RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 OCC1Q8TAD7 63 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 CLUHP3Q96NS8 147 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 MS4A5Q9H3V2 200 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 CDX4O14627 284 aaPredicted RBP5.95□□□□□ -1.46
SMC1A-201ENST00000322213 EGR1P18146 543 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 SLC25A48Q6ZT89 311 aaKnown RBP5.95□□□□□ -1.46
SMC1A-201ENST00000322213 Q6ZWC4 215 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 SGK494Q96LW2 274 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 SMPXQ9UHP9 88 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 TCF19Q9Y242 345 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 SPRY3O43610 288 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 GUSBP1Q15486 140 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 BMPERQ8N8U9 685 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 KIR2DL4Q99706 377 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 FOXC2Q99958 501 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 NXT2Q9NPJ8 142 aaKnown RBP5.95□□□□□ -1.46
SMC1A-201ENST00000322213 PLSCR4Q9NRQ2 329 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 DLL3Q9NYJ7 618 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 C9JQL5 133 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 ATXN7O15265 892 aaPredicted RBP5.95□□□□□ -1.46
SMC1A-201ENST00000322213 FAM53AQ6NSI3 398 aaPredicted RBP5.95□□□□□ -1.46
SMC1A-201ENST00000322213 GOLT1AQ6ZVE7 132 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 TRAV8-1A0A0A6YYK1 113 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 PAQR4Q8N4S7 273 aaPredicted RBP5.95□□□□□ -1.46
SMC1A-201ENST00000322213 TMEM171Q8WVE6 324 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 PCNTO95613 3336 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 ANOS1P23352 680 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 LGALS7P47929 136 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 COQ2Q96H96 371 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 SPANXCQ9NY87 97 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 K7EP34 96 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 NDUFA3O95167 84 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 FAM90A2PQ658T7 463 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 CRIM1Q9NZV1 1036 aa5.95□□□□□ -1.46
SMC1A-201ENST00000322213 IGHV2-26A0A0B4J1V2 119 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.94□□□□□ -1.46
SMC1A-201ENST00000322213 IGKCP01834 107 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 IGHV4-34P06331 123 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 SMIM10L1P0DMW3 83 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 IGLC2P0DOY2 106 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 IGLC3P0DOY3 106 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 HSPE1P61604 102 aaKnown RBP5.94□□□□□ -1.46
SMC1A-201ENST00000322213 TPRX1Q8N7U7 411 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 OR4A5Q8NH83 315 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 FGF11Q92914 225 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 VOPP1Q96AW1 172 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 SMIM10Q96HG1 83 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 PRR32B1ATL7 298 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 SPINT1O43278 529 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 SSTR5P35346 364 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 TMPRSS3P57727 454 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 PSG4Q00888 419 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 CACNG8Q8WXS5 425 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 BEX4Q9NWD9 120 aaPredicted RBP5.94□□□□□ -1.46
SMC1A-201ENST00000322213 LAMTOR5O43504 91 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 C3orf79P0CE67 100 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 FAM166AQ6J272 317 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 OR5AN1Q8NGI8 311 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 LHX2P50458 406 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 TNFAIP6P98066 277 aaPredicted RBP5.94□□□□□ -1.46
SMC1A-201ENST00000322213 EFNB3Q15768 340 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 TMEM78Q5T7P6 136 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 SIGLEC12Q96PQ1 595 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 YAE1D1Q9NRH1 226 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 EP400Q96L91 3159 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 CEACAM3P40198 252 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 HES3Q5TGS1 186 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 DEFB108BQ8NET1 73 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 TRBV20OR9-2A0A075B6H5 130 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 ID3Q02535 119 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 C16orf47Q6ZP98 133 aaPredicted RBP5.94□□□□□ -1.46
SMC1A-201ENST00000322213 GCSAMQ8N6F7 178 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 SYT8Q8NBV8 401 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 LINC00470Q9BZP3 86 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 KLF12Q9Y4X4 402 aa5.94□□□□□ -1.46
SMC1A-201ENST00000322213 SRSF6Q13247 344 aaKnown RBP5.94□□□□□ -1.46
SMC1A-201ENST00000322213 ZNF296Q8WUU4 475 aaPredicted RBP5.94□□□□□ -1.46
SMC1A-201ENST00000322213 hDV102S1A0JD36 115 aa5.93□□□□□ -1.46
SMC1A-201ENST00000322213 CXCL12P48061 93 aa5.93□□□□□ -1.46
SMC1A-201ENST00000322213 SP7Q8TDD2 431 aaPredicted RBP5.93□□□□□ -1.46
SMC1A-201ENST00000322213 TMEM54Q969K7 222 aa5.93□□□□□ -1.46
SMC1A-201ENST00000322213 PGPA6NDG6 321 aa5.93□□□□□ -1.46
SMC1A-201ENST00000322213 ZNF83P51522 516 aa5.93□□□□□ -1.46
SMC1A-201ENST00000322213 SPXQ9BT56 116 aa5.93□□□□□ -1.46
SMC1A-201ENST00000322213 SYNGR3O43761 229 aa5.93□□□□□ -1.46
SMC1A-201ENST00000322213 CD55P08174 381 aa5.93□□□□□ -1.46
SMC1A-201ENST00000322213 QRFPP83859 136 aa5.93□□□□□ -1.46
SMC1A-201ENST00000322213 POU2AF1Q16633 256 aa5.93□□□□□ -1.46
SMC1A-201ENST00000322213 NMSQ5H8A3 153 aa5.93□□□□□ -1.46
SMC1A-201ENST00000322213 LCN12Q6JVE5 192 aa5.93□□□□□ -1.46
SMC1A-201ENST00000322213 PCSK4Q6UW60 755 aa5.93□□□□□ -1.46
SMC1A-201ENST00000322213 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.93□□□□□ -1.46
SMC1A-201ENST00000322213 METTL26Q96S19 204 aa5.93□□□□□ -1.46
SMC1A-201ENST00000322213 WIPI1Q5MNZ9 446 aaPredicted RBP5.93□□□□□ -1.46
SMC1A-201ENST00000322213 NUP35Q8NFH5 326 aa5.93□□□□□ -1.46
SMC1A-201ENST00000322213 TIMP4Q99727 224 aa5.93□□□□□ -1.46
SMC1A-201ENST00000322213 RAB1BQ9H0U4 201 aa5.93□□□□□ -1.46
SMC1A-201ENST00000322213 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.93□□□□□ -1.46
SMC1A-201ENST00000322213 CACNG7P62955 275 aa5.93□□□□□ -1.46
SMC1A-201ENST00000322213 TCTEX1D4Q5JR98 221 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms