST00000330503 BRS3P32247 399 aa13.4□□□□□ -0.26
DDX41-201ENST00000330503 DSCR9P59020 149 aa13.4□□□□□ -0.26
DDX41-201ENST00000330503 OR51G1Q8NGK1 321 aa13.4□□□□□ -0.26
DDX41-201ENST00000330503 OR4X1Q8NH49 305 aa13.4□□□□□ -0.26
DDX41-201ENST00000330503 DOK5Q9P104 306 aa13.4□□□□□ -0.26
DDX41-201ENST00000330503 IGHV1-69DA0A0B4J2H0 117 aa13.4□□□□□ -0.26
DDX41-201ENST00000330503 K7EIM0 57 aa13.4□□□□□ -0.26
DDX41-201ENST00000330503 PDE6DO43924 150 aa13.4□□□□□ -0.26
DDX41-201ENST00000330503 IGHV1-69P01742 117 aa13.4□□□□□ -0.26
DDX41-201ENST00000330503 COL8A1P27658 744 aa13.4□□□□□ -0.26
DDX41-201ENST00000330503 TMEM241Q24JQ0 296 aa13.4□□□□□ -0.26
DDX41-201ENST00000330503 KLF17Q5JT82 389 aaPredicted RBP13.4□□□□□ -0.26
DDX41-201ENST00000330503 ARPC1AQ92747 370 aa13.4□□□□□ -0.26
DDX41-201ENST00000330503 YPEL4Q96NS1 127 aa13.4□□□□□ -0.26
DDX41-201ENST00000330503 NAT8Q9UHE5 227 aa13.4□□□□□ -0.26
DDX41-201ENST00000330503 IGHV7-81A0A0B4J1V7 117 aa13.39□□□□□ -0.27
DDX41-201ENST00000330503 C8orf88P0DMB2 117 aa13.39□□□□□ -0.27
DDX41-201ENST00000330503 PNRC1Q12796 327 aaPredicted RBP13.39□□□□□ -0.27
DDX41-201ENST00000330503 OR1L4Q8NGR5 311 aa13.39□□□□□ -0.27
DDX41-201ENST00000330503 HIST1H2BAQ96A08 127 aa13.39□□□□□ -0.27
DDX41-201ENST00000330503 RNF2Q99496 336 aa13.39□□□□□ -0.27
DDX41-201ENST00000330503 TXNDC17Q9BRA2 123 aa13.39□□□□□ -0.27
DDX41-201ENST00000330503 SLC25A2Q9BXI2 301 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms