RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 SLC25A17O43808 307 aa7.74□□□□□ -1.17
CAPN3-201ENST00000318023 PLAUP00749 431 aa7.74□□□□□ -1.17
CAPN3-201ENST00000318023 SCTP09683 121 aa7.74□□□□□ -1.17
CAPN3-201ENST00000318023 USF1P22415 310 aaPredicted RBP7.74□□□□□ -1.17
CAPN3-201ENST00000318023 GATA3P23771 443 aa7.74□□□□□ -1.17
CAPN3-201ENST00000318023 LINC00173Q6ZV60 143 aa7.74□□□□□ -1.17
CAPN3-201ENST00000318023 AAED1Q7RTV5 226 aa7.74□□□□□ -1.17
CAPN3-201ENST00000318023 ZNF837Q96EG3 531 aaPredicted RBP7.74□□□□□ -1.17
CAPN3-201ENST00000318023 IL36GQ9NZH8 169 aa7.74□□□□□ -1.17
CAPN3-201ENST00000318023 OTOGQ6ZRI0 2925 aa7.74□□□□□ -1.17
CAPN3-201ENST00000318023 C2orf70A6NJV1 201 aa7.74□□□□□ -1.17
CAPN3-201ENST00000318023 LIPT2A6NK58 231 aa7.74□□□□□ -1.17
CAPN3-201ENST00000318023 K7EP34 96 aa7.74□□□□□ -1.17
CAPN3-201ENST00000318023 COX5AP20674 150 aa7.74□□□□□ -1.17
CAPN3-201ENST00000318023 OR8B3Q8NGG8 313 aa7.74□□□□□ -1.17
CAPN3-201ENST00000318023 C18orf32Q8TCD1 76 aa7.74□□□□□ -1.17
CAPN3-201ENST00000318023 GEMIN7Q9H840 131 aaKnown RBP7.74□□□□□ -1.17
CAPN3-201ENST00000318023 MOB1AQ9H8S9 216 aa7.74□□□□□ -1.17
CAPN3-201ENST00000318023 UBTD1Q9HAC8 227 aa7.74□□□□□ -1.17
CAPN3-201ENST00000318023 CD300LBA8K4G0 201 aa7.73□□□□□ -1.17
CAPN3-201ENST00000318023 OR7C1O76099 320 aaPredicted RBP7.73□□□□□ -1.17
CAPN3-201ENST00000318023 LINC00869P0C866 280 aa7.73□□□□□ -1.17
CAPN3-201ENST00000318023 PATE4P0C8F1 98 aa7.73□□□□□ -1.17
CAPN3-201ENST00000318023 ZNF16P17020 682 aaPredicted RBP7.73□□□□□ -1.17
CAPN3-201ENST00000318023 OR2K2Q8NGT1 345 aa7.73□□□□□ -1.17
CAPN3-201ENST00000318023 HS3ST6Q96QI5 342 aa7.73□□□□□ -1.17
CAPN3-201ENST00000318023 ULBP2Q9BZM5 246 aa7.73□□□□□ -1.17
CAPN3-201ENST00000318023 COMMD5Q9GZQ3 224 aa7.73□□□□□ -1.17
CAPN3-201ENST00000318023 RNASE7Q9H1E1 156 aaKnown RBP7.73□□□□□ -1.17
CAPN3-201ENST00000318023 IGKV1-27A0A075B6S5 117 aa7.73□□□□□ -1.17
CAPN3-201ENST00000318023 A0A1W2PPR1 153 aa7.73□□□□□ -1.17
CAPN3-201ENST00000318023 IGHMP01871 453 aa7.73□□□□□ -1.17
CAPN3-201ENST00000318023 OR10J4P0C629 311 aa7.73□□□□□ -1.17
CAPN3-201ENST00000318023 TCTAP57738 103 aa7.73□□□□□ -1.17
CAPN3-201ENST00000318023 ST20Q9HBF5 79 aa7.73□□□□□ -1.17
CAPN3-201ENST00000318023 ATP23Q9Y6H3 246 aa7.73□□□□□ -1.17
CAPN3-201ENST00000318023 GAGE12HA6NDE8 117 aa7.73□□□□□ -1.17
CAPN3-201ENST00000318023 REG1AP05451 166 aa7.73□□□□□ -1.17
CAPN3-201ENST00000318023 SLC25A6P12236 298 aa7.73□□□□□ -1.17
CAPN3-201ENST00000318023 OR10AG1Q8NH19 301 aa7.73□□□□□ -1.17
CAPN3-201ENST00000318023 C19orf24Q9BVV8 132 aa7.73□□□□□ -1.17
CAPN3-201ENST00000318023 TECRQ9NZ01 308 aaKnown RBP7.73□□□□□ -1.17
CAPN3-201ENST00000318023 TIMM8BQ9Y5J9 83 aaPredicted RBP7.73□□□□□ -1.17
CAPN3-201ENST00000318023 PGLYRP1O75594 196 aaPredicted RBP7.72□□□□□ -1.17
CAPN3-201ENST00000318023 CA1P00915 261 aaPredicted RBP7.72□□□□□ -1.17
CAPN3-201ENST00000318023 HTR1DP28221 377 aa7.72□□□□□ -1.17
CAPN3-201ENST00000318023 CD1BP29016 333 aa7.72□□□□□ -1.17
CAPN3-201ENST00000318023 GPR183P32249 361 aa7.72□□□□□ -1.17
CAPN3-201ENST00000318023 BHLHA15Q7RTS1 189 aaPredicted RBP7.72□□□□□ -1.17
CAPN3-201ENST00000318023 MRPL21Q7Z2W9 205 aaKnown RBP7.72□□□□□ -1.17
CAPN3-201ENST00000318023 SPSB1Q96BD6 273 aa7.72□□□□□ -1.17
CAPN3-201ENST00000318023 TMEM70Q9BUB7 260 aa7.72□□□□□ -1.17
CAPN3-201ENST00000318023 KCNIP2Q9NS61 270 aa7.72□□□□□ -1.17
CAPN3-201ENST00000318023 JKAMPQ9P055 326 aa7.72□□□□□ -1.17
CAPN3-201ENST00000318023 V9GYV3 84 aa7.72□□□□□ -1.17
CAPN3-201ENST00000318023 IGKV1-12A0A0C4DH73 117 aa7.72□□□□□ -1.17
CAPN3-201ENST00000318023 ZNF716A6NP11 495 aa7.72□□□□□ -1.17
CAPN3-201ENST00000318023 F2RL2O00254 374 aa7.72□□□□□ -1.17
CAPN3-201ENST00000318023 RHBDL1O75783 438 aa7.72□□□□□ -1.17
CAPN3-201ENST00000318023 IGKV1D-12P01611 117 aa7.72□□□□□ -1.17
CAPN3-201ENST00000318023 APCSP02743 223 aa7.72□□□□□ -1.17
CAPN3-201ENST00000318023 ADH4P08319 380 aa7.72□□□□□ -1.17
CAPN3-201ENST00000318023 CCL1P22362 96 aa7.72□□□□□ -1.17
CAPN3-201ENST00000318023 EDDM3BP56851 147 aa7.72□□□□□ -1.17
CAPN3-201ENST00000318023 RPL31P62899 125 aaKnown RBP7.72□□□□□ -1.17
CAPN3-201ENST00000318023 RPL8P62917 257 aaKnown RBP7.72□□□□□ -1.17
CAPN3-201ENST00000318023 RNPS1Q15287 305 aaKnown RBP7.72□□□□□ -1.17
CAPN3-201ENST00000318023 PSG3Q16557 428 aa7.72□□□□□ -1.17
CAPN3-201ENST00000318023 SLC25A53Q5H9E4 307 aa7.72□□□□□ -1.17
CAPN3-201ENST00000318023 SCCPDHQ8NBX0 429 aa7.72□□□□□ -1.17
CAPN3-201ENST00000318023 NEU4Q8WWR8 484 aaPredicted RBP7.72□□□□□ -1.17
CAPN3-201ENST00000318023 ZNF479Q96JC4 524 aa7.72□□□□□ -1.17
CAPN3-201ENST00000318023 NPCDR1Q9BY65 106 aa7.72□□□□□ -1.17
CAPN3-201ENST00000318023 HES4Q9HCC6 221 aa7.72□□□□□ -1.17
CAPN3-201ENST00000318023 PNRC2Q9NPJ4 139 aaKnown RBP7.72□□□□□ -1.17
CAPN3-201ENST00000318023 SPCS1Q9Y6A9 102 aa7.72□□□□□ -1.17
CAPN3-201ENST00000318023 TRBV9A0A0B4J1U6 114 aa7.71□□□□□ -1.17
CAPN3-201ENST00000318023 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.71□□□□□ -1.17
CAPN3-201ENST00000318023 H0Y980 276 aa7.71□□□□□ -1.17
CAPN3-201ENST00000318023 DHRS3O75911 302 aa7.71□□□□□ -1.17
CAPN3-201ENST00000318023 CGAP01215 116 aa7.71□□□□□ -1.17
CAPN3-201ENST00000318023 ARL14EPLP0DKL9 152 aa7.71□□□□□ -1.17
CAPN3-201ENST00000318023 IGHV1-2P23083 117 aa7.71□□□□□ -1.17
CAPN3-201ENST00000318023 F2RP25116 425 aa7.71□□□□□ -1.17
CAPN3-201ENST00000318023 HIST1H1AQ02539 215 aaPredicted RBP7.71□□□□□ -1.17
CAPN3-201ENST00000318023 SPATA31B1PQ5VZV4 182 aa7.71□□□□□ -1.17
CAPN3-201ENST00000318023 TMEM45BQ96B21 275 aa7.71□□□□□ -1.17
CAPN3-201ENST00000318023 PLPPR2Q96GM1 343 aa7.71□□□□□ -1.17
CAPN3-201ENST00000318023 NIPBLQ6KC79 2804 aaeCLIP7.71□□□□□ -1.17
CAPN3-201ENST00000318023 A0A0G2JLM5 398 aa7.71□□□□□ -1.18
CAPN3-201ENST00000318023 SS18L1O75177 396 aaPredicted RBP7.71□□□□□ -1.18
CAPN3-201ENST00000318023 PDCD6O75340 191 aa7.71□□□□□ -1.18
CAPN3-201ENST00000318023 IGKV1-39P01597 117 aa7.71□□□□□ -1.18
CAPN3-201ENST00000318023 IGKV1D-39P04432 117 aa7.71□□□□□ -1.18
CAPN3-201ENST00000318023 CLRN1P58418 232 aa7.71□□□□□ -1.18
CAPN3-201ENST00000318023 RAB31Q13636 194 aa7.71□□□□□ -1.18
CAPN3-201ENST00000318023 SPINK9Q5DT21 86 aa7.71□□□□□ -1.18
CAPN3-201ENST00000318023 C1orf122Q6ZSJ8 110 aa7.71□□□□□ -1.18
CAPN3-201ENST00000318023 PDZD2O15018 2839 aa7.71□□□□□ -1.18
CAPN3-201ENST00000318023 C9orf118A6NHY6 69 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms