RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 TIMM23O14925 209 aa6.07□□□□□ -1.44
IFT88-201ENST00000319980 CLN5O75503 358 aa6.07□□□□□ -1.44
IFT88-201ENST00000319980 AREGP15514 252 aa6.07□□□□□ -1.44
IFT88-201ENST00000319980 CD24P25063 80 aa6.07□□□□□ -1.44
IFT88-201ENST00000319980 GPR6P46095 362 aaPredicted RBP6.07□□□□□ -1.44
IFT88-201ENST00000319980 KLRD1Q13241 179 aa6.07□□□□□ -1.44
IFT88-201ENST00000319980 PLGLAQ15195 96 aa6.07□□□□□ -1.44
IFT88-201ENST00000319980 NECAP1Q8NC96 275 aa6.07□□□□□ -1.44
IFT88-201ENST00000319980 TMEM37Q8WXS4 190 aa6.07□□□□□ -1.44
IFT88-201ENST00000319980 MISP3Q96FF7 219 aa6.07□□□□□ -1.44
IFT88-201ENST00000319980 FUT9Q9Y231 359 aa6.07□□□□□ -1.44
IFT88-201ENST00000319980 PRELID1Q9Y255 219 aa6.07□□□□□ -1.44
IFT88-201ENST00000319980 CSMD1Q96PZ7 3565 aa6.07□□□□□ -1.44
IFT88-201ENST00000319980 SCO2A0A1W2PP80 73 aa6.07□□□□□ -1.44
IFT88-201ENST00000319980 FCN1O00602 326 aa6.07□□□□□ -1.44
IFT88-201ENST00000319980 OR7C2O60412 319 aa6.07□□□□□ -1.44
IFT88-201ENST00000319980 CRYGBP07316 175 aa6.07□□□□□ -1.44
IFT88-201ENST00000319980 RND2P52198 227 aa6.07□□□□□ -1.44
IFT88-201ENST00000319980 ZNF90Q03938 601 aa6.07□□□□□ -1.44
IFT88-201ENST00000319980 C16orf82Q7Z2V1 217 aa6.07□□□□□ -1.44
IFT88-201ENST00000319980 LHFPL4Q7Z7J7 247 aa6.07□□□□□ -1.44
IFT88-201ENST00000319980 FAM210BQ96KR6 192 aa6.07□□□□□ -1.44
IFT88-201ENST00000319980 CTDSP1Q9GZU7 261 aa6.07□□□□□ -1.44
IFT88-201ENST00000319980 MRPL36Q9P0J6 103 aaKnown RBP6.07□□□□□ -1.44
IFT88-201ENST00000319980 DOK5Q9P104 306 aa6.07□□□□□ -1.44
IFT88-201ENST00000319980 DPM3Q9P2X0 92 aa6.07□□□□□ -1.44
IFT88-201ENST00000319980 IGHV3-21A0A0B4J1V1 117 aa6.06□□□□□ -1.44
IFT88-201ENST00000319980 F6UZH7 168 aa6.06□□□□□ -1.44
IFT88-201ENST00000319980 OR10J4P0C629 311 aa6.06□□□□□ -1.44
IFT88-201ENST00000319980 COMPP49747 757 aaPredicted RBP6.06□□□□□ -1.44
IFT88-201ENST00000319980 MMDQ15546 238 aa6.06□□□□□ -1.44
IFT88-201ENST00000319980 TPTE2P1Q5T6R2 138 aa6.06□□□□□ -1.44
IFT88-201ENST00000319980 TXNDC17Q9BRA2 123 aa6.06□□□□□ -1.44
IFT88-201ENST00000319980 C5orf52A6NGY3 159 aa6.06□□□□□ -1.44
IFT88-201ENST00000319980 H7BYZ3 331 aa6.06□□□□□ -1.44
IFT88-201ENST00000319980 NDUFS6O75380 124 aaKnown RBP6.06□□□□□ -1.44
IFT88-201ENST00000319980 VENTXO95231 258 aa6.06□□□□□ -1.44
IFT88-201ENST00000319980 LGALS4P56470 323 aa6.06□□□□□ -1.44
IFT88-201ENST00000319980 CLEC12BQ2HXU8 276 aa6.06□□□□□ -1.44
IFT88-201ENST00000319980 RUSC1-AS1Q66K80 236 aa6.06□□□□□ -1.44
IFT88-201ENST00000319980 LINC01551Q86U37 167 aa6.06□□□□□ -1.44
IFT88-201ENST00000319980 C1QL4Q86Z23 238 aa6.06□□□□□ -1.44
IFT88-201ENST00000319980 MRPL41Q8IXM3 137 aaKnown RBP6.06□□□□□ -1.44
IFT88-201ENST00000319980 OR11H6Q8NGC7 330 aa6.06□□□□□ -1.44
IFT88-201ENST00000319980 SLC25A33Q9BSK2 321 aa6.06□□□□□ -1.44
IFT88-201ENST00000319980 TECRQ9NZ01 308 aaKnown RBP6.06□□□□□ -1.44
IFT88-201ENST00000319980 CFAP46Q8IYW2 2715 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 TRBV20OR9-2A0A075B6H5 130 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 M0R1W7 72 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 TRGC2P03986 189 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 PRTN3P24158 256 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 ZFP36P26651 326 aaKnown RBP6.05□□□□□ -1.44
IFT88-201ENST00000319980 MFAP2P55001 183 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 FABP9Q0Z7S8 132 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 SSX2Q16385 188 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 MORN5Q5VZ52 161 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 ZNF503Q96F45 646 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 UHRF2Q96PU4 802 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 C19orf24Q9BVV8 132 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 DNAJC4Q9NNZ3 241 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 IGKV1D-37A0A075B6S9 117 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 TRAV5A0A0B4J249 113 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 CNIH1O95406 144 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 OR5G3P0C626 314 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 CEACAM3P40198 252 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 TAS2R45P59539 299 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 HES1Q14469 280 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 PQLC2Q6ZP29 291 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 ZNF114Q8NC26 417 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 SRSF12Q8WXF0 261 aaKnown RBP6.05□□□□□ -1.44
IFT88-201ENST00000319980 OR5B12Q96R08 314 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 ELOVL1Q9BW60 279 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 KLF2Q9Y5W3 355 aaPredicted RBP6.05□□□□□ -1.44
IFT88-201ENST00000319980 WNK2Q9Y3S1 2297 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 TCRBV4S1A1TA0A5B7 111 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 A6NNC1 897 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 MOSP00540 346 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 C8orf88P0DMB2 117 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 HNF1AP20823 631 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 GALR1P47211 349 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 EFNA4P52798 201 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 LCN2P80188 198 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 ETFRF1Q6IPR1 90 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 OR1P1Q8NH06 330 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 OR4X1Q8NH49 305 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 TMEM167BQ9NRX6 74 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 TNFRSF19Q9NS68 423 aa6.05□□□□□ -1.44
IFT88-201ENST00000319980 TRBV24-1A0A075B6N3 115 aa6.04□□□□□ -1.44
IFT88-201ENST00000319980 PSMB11A5LHX3 300 aa6.04□□□□□ -1.44
IFT88-201ENST00000319980 TEX22C9J3V5 150 aa6.04□□□□□ -1.44
IFT88-201ENST00000319980 COX7A2P2O60397 106 aa6.04□□□□□ -1.44
IFT88-201ENST00000319980 PFN1P07737 140 aaKnown RBP6.04□□□□□ -1.44
IFT88-201ENST00000319980 S100PP25815 95 aa6.04□□□□□ -1.44
IFT88-201ENST00000319980 VMO1Q7Z5L0 202 aa6.04□□□□□ -1.44
IFT88-201ENST00000319980 LINC00518Q8N0U6 118 aa6.04□□□□□ -1.44
IFT88-201ENST00000319980 RNF5Q99942 180 aa6.04□□□□□ -1.44
IFT88-201ENST00000319980 A0A1W2PPQ1 181 aa6.04□□□□□ -1.44
IFT88-201ENST00000319980 AP4M1O00189 453 aa6.04□□□□□ -1.44
IFT88-201ENST00000319980 IGHV2-5P01817 119 aa6.04□□□□□ -1.44
IFT88-201ENST00000319980 SNRPCP09234 159 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms