RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 NUP35Q8NFH5 326 aa11.9□□□□□ -0.5
SSBP3-201ENST00000326956 NUDT10Q8NFP7 164 aa11.9□□□□□ -0.5
SSBP3-201ENST00000326956 OR2T6Q8NHC8 308 aa11.9□□□□□ -0.5
SSBP3-201ENST00000326956 CACNG8Q8WXS5 425 aa11.9□□□□□ -0.5
SSBP3-201ENST00000326956 SNRNP40Q96DI7 357 aaKnown RBP11.9□□□□□ -0.5
SSBP3-201ENST00000326956 NUDT11Q96G61 164 aa11.9□□□□□ -0.5
SSBP3-201ENST00000326956 TRAV9-2A0A087WT02 112 aa11.9□□□□□ -0.5
SSBP3-201ENST00000326956 FAM181BA6NEQ2 426 aa11.9□□□□□ -0.5
SSBP3-201ENST00000326956 PEX7O00628 323 aa11.9□□□□□ -0.5
SSBP3-201ENST00000326956 PYYP10082 97 aa11.9□□□□□ -0.5
SSBP3-201ENST00000326956 GPR6P46095 362 aaPredicted RBP11.9□□□□□ -0.5
SSBP3-201ENST00000326956 RPL8P62917 257 aaKnown RBP11.9□□□□□ -0.5
SSBP3-201ENST00000326956 GUSBP1Q15486 140 aa11.9□□□□□ -0.5
SSBP3-201ENST00000326956 SPRNQ5BIV9 151 aa11.9□□□□□ -0.5
SSBP3-201ENST00000326956 WIPF2Q8TF74 440 aaPredicted RBP11.9□□□□□ -0.5
SSBP3-201ENST00000326956 SLC25A2Q9BXI2 301 aa11.9□□□□□ -0.5
SSBP3-201ENST00000326956 RNF7Q9UBF6 113 aa11.9□□□□□ -0.5
SSBP3-201ENST00000326956 MRPS16Q9Y3D3 137 aaKnown RBP11.9□□□□□ -0.5
SSBP3-201ENST00000326956 DMDP11532 3685 aa11.9□□□□□ -0.51
SSBP3-201ENST00000326956 SRRM4A7MD48 611 aaKnown RBP11.9□□□□□ -0.51
SSBP3-201ENST00000326956 CT45A6P0DMU7 189 aa11.9□□□□□ -0.51
SSBP3-201ENST00000326956 CT45A5P0DMU8 189 aa11.9□□□□□ -0.51
SSBP3-201ENST00000326956 CT45A7P0DMV0 189 aa11.9□□□□□ -0.51
SSBP3-201ENST00000326956 RBMXL3Q8N7X1 1067 aaKnown RBP11.9□□□□□ -0.51
SSBP3-201ENST00000326956 SSBP4Q9BWG4 385 aaPredicted RBP11.9□□□□□ -0.51
SSBP3-201ENST00000326956 NCOR1P1Q9H4R4 102 aa11.9□□□□□ -0.51
SSBP3-201ENST00000326956 NDUFB8O95169 186 aa11.89□□□□□ -0.51
SSBP3-201ENST00000326956 MORN5Q5VZ52 161 aa11.89□□□□□ -0.51
SSBP3-201ENST00000326956 FAM231DQ6ZW35 169 aa11.89□□□□□ -0.51
SSBP3-201ENST00000326956 HARBI1Q96MB7 349 aa11.89□□□□□ -0.51
SSBP3-201ENST00000326956 PLSCR4Q9NRQ2 329 aa11.89□□□□□ -0.51
SSBP3-201ENST00000326956 HIGD1CA8MV81 97 aa11.89□□□□□ -0.51
SSBP3-201ENST00000326956 LEMD1Q68G75 181 aa11.89□□□□□ -0.51
SSBP3-201ENST00000326956 UNQ5815/PRO19632Q6UWF5 114 aa11.89□□□□□ -0.51
SSBP3-201ENST00000326956 FAM167A-AS1Q96KT0 104 aa11.89□□□□□ -0.51
SSBP3-201ENST00000326956 CCL13Q99616 98 aa11.89□□□□□ -0.51
SSBP3-201ENST00000326956 ZNF71Q9NQZ8 489 aaPredicted RBP11.89□□□□□ -0.51
SSBP3-201ENST00000326956 RPH3ALQ9UNE2 315 aa11.89□□□□□ -0.51
SSBP3-201ENST00000326956 MSMPQ1L6U9 139 aa11.88□□□□□ -0.51
SSBP3-201ENST00000326956 FAM162BQ5T6X4 162 aa11.88□□□□□ -0.51
SSBP3-201ENST00000326956 HES3Q5TGS1 186 aa11.88□□□□□ -0.51
SSBP3-201ENST00000326956 DUX4L9Q6RFH8 374 aaPredicted RBP11.88□□□□□ -0.51
SSBP3-201ENST00000326956 OR2D3Q8NGH3 330 aa11.88□□□□□ -0.51
SSBP3-201ENST00000326956 PRO3102Q9H379 93 aa11.88□□□□□ -0.51
SSBP3-201ENST00000326956 TNFRSF19Q9NS68 423 aa11.88□□□□□ -0.51
SSBP3-201ENST00000326956 COL27A1Q8IZC6 1860 aaPredicted RBP11.88□□□□□ -0.51
SSBP3-201ENST00000326956 ZNF714Q96N38 554 aa11.88□□□□□ -0.51
SSBP3-201ENST00000326956 ASCL3Q9NQ33 180 aa11.88□□□□□ -0.51
SSBP3-201ENST00000326956 LHBP01229 141 aa11.87□□□□□ -0.51
SSBP3-201ENST00000326956 SLC25A5P05141 298 aaKnown RBP11.87□□□□□ -0.51
SSBP3-201ENST00000326956 SUB1P53999 127 aaKnown RBP eCLIP11.87□□□□□ -0.51
SSBP3-201ENST00000326956 ZNF430Q9H8G1 570 aaPredicted RBP11.87□□□□□ -0.51
SSBP3-201ENST00000326956 SLC25A15Q9Y619 301 aa11.87□□□□□ -0.51
SSBP3-201ENST00000326956 DSCAMO60469 2012 aa11.87□□□□□ -0.51
SSBP3-201ENST00000326956 TNFAIP6P98066 277 aaPredicted RBP11.87□□□□□ -0.51
SSBP3-201ENST00000326956 EBLN2Q6P2I7 272 aa11.87□□□□□ -0.51
SSBP3-201ENST00000326956 SLC25A48Q6ZT89 311 aaKnown RBP11.87□□□□□ -0.51
SSBP3-201ENST00000326956 ZNF329Q86UD4 541 aa11.87□□□□□ -0.51
SSBP3-201ENST00000326956 OSR1Q8TAX0 266 aaPredicted RBP11.87□□□□□ -0.51
SSBP3-201ENST00000326956 NPIPB3Q92617 1050 aa11.87□□□□□ -0.51
SSBP3-201ENST00000326956 ALKBH7Q9BT30 221 aaPredicted RBP11.87□□□□□ -0.51
SSBP3-201ENST00000326956 ZNRD1Q9P1U0 126 aa11.87□□□□□ -0.51
SSBP3-201ENST00000326956 RPUSD1Q9UJJ7 312 aaKnown RBP11.87□□□□□ -0.51
SSBP3-201ENST00000326956 IGHV2-26A0A0B4J1V2 119 aa11.87□□□□□ -0.51
SSBP3-201ENST00000326956 A0A1W2PN81 502 aa11.87□□□□□ -0.51
SSBP3-201ENST00000326956 PDPNQ86YL7 162 aa11.87□□□□□ -0.51
SSBP3-201ENST00000326956 OR8B2Q96RD0 313 aa11.87□□□□□ -0.51
SSBP3-201ENST00000326956 TMEM70Q9BUB7 260 aa11.87□□□□□ -0.51
SSBP3-201ENST00000326956 COX11Q9Y6N1 276 aa11.87□□□□□ -0.51
SSBP3-201ENST00000326956 hADV38S2A0JD32 116 aa11.86□□□□□ -0.51
SSBP3-201ENST00000326956 CCL25O15444 150 aa11.86□□□□□ -0.51
SSBP3-201ENST00000326956 PLAUP00749 431 aa11.86□□□□□ -0.51
SSBP3-201ENST00000326956 IGHV3-48P01763 117 aa11.86□□□□□ -0.51
SSBP3-201ENST00000326956 GLRXP35754 106 aa11.86□□□□□ -0.51
SSBP3-201ENST00000326956 KLF5Q13887 457 aaPredicted RBP11.86□□□□□ -0.51
SSBP3-201ENST00000326956 FAM216BQ8N7L0 139 aa11.86□□□□□ -0.51
SSBP3-201ENST00000326956 OR8B3Q8NGG8 313 aa11.86□□□□□ -0.51
SSBP3-201ENST00000326956 BLNKQ8WV28 456 aa11.86□□□□□ -0.51
SSBP3-201ENST00000326956 MBD6Q96DN6 1003 aa11.86□□□□□ -0.51
SSBP3-201ENST00000326956 SSUH2Q9Y2M2 353 aa11.86□□□□□ -0.51
SSBP3-201ENST00000326956 CACNA1GO43497 2377 aa11.86□□□□□ -0.51
SSBP3-201ENST00000326956 IGLL1P15814 213 aa11.86□□□□□ -0.51
SSBP3-201ENST00000326956 TNFSF4P23510 183 aa11.86□□□□□ -0.51
SSBP3-201ENST00000326956 GNG5P63218 68 aa11.86□□□□□ -0.51
SSBP3-201ENST00000326956 TMEM30BQ3MIR4 351 aa11.86□□□□□ -0.51
SSBP3-201ENST00000326956 GDF5OSQ5U4N7 250 aa11.86□□□□□ -0.51
SSBP3-201ENST00000326956 ZNF596Q8TC21 504 aa11.86□□□□□ -0.51
SSBP3-201ENST00000326956 SGK494Q96LW2 274 aa11.86□□□□□ -0.51
SSBP3-201ENST00000326956 TM4SF5O14894 197 aa11.85□□□□□ -0.51
SSBP3-201ENST00000326956 CD59P13987 128 aa11.85□□□□□ -0.51
SSBP3-201ENST00000326956 UBE2V1Q13404 147 aa11.85□□□□□ -0.51
SSBP3-201ENST00000326956 ATP5L2Q7Z4Y8 100 aa11.85□□□□□ -0.51
SSBP3-201ENST00000326956 FLYWCH2Q96CP2 140 aaKnown RBP11.85□□□□□ -0.51
SSBP3-201ENST00000326956 MRPL20Q9BYC9 149 aaKnown RBP11.85□□□□□ -0.51
SSBP3-201ENST00000326956 CLEC5AQ9NY25 188 aa11.85□□□□□ -0.51
SSBP3-201ENST00000326956 COL6A3P12111 3177 aa11.85□□□□□ -0.51
SSBP3-201ENST00000326956 TRAV17A0A0B4J275 112 aa11.85□□□□□ -0.51
SSBP3-201ENST00000326956 Q6ZVH6 145 aa11.85□□□□□ -0.51
SSBP3-201ENST00000326956 FAM169BQ8N8A8 192 aa11.85□□□□□ -0.51
SSBP3-201ENST00000326956 FDCSPQ8NFU4 85 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms