RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 JPT1Q9UK76 154 aa8.28□□□□□ -1.08
COL12A1-201ENST00000322507 FAM90A1Q86YD7 464 aa8.28□□□□□ -1.08
COL12A1-201ENST00000322507 IFITM2Q01629 132 aa8.28□□□□□ -1.08
COL12A1-201ENST00000322507 OR5P3Q8WZ94 311 aa8.28□□□□□ -1.08
COL12A1-201ENST00000322507 TMEM131Q92545 1883 aa8.28□□□□□ -1.08
COL12A1-201ENST00000322507 SRSF1Q07955 248 aaKnown RBP eCLIP8.28□□□□□ -1.08
COL12A1-201ENST00000322507 C1orf195Q5TG92 126 aa8.28□□□□□ -1.08
COL12A1-201ENST00000322507 BCL6BQ8N143 479 aaPredicted RBP8.28□□□□□ -1.08
COL12A1-201ENST00000322507 TPRX1Q8N7U7 411 aa8.28□□□□□ -1.08
COL12A1-201ENST00000322507 FRMPD3Q5JV73 1810 aa8.28□□□□□ -1.08
COL12A1-201ENST00000322507 A0A1W2PPI3 338 aa8.28□□□□□ -1.08
COL12A1-201ENST00000322507 CD5P06127 495 aa8.27□□□□□ -1.08
COL12A1-201ENST00000322507 KCNK17Q96T54 332 aa8.27□□□□□ -1.08
COL12A1-201ENST00000322507 C20orf144Q9BQM9 153 aa8.27□□□□□ -1.08
COL12A1-201ENST00000322507 MPV17P39210 176 aa8.27□□□□□ -1.09
COL12A1-201ENST00000322507 OR51G1Q8NGK1 321 aa8.27□□□□□ -1.09
COL12A1-201ENST00000322507 PTH2Q96A98 100 aa8.27□□□□□ -1.09
COL12A1-201ENST00000322507 RPP21Q9H633 154 aaKnown RBP8.27□□□□□ -1.09
COL12A1-201ENST00000322507 PIGYQ3MUY2 71 aa8.27□□□□□ -1.09
COL12A1-201ENST00000322507 COQ2Q96H96 371 aa8.27□□□□□ -1.09
COL12A1-201ENST00000322507 IGHV3-43A0A0B4J1X8 118 aa8.27□□□□□ -1.09
COL12A1-201ENST00000322507 IGHV3-43DP0DP04 118 aa8.27□□□□□ -1.09
COL12A1-201ENST00000322507 CX3CL1P78423 397 aa8.27□□□□□ -1.09
COL12A1-201ENST00000322507 FOXC1Q12948 553 aa8.27□□□□□ -1.09
COL12A1-201ENST00000322507 CIARTQ8N365 385 aaPredicted RBP8.27□□□□□ -1.09
COL12A1-201ENST00000322507 A0A0G2JMZ2 1700 aa8.27□□□□□ -1.09
COL12A1-201ENST00000322507 LRRC37A2A6NM11 1700 aa8.27□□□□□ -1.09
COL12A1-201ENST00000322507 ZFP36L2P47974 494 aaKnown RBP8.27□□□□□ -1.09
COL12A1-201ENST00000322507 IL11P20809 199 aa8.27□□□□□ -1.09
COL12A1-201ENST00000322507 PRSS41Q7RTY9 318 aa8.27□□□□□ -1.09
COL12A1-201ENST00000322507 UCP2P55851 309 aa8.27□□□□□ -1.09
COL12A1-201ENST00000322507 HEPN1Q6WQI6 88 aa8.27□□□□□ -1.09
COL12A1-201ENST00000322507 MMP23AO75900 390 aa8.27□□□□□ -1.09
COL12A1-201ENST00000322507 INSL4Q14641 139 aa8.27□□□□□ -1.09
COL12A1-201ENST00000322507 CDCP2Q5VXM1 449 aa8.27□□□□□ -1.09
COL12A1-201ENST00000322507 TAF15Q92804 592 aaKnown RBP eCLIP8.27□□□□□ -1.09
COL12A1-201ENST00000322507 KLK15Q9H2R5 256 aa8.27□□□□□ -1.09
COL12A1-201ENST00000322507 CD8AP01732 235 aa8.26□□□□□ -1.09
COL12A1-201ENST00000322507 VKORC1Q9BQB6 163 aa8.26□□□□□ -1.09
COL12A1-201ENST00000322507 PRSS27Q9BQR3 290 aa8.26□□□□□ -1.09
COL12A1-201ENST00000322507 PLA2G10O15496 165 aa8.26□□□□□ -1.09
COL12A1-201ENST00000322507 DDB2Q92466 427 aa8.26□□□□□ -1.09
COL12A1-201ENST00000322507 GPX1P07203 203 aa8.26□□□□□ -1.09
COL12A1-201ENST00000322507 WISP3O95389 354 aaPredicted RBP8.26□□□□□ -1.09
COL12A1-201ENST00000322507 IFI27P40305 119 aaPredicted RBP8.26□□□□□ -1.09
COL12A1-201ENST00000322507 FZR1Q9UM11 496 aa8.26□□□□□ -1.09
COL12A1-201ENST00000322507 SNAI2O43623 268 aa8.26□□□□□ -1.09
COL12A1-201ENST00000322507 SEMA5BQ9P283 1151 aa8.26□□□□□ -1.09
COL12A1-201ENST00000322507 A0A1W2PPV9 198 aa8.26□□□□□ -1.09
COL12A1-201ENST00000322507 C8orf88P0DMB2 117 aa8.26□□□□□ -1.09
COL12A1-201ENST00000322507 ECSCRQ19T08 205 aa8.26□□□□□ -1.09
COL12A1-201ENST00000322507 APCDD1LQ8NCL9 501 aa8.26□□□□□ -1.09
COL12A1-201ENST00000322507 BAALCQ8WXS3 180 aa8.26□□□□□ -1.09
COL12A1-201ENST00000322507 C1orf162Q8NEQ5 155 aaPredicted RBP8.26□□□□□ -1.09
COL12A1-201ENST00000322507 C9JAW5 83 aa8.25□□□□□ -1.09
COL12A1-201ENST00000322507 IGHG2P01859 326 aa8.25□□□□□ -1.09
COL12A1-201ENST00000322507 C1QAP02745 245 aa8.25□□□□□ -1.09
COL12A1-201ENST00000322507 ZNF79Q15937 498 aa8.25□□□□□ -1.09
COL12A1-201ENST00000322507 C18orf15Q96N68 181 aa8.25□□□□□ -1.09
COL12A1-201ENST00000322507 SHISA8B8ZZ34 492 aa8.25□□□□□ -1.09
COL12A1-201ENST00000322507 Q6ZS52 159 aa8.25□□□□□ -1.09
COL12A1-201ENST00000322507 ADAD2Q8NCV1 583 aaKnown RBP8.25□□□□□ -1.09
COL12A1-201ENST00000322507 KLK13Q9UKR3 277 aa8.25□□□□□ -1.09
COL12A1-201ENST00000322507 YBX2Q9Y2T7 364 aaKnown RBP8.25□□□□□ -1.09
COL12A1-201ENST00000322507 MUC21A0A0G2JKD1 596 aa8.25□□□□□ -1.09
COL12A1-201ENST00000322507 MUC21A0A140T8X8 626 aa8.25□□□□□ -1.09
COL12A1-201ENST00000322507 MUC21Q5SSG8 566 aa8.25□□□□□ -1.09
COL12A1-201ENST00000322507 ABHD12Q8N2K0 398 aa8.25□□□□□ -1.09
COL12A1-201ENST00000322507 TTTY12Q9BZ98 90 aa8.25□□□□□ -1.09
COL12A1-201ENST00000322507 TEX38Q6PEX7 206 aa8.25□□□□□ -1.09
COL12A1-201ENST00000322507 SRSF12Q8WXF0 261 aaKnown RBP8.25□□□□□ -1.09
COL12A1-201ENST00000322507 FAM60AQ9NP50 221 aa8.25□□□□□ -1.09
COL12A1-201ENST00000322507 hCG_38984A0A1B0GV85 526 aa8.25□□□□□ -1.09
COL12A1-201ENST00000322507 AMBPP02760 352 aa8.25□□□□□ -1.09
COL12A1-201ENST00000322507 RUNX1Q01196 453 aa8.25□□□□□ -1.09
COL12A1-201ENST00000322507 H3BQ85 93 aa8.25□□□□□ -1.09
COL12A1-201ENST00000322507 GZMMP51124 257 aa8.25□□□□□ -1.09
COL12A1-201ENST00000322507 TMEM92Q6UXU6 159 aa8.25□□□□□ -1.09
COL12A1-201ENST00000322507 OR11H4Q8NGC9 324 aa8.25□□□□□ -1.09
COL12A1-201ENST00000322507 RCC1LQ96I51 464 aaKnown RBP8.25□□□□□ -1.09
COL12A1-201ENST00000322507 PLXNB3Q9ULL4 1909 aa8.25□□□□□ -1.09
COL12A1-201ENST00000322507 LYPD6BQ8NI32 183 aa8.25□□□□□ -1.09
COL12A1-201ENST00000322507 TNFRSF19Q9NS68 423 aa8.25□□□□□ -1.09
COL12A1-201ENST00000322507 PLXNA3P51805 1871 aa8.24□□□□□ -1.09
COL12A1-201ENST00000322507 ZNF784Q8NCA9 323 aaPredicted RBP8.24□□□□□ -1.09
COL12A1-201ENST00000322507 PEX7O00628 323 aa8.24□□□□□ -1.09
COL12A1-201ENST00000322507 TMEM91Q6ZNR0 172 aa8.24□□□□□ -1.09
COL12A1-201ENST00000322507 PAX1P15863 534 aa8.24□□□□□ -1.09
COL12A1-201ENST00000322507 DAD1P61803 113 aa8.24□□□□□ -1.09
COL12A1-201ENST00000322507 C2orf68Q2NKX9 166 aa8.24□□□□□ -1.09
COL12A1-201ENST00000322507 K7ERS5 55 aa8.24□□□□□ -1.09
COL12A1-201ENST00000322507 LOXL3P58215 753 aa8.24□□□□□ -1.09
COL12A1-201ENST00000322507 SFTA2Q6UW10 78 aa8.24□□□□□ -1.09
COL12A1-201ENST00000322507 CLDND2Q8NHS1 167 aa8.24□□□□□ -1.09
COL12A1-201ENST00000322507 FGF11Q92914 225 aa8.24□□□□□ -1.09
COL12A1-201ENST00000322507 PRSS53Q2L4Q9 553 aa8.24□□□□□ -1.09
COL12A1-201ENST00000322507 GLRXP35754 106 aa8.24□□□□□ -1.09
COL12A1-201ENST00000322507 SPINK9Q5DT21 86 aa8.24□□□□□ -1.09
COL12A1-201ENST00000322507 FAM89BQ8N5H3 189 aa8.24□□□□□ -1.09
COL12A1-201ENST00000322507 IGHV1-45A0A0A0MS14 117 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms