RNA–Protein interactions for RNA: ENST00000327628.9

TRAK1-201, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAK1, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-201ENST00000327628 LINC00477Q96M19 166 aa11.07□□□□□ -0.64
TRAK1-201ENST00000327628 GRIFINA4D1Z8 144 aa11.07□□□□□ -0.64
TRAK1-201ENST00000327628 PGPEP1LA6NFU8 196 aa11.07□□□□□ -0.64
TRAK1-201ENST00000327628 ST6GALNAC3Q8NDV1 305 aa11.07□□□□□ -0.64
TRAK1-201ENST00000327628 OR9G4Q8NGQ1 327 aa11.07□□□□□ -0.64
TRAK1-201ENST00000327628 PGPEP1Q9NXJ5 209 aa11.07□□□□□ -0.64
TRAK1-201ENST00000327628 TMEM155Q4W5P6 130 aa11.07□□□□□ -0.64
TRAK1-201ENST00000327628 TMEM238C9JI98 176 aa11.06□□□□□ -0.64
TRAK1-201ENST00000327628 ATP5G3P48201 142 aa11.06□□□□□ -0.64
TRAK1-201ENST00000327628 ZNF415Q09FC8 603 aa11.06□□□□□ -0.64
TRAK1-201ENST00000327628 MBNL3Q9NUK0 354 aaKnown RBP11.06□□□□□ -0.64
TRAK1-201ENST00000327628 H3BTX0 84 aa11.06□□□□□ -0.64
TRAK1-201ENST00000327628 IFITM2Q01629 132 aa11.06□□□□□ -0.64
TRAK1-201ENST00000327628 MRPL52Q86TS9 123 aaKnown RBP11.06□□□□□ -0.64
TRAK1-201ENST00000327628 SPACA3Q8IXA5 215 aa11.06□□□□□ -0.64
TRAK1-201ENST00000327628 SLC25A39Q9BZJ4 359 aaPredicted RBP11.06□□□□□ -0.64
TRAK1-201ENST00000327628 TRGV4A0A0C4DH28 118 aa11.06□□□□□ -0.64
TRAK1-201ENST00000327628 A0A0G2JMM0 328 aa11.06□□□□□ -0.64
TRAK1-201ENST00000327628 A0A1W2PPB8 328 aa11.06□□□□□ -0.64
TRAK1-201ENST00000327628 A0A1W2PRS3 328 aa11.06□□□□□ -0.64
TRAK1-201ENST00000327628 KIR3DP1A8MWS1 328 aa11.06□□□□□ -0.64
TRAK1-201ENST00000327628 S100A7L2Q5SY68 101 aa11.06□□□□□ -0.64
TRAK1-201ENST00000327628 TPTE2P1Q5T6R2 138 aa11.06□□□□□ -0.64
TRAK1-201ENST00000327628 NCOR1P1Q9H4R4 102 aa11.06□□□□□ -0.64
TRAK1-201ENST00000327628 IGKV3OR2-268A0A0C4DH90 116 aa11.06□□□□□ -0.64
TRAK1-201ENST00000327628 NIT1Q86X76 327 aa11.06□□□□□ -0.64
TRAK1-201ENST00000327628 COL11A1P12107 1806 aaPredicted RBP11.06□□□□□ -0.64
TRAK1-201ENST00000327628 IGHV3OR16-10A0A075B7F0 116 aa11.05□□□□□ -0.64
TRAK1-201ENST00000327628 ZNF815PA8K554 130 aa11.05□□□□□ -0.64
TRAK1-201ENST00000327628 SLC25A15Q9Y619 301 aa11.05□□□□□ -0.64
TRAK1-201ENST00000327628 TRAV9-2A0A087WT02 112 aa11.05□□□□□ -0.64
TRAK1-201ENST00000327628 A0A1B0GWJ7 208 aa11.05□□□□□ -0.64
TRAK1-201ENST00000327628 SSC4DQ8WTU2 575 aa11.05□□□□□ -0.64
TRAK1-201ENST00000327628 ARID2Q68CP9 1835 aa11.05□□□□□ -0.64
TRAK1-201ENST00000327628 LYZL4Q96KX0 146 aa11.05□□□□□ -0.64
TRAK1-201ENST00000327628 PATJQ8NI35 1801 aa11.05□□□□□ -0.64
TRAK1-201ENST00000327628 ANKRD36A6QL64 1941 aa11.05□□□□□ -0.64
TRAK1-201ENST00000327628 A0A1B0GWB2 263 aa11.05□□□□□ -0.64
TRAK1-201ENST00000327628 IGKV3-20P01619 116 aa11.05□□□□□ -0.64
TRAK1-201ENST00000327628 SNRPCP09234 159 aaKnown RBP11.05□□□□□ -0.64
TRAK1-201ENST00000327628 CHTOPQ9Y3Y2 248 aaKnown RBP11.05□□□□□ -0.64
TRAK1-201ENST00000327628 SPCS1Q9Y6A9 102 aa11.05□□□□□ -0.64
TRAK1-201ENST00000327628 IGHV2-26A0A0B4J1V2 119 aa11.04□□□□□ -0.64
TRAK1-201ENST00000327628 MBD3L4A6NDZ8 208 aaPredicted RBP11.04□□□□□ -0.64
TRAK1-201ENST00000327628 MBD3L3A6NE82 208 aaPredicted RBP11.04□□□□□ -0.64
TRAK1-201ENST00000327628 MBD3L5A6NJ08 208 aaPredicted RBP11.04□□□□□ -0.64
TRAK1-201ENST00000327628 CD59P13987 128 aa11.04□□□□□ -0.64
TRAK1-201ENST00000327628 MBD3L2Q8NHZ7 208 aaPredicted RBP11.04□□□□□ -0.64
TRAK1-201ENST00000327628 RNF114Q9Y508 228 aa11.04□□□□□ -0.64
TRAK1-201ENST00000327628 LINC00614P0C842 121 aa11.04□□□□□ -0.64
TRAK1-201ENST00000327628 SPRR3Q9UBC9 169 aa11.04□□□□□ -0.64
TRAK1-201ENST00000327628 ADARB2-AS1A8MUL3 147 aa11.04□□□□□ -0.64
TRAK1-201ENST00000327628 PROB1E7EW31 1015 aa11.04□□□□□ -0.64
TRAK1-201ENST00000327628 FOXA3P55318 350 aaPredicted RBP11.04□□□□□ -0.64
TRAK1-201ENST00000327628 PRR32B1ATL7 298 aa11.04□□□□□ -0.64
TRAK1-201ENST00000327628 IGKCP01834 107 aa11.04□□□□□ -0.64
TRAK1-201ENST00000327628 HSD52Q0P140 79 aa11.04□□□□□ -0.64
TRAK1-201ENST00000327628 HAPLN4Q86UW8 402 aa11.04□□□□□ -0.64
TRAK1-201ENST00000327628 TIMM23O14925 209 aa11.03□□□□□ -0.64
TRAK1-201ENST00000327628 CD28P10747 220 aa11.03□□□□□ -0.64
TRAK1-201ENST00000327628 EFNB3Q15768 340 aa11.03□□□□□ -0.64
TRAK1-201ENST00000327628 RASL10AQ92737 203 aa11.03□□□□□ -0.64
TRAK1-201ENST00000327628 GPHA2Q96T91 129 aa11.03□□□□□ -0.64
TRAK1-201ENST00000327628 AGMATQ9BSE5 352 aa11.03□□□□□ -0.64
TRAK1-201ENST00000327628 IGHG3P01860 377 aa11.03□□□□□ -0.64
TRAK1-201ENST00000327628 IGHV1-8P0DP01 117 aa11.03□□□□□ -0.64
TRAK1-201ENST00000327628 FOXL1Q12952 345 aa11.03□□□□□ -0.64
TRAK1-201ENST00000327628 IGHV3-23P01764 117 aa11.03□□□□□ -0.64
TRAK1-201ENST00000327628 ATXN8Q156A1 80 aa11.03□□□□□ -0.64
TRAK1-201ENST00000327628 ZNF672Q499Z4 452 aaPredicted RBP11.03□□□□□ -0.64
TRAK1-201ENST00000327628 SEPSECSQ9HD40 501 aaKnown RBP11.03□□□□□ -0.64
TRAK1-201ENST00000327628 TRBV24-1A0A075B6N3 115 aa11.03□□□□□ -0.64
TRAK1-201ENST00000327628 TMEM178BH3BS89 294 aa11.03□□□□□ -0.64
TRAK1-201ENST00000327628 CCL3L1P16619 93 aa11.03□□□□□ -0.64
TRAK1-201ENST00000327628 RPL36AP83881 106 aaKnown RBP11.03□□□□□ -0.64
TRAK1-201ENST00000327628 FOXL2NBQ6ZUU3 175 aa11.03□□□□□ -0.64
TRAK1-201ENST00000327628 RPL36ALQ969Q0 106 aaKnown RBP11.03□□□□□ -0.64
TRAK1-201ENST00000327628 BEX4Q9NWD9 120 aaPredicted RBP11.03□□□□□ -0.64
TRAK1-201ENST00000327628 SLC17A3O00476 420 aa11.02□□□□□ -0.64
TRAK1-201ENST00000327628 LHFPL1Q86WI0 220 aa11.02□□□□□ -0.64
TRAK1-201ENST00000327628 RNF126Q9BV68 326 aa11.02□□□□□ -0.64
TRAK1-201ENST00000327628 SPANXDQ9BXN6 97 aa11.02□□□□□ -0.64
TRAK1-201ENST00000327628 NRN1Q9NPD7 142 aa11.02□□□□□ -0.64
TRAK1-201ENST00000327628 F5P12259 2224 aa11.02□□□□□ -0.64
TRAK1-201ENST00000327628 DOCK5Q9H7D0 1870 aa11.02□□□□□ -0.64
TRAK1-201ENST00000327628 CELA3BP08861 270 aa11.02□□□□□ -0.65
TRAK1-201ENST00000327628 CTAG1AP78358 180 aa11.02□□□□□ -0.65
TRAK1-201ENST00000327628 LAGE3Q14657 143 aa11.02□□□□□ -0.65
TRAK1-201ENST00000327628 SSBP4Q9BWG4 385 aaPredicted RBP11.02□□□□□ -0.65
TRAK1-201ENST00000327628 IGKV1-9A0A0C4DH69 117 aa11.02□□□□□ -0.65
TRAK1-201ENST00000327628 OR10W1Q8NGF6 305 aa11.02□□□□□ -0.65
TRAK1-201ENST00000327628 C18orf15Q96N68 181 aa11.02□□□□□ -0.65
TRAK1-201ENST00000327628 RFNGQ9Y644 331 aa11.02□□□□□ -0.65
TRAK1-201ENST00000327628 RP1L1Q8IWN7 2480 aaPredicted RBP11.02□□□□□ -0.65
TRAK1-201ENST00000327628 SHISA3A0PJX4 238 aa11.02□□□□□ -0.65
TRAK1-201ENST00000327628 C1QL4Q86Z23 238 aa11.02□□□□□ -0.65
TRAK1-201ENST00000327628 SPANXA1Q9NS26 97 aa11.02□□□□□ -0.65
TRAK1-201ENST00000327628 CLDN16Q9Y5I7 305 aa11.02□□□□□ -0.65
TRAK1-201ENST00000327628 PSME4Q14997 1843 aa11.02□□□□□ -0.65
TRAK1-201ENST00000327628 ZFC3H1O60293 1989 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms