RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 GTSCR1Q86UQ5 136 aa11.26□□□□□ -0.61
CLRN1-203ENST00000328863 RNASEH2CQ8TDP1 164 aaKnown RBP11.26□□□□□ -0.61
CLRN1-203ENST00000328863 DNAH9Q9NYC9 4486 aa11.26□□□□□ -0.61
CLRN1-203ENST00000328863 IFNA21P01568 189 aa11.25□□□□□ -0.61
CLRN1-203ENST00000328863 CBLN1P23435 193 aa11.25□□□□□ -0.61
CLRN1-203ENST00000328863 ADMP35318 185 aa11.25□□□□□ -0.61
CLRN1-203ENST00000328863 CACNG8Q8WXS5 425 aa11.25□□□□□ -0.61
CLRN1-203ENST00000328863 CHRDL1Q9BU40 450 aa11.25□□□□□ -0.61
CLRN1-203ENST00000328863 C20orf24Q9BUV8 137 aa11.25□□□□□ -0.61
CLRN1-203ENST00000328863 RBKSQ9H477 322 aa11.25□□□□□ -0.61
CLRN1-203ENST00000328863 NUDT15Q9NV35 164 aa11.25□□□□□ -0.61
CLRN1-203ENST00000328863 SMAD5-AS1Q9Y6J3 95 aa11.25□□□□□ -0.61
CLRN1-203ENST00000328863 U3KQ87 197 aa11.25□□□□□ -0.61
CLRN1-203ENST00000328863 FAM240BA0A1B0GVZ2 78 aa11.24□□□□□ -0.61
CLRN1-203ENST00000328863 PITX3O75364 302 aa11.24□□□□□ -0.61
CLRN1-203ENST00000328863 UPK1BO75841 260 aa11.24□□□□□ -0.61
CLRN1-203ENST00000328863 IFNA10P01566 189 aa11.24□□□□□ -0.61
CLRN1-203ENST00000328863 IGHV3-48P01763 117 aa11.24□□□□□ -0.61
CLRN1-203ENST00000328863 TCRBP04435 133 aa11.24□□□□□ -0.61
CLRN1-203ENST00000328863 SLC25A4P12235 298 aa11.24□□□□□ -0.61
CLRN1-203ENST00000328863 CD69Q07108 199 aa11.24□□□□□ -0.61
CLRN1-203ENST00000328863 ASAH1Q13510 395 aa11.24□□□□□ -0.61
CLRN1-203ENST00000328863 CD300EQ496F6 205 aaPredicted RBP11.24□□□□□ -0.61
CLRN1-203ENST00000328863 GGNBP1Q5YKI7 109 aa11.24□□□□□ -0.61
CLRN1-203ENST00000328863 ETFRF1Q6IPR1 90 aa11.24□□□□□ -0.61
CLRN1-203ENST00000328863 ENKURQ8TC29 256 aa11.24□□□□□ -0.61
CLRN1-203ENST00000328863 CIB3Q96Q77 187 aaPredicted RBP11.24□□□□□ -0.61
CLRN1-203ENST00000328863 B9D2Q9BPU9 175 aa11.24□□□□□ -0.61
CLRN1-203ENST00000328863 GINS3Q9BRX5 216 aa11.24□□□□□ -0.61
CLRN1-203ENST00000328863 MRPL27Q9P0M9 148 aaKnown RBP11.24□□□□□ -0.61
CLRN1-203ENST00000328863 LSM4Q9Y4Z0 139 aaKnown RBP11.24□□□□□ -0.61
CLRN1-203ENST00000328863 TRAV6A0A075B6T7 132 aa11.23□□□□□ -0.61
CLRN1-203ENST00000328863 C15orf62A8K5M9 175 aa11.23□□□□□ -0.61
CLRN1-203ENST00000328863 CTSGP08311 255 aa11.23□□□□□ -0.61
CLRN1-203ENST00000328863 EDN2P20800 178 aa11.23□□□□□ -0.61
CLRN1-203ENST00000328863 ATP5IP56385 69 aaPredicted RBP11.23□□□□□ -0.61
CLRN1-203ENST00000328863 BTNL8Q6UX41 500 aa11.23□□□□□ -0.61
CLRN1-203ENST00000328863 UXS1Q8NBZ7 420 aa11.23□□□□□ -0.61
CLRN1-203ENST00000328863 OR4X1Q8NH49 305 aa11.23□□□□□ -0.61
CLRN1-203ENST00000328863 TBC1D24Q9ULP9 559 aa11.23□□□□□ -0.61
CLRN1-203ENST00000328863 CLN5O75503 358 aa11.22□□□□□ -0.61
CLRN1-203ENST00000328863 YIF1AO95070 293 aa11.22□□□□□ -0.61
CLRN1-203ENST00000328863 BMI1P35226 326 aa11.22□□□□□ -0.61
CLRN1-203ENST00000328863 DEFB114Q30KQ6 69 aa11.22□□□□□ -0.61
CLRN1-203ENST00000328863 TM4SF20Q53R12 229 aa11.22□□□□□ -0.61
CLRN1-203ENST00000328863 ADAMTSL5Q6ZMM2 481 aa11.22□□□□□ -0.61
CLRN1-203ENST00000328863 ZNF600Q6ZNG1 722 aa11.22□□□□□ -0.61
CLRN1-203ENST00000328863 MITD1Q8WV92 249 aa11.22□□□□□ -0.61
CLRN1-203ENST00000328863 FNDC4Q9H6D8 234 aaPredicted RBP11.22□□□□□ -0.61
CLRN1-203ENST00000328863 TRAV30A0A087WSZ9 112 aa11.21□□□□□ -0.61
CLRN1-203ENST00000328863 K7EMT4 169 aa11.21□□□□□ -0.61
CLRN1-203ENST00000328863 WRBO00258 174 aa11.21□□□□□ -0.61
CLRN1-203ENST00000328863 ADAP1O75689 374 aa11.21□□□□□ -0.61
CLRN1-203ENST00000328863 IFNA4P05014 189 aa11.21□□□□□ -0.61
CLRN1-203ENST00000328863 IAPPP10997 89 aa11.21□□□□□ -0.61
CLRN1-203ENST00000328863 RAB11AP62491 216 aa11.21□□□□□ -0.61
CLRN1-203ENST00000328863 RPP30P78346 268 aaKnown RBP11.21□□□□□ -0.61
CLRN1-203ENST00000328863 GUCA2BQ16661 112 aa11.21□□□□□ -0.61
CLRN1-203ENST00000328863 SLC16A13Q7RTY0 426 aa11.21□□□□□ -0.61
CLRN1-203ENST00000328863 TMEM61Q8N0U2 210 aa11.21□□□□□ -0.61
CLRN1-203ENST00000328863 MLXQ9UH92 298 aa11.21□□□□□ -0.61
CLRN1-203ENST00000328863 TRAV25A0A0B4J276 109 aa11.2□□□□□ -0.62
CLRN1-203ENST00000328863 IZUMO1RA6ND01 250 aa11.2□□□□□ -0.62
CLRN1-203ENST00000328863 SYNGR2O43760 224 aa11.2□□□□□ -0.62
CLRN1-203ENST00000328863 H2AFB2P0C5Z0 115 aa11.2□□□□□ -0.62
CLRN1-203ENST00000328863 C8orf88P0DMB2 117 aa11.2□□□□□ -0.62
CLRN1-203ENST00000328863 RND2P52198 227 aa11.2□□□□□ -0.62
CLRN1-203ENST00000328863 DEFA1P59665 94 aa11.2□□□□□ -0.62
CLRN1-203ENST00000328863 DEFA3P59666 94 aa11.2□□□□□ -0.62
CLRN1-203ENST00000328863 C11orf87Q6NUJ2 197 aa11.2□□□□□ -0.62
CLRN1-203ENST00000328863 RBPMS2Q6ZRY4 209 aaKnown RBP11.2□□□□□ -0.62
CLRN1-203ENST00000328863 OR52B4Q8NGK2 314 aa11.2□□□□□ -0.62
CLRN1-203ENST00000328863 OR1S2Q8NGQ3 325 aa11.2□□□□□ -0.62
CLRN1-203ENST00000328863 TMEM170AQ8WVE7 144 aa11.2□□□□□ -0.62
CLRN1-203ENST00000328863 OR10C1Q96KK4 312 aa11.2□□□□□ -0.62
CLRN1-203ENST00000328863 IGHV3OR16-8A0A075B7F1 116 aa11.19□□□□□ -0.62
CLRN1-203ENST00000328863 TMEM50AO95807 157 aa11.19□□□□□ -0.62
CLRN1-203ENST00000328863 NKX2-1P43699 371 aaPredicted RBP11.19□□□□□ -0.62
CLRN1-203ENST00000328863 CD81P60033 236 aa11.19□□□□□ -0.62
CLRN1-203ENST00000328863 LAMTOR1Q6IAA8 161 aa11.19□□□□□ -0.62
CLRN1-203ENST00000328863 PRSS54Q6PEW0 395 aa11.19□□□□□ -0.62
CLRN1-203ENST00000328863 TMEM116Q8NCL8 245 aa11.19□□□□□ -0.62
CLRN1-203ENST00000328863 ZNF431Q8TF32 576 aaPredicted RBP11.19□□□□□ -0.62
CLRN1-203ENST00000328863 WDR89Q96FK6 387 aaPredicted RBP11.19□□□□□ -0.62
CLRN1-203ENST00000328863 SLC35E1Q96K37 410 aa11.19□□□□□ -0.62
CLRN1-203ENST00000328863 MRPL36Q9P0J6 103 aaKnown RBP11.19□□□□□ -0.62
CLRN1-203ENST00000328863 PAIP2BQ9ULR5 123 aaKnown RBP11.19□□□□□ -0.62
CLRN1-203ENST00000328863 PUS1Q9Y606 427 aaKnown RBP eCLIP11.19□□□□□ -0.62
CLRN1-203ENST00000328863 IGHV7-4-1A0A0J9YVY3 117 aa11.18□□□□□ -0.62
CLRN1-203ENST00000328863 MPTX1A8MV57 137 aa11.18□□□□□ -0.62
CLRN1-203ENST00000328863 ZNF207O43670 478 aaKnown RBP11.18□□□□□ -0.62
CLRN1-203ENST00000328863 SCGB1D2O95969 90 aa11.18□□□□□ -0.62
CLRN1-203ENST00000328863 IGLC1P0CG04 106 aa11.18□□□□□ -0.62
CLRN1-203ENST00000328863 OR10J1P30954 320 aa11.18□□□□□ -0.62
CLRN1-203ENST00000328863 IAH1Q2TAA2 248 aaPredicted RBP11.18□□□□□ -0.62
CLRN1-203ENST00000328863 OR4D5Q8NGN0 318 aa11.18□□□□□ -0.62
CLRN1-203ENST00000328863 ACY3Q96HD9 319 aa11.18□□□□□ -0.62
CLRN1-203ENST00000328863 SPAG8Q99932 426 aaPredicted RBP11.18□□□□□ -0.62
CLRN1-203ENST00000328863 MAGT1Q9H0U3 335 aa11.18□□□□□ -0.62
CLRN1-203ENST00000328863 TMEM231Q9H6L2 316 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms