RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 GTSCR1Q86UQ5 136 aa10.23□□□□□ -0.77
EBF1-201ENST00000313708 UBE2ZQ9H832 354 aaPredicted RBP10.23□□□□□ -0.77
EBF1-201ENST00000313708 A0A1W2PRD5 423 aa10.23□□□□□ -0.77
EBF1-201ENST00000313708 A0A1W2PRF3 423 aa10.23□□□□□ -0.77
EBF1-201ENST00000313708 A0A1W2PRM7 423 aa10.23□□□□□ -0.77
EBF1-201ENST00000313708 TRBV20OR9-2A0A075B6H5 130 aa10.23□□□□□ -0.77
EBF1-201ENST00000313708 IGHV3-21A0A0B4J1V1 117 aa10.23□□□□□ -0.77
EBF1-201ENST00000313708 WFDC2Q14508 124 aa10.23□□□□□ -0.77
EBF1-201ENST00000313708 NDFIP1Q9BT67 221 aa10.23□□□□□ -0.77
EBF1-201ENST00000313708 TMEM189A5PLL7 270 aa10.22□□□□□ -0.77
EBF1-201ENST00000313708 A8MWV9 139 aa10.22□□□□□ -0.77
EBF1-201ENST00000313708 OR11H12B2RN74 326 aa10.22□□□□□ -0.77
EBF1-201ENST00000313708 SP9P0CG40 484 aa10.22□□□□□ -0.77
EBF1-201ENST00000313708 FOLR3P41439 243 aa10.22□□□□□ -0.77
EBF1-201ENST00000313708 CCDC144NLQ6NUI1 221 aa10.22□□□□□ -0.77
EBF1-201ENST00000313708 DEFB108BQ8NET1 73 aa10.22□□□□□ -0.77
EBF1-201ENST00000313708 OR11H1Q8NG94 326 aa10.22□□□□□ -0.77
EBF1-201ENST00000313708 OR11H2Q8NH07 326 aa10.22□□□□□ -0.77
EBF1-201ENST00000313708 FAM222BQ8WU58 562 aa10.22□□□□□ -0.77
EBF1-201ENST00000313708 TRAV24A0A0B4J272 114 aa10.22□□□□□ -0.77
EBF1-201ENST00000313708 A0A0J9YW62 118 aa10.22□□□□□ -0.77
EBF1-201ENST00000313708 COL9A1P20849 921 aa10.22□□□□□ -0.77
EBF1-201ENST00000313708 INO80CQ6PI98 192 aaPredicted RBP10.22□□□□□ -0.77
EBF1-201ENST00000313708 SPATA12Q7Z6I5 190 aa10.22□□□□□ -0.77
EBF1-201ENST00000313708 GPR82Q96P67 336 aa10.22□□□□□ -0.77
EBF1-201ENST00000313708 F5P12259 2224 aa10.22□□□□□ -0.77
EBF1-201ENST00000313708 DIDO1Q9BTC0 2240 aaKnown RBP10.22□□□□□ -0.77
EBF1-201ENST00000313708 SHANK1Q9Y566 2161 aa10.22□□□□□ -0.77
EBF1-201ENST00000313708 KIAA1671Q9BY89 1806 aa10.22□□□□□ -0.77
EBF1-201ENST00000313708 C15orf62A8K5M9 175 aa10.22□□□□□ -0.77
EBF1-201ENST00000313708 TSPAN13O95857 204 aa10.22□□□□□ -0.77
EBF1-201ENST00000313708 ODF3L1Q8IXM7 274 aa10.22□□□□□ -0.77
EBF1-201ENST00000313708 LILRA5A6NI73 299 aa10.22□□□□□ -0.77
EBF1-201ENST00000313708 RPL30P62888 115 aaKnown RBP10.22□□□□□ -0.77
EBF1-201ENST00000313708 GOLT1AQ6ZVE7 132 aa10.22□□□□□ -0.77
EBF1-201ENST00000313708 C12orf77C9JDV5 145 aa10.21□□□□□ -0.77
EBF1-201ENST00000313708 EFEMP2O95967 443 aa10.21□□□□□ -0.77
EBF1-201ENST00000313708 ORM1P02763 201 aa10.21□□□□□ -0.77
EBF1-201ENST00000313708 PPP1R32Q7Z5V6 425 aa10.21□□□□□ -0.77
EBF1-201ENST00000313708 COL4A3Q01955 1670 aa10.21□□□□□ -0.77
EBF1-201ENST00000313708 ALKBH6Q3KRA9 238 aa10.21□□□□□ -0.77
EBF1-201ENST00000313708 OBP2AQ9NY56 170 aa10.21□□□□□ -0.77
EBF1-201ENST00000313708 C20orf204Q6ZNR8 217 aa10.21□□□□□ -0.78
EBF1-201ENST00000313708 FER1L6-AS2Q96M78 137 aa10.21□□□□□ -0.78
EBF1-201ENST00000313708 BRWD1Q9NSI6 2320 aa10.21□□□□□ -0.78
EBF1-201ENST00000313708 NDUFA3O95167 84 aa10.21□□□□□ -0.78
EBF1-201ENST00000313708 VEGFBP49765 207 aa10.21□□□□□ -0.78
EBF1-201ENST00000313708 LINC00305Q7Z4B0 112 aa10.21□□□□□ -0.78
EBF1-201ENST00000313708 CNEP1R1Q8N9A8 125 aa10.21□□□□□ -0.78
EBF1-201ENST00000313708 RNF183Q96D59 192 aa10.21□□□□□ -0.78
EBF1-201ENST00000313708 ZNF256Q9Y2P7 627 aaPredicted RBP10.21□□□□□ -0.78
EBF1-201ENST00000313708 C10orf126Q8N4M7 172 aa10.2□□□□□ -0.78
EBF1-201ENST00000313708 TMEM178AQ8NBL3 297 aa10.2□□□□□ -0.78
EBF1-201ENST00000313708 OR5AN1Q8NGI8 311 aa10.2□□□□□ -0.78
EBF1-201ENST00000313708 DLX4Q92988 240 aaPredicted RBP10.2□□□□□ -0.78
EBF1-201ENST00000313708 CFHR5Q9BXR6 569 aa10.2□□□□□ -0.78
EBF1-201ENST00000313708 BEX4Q9NWD9 120 aaPredicted RBP10.2□□□□□ -0.78
EBF1-201ENST00000313708 MED12Q93074 2177 aa10.2□□□□□ -0.78
EBF1-201ENST00000313708 LRRK1Q38SD2 2015 aa10.2□□□□□ -0.78
EBF1-201ENST00000313708 APELAP0DMC3 54 aa10.2□□□□□ -0.78
EBF1-201ENST00000313708 TFF2Q03403 129 aa10.2□□□□□ -0.78
EBF1-201ENST00000313708 RPP25Q9BUL9 199 aaKnown RBP10.2□□□□□ -0.78
EBF1-201ENST00000313708 TRBV20-1A0A075B6N2 111 aa10.2□□□□□ -0.78
EBF1-201ENST00000313708 TRAV8-1A0A0A6YYK1 113 aa10.2□□□□□ -0.78
EBF1-201ENST00000313708 RPL39P5Q59GN2 51 aa10.2□□□□□ -0.78
EBF1-201ENST00000313708 TCTEX1D4Q5JR98 221 aa10.2□□□□□ -0.78
EBF1-201ENST00000313708 MBNL2Q5VZF2 373 aaKnown RBP10.2□□□□□ -0.78
EBF1-201ENST00000313708 ORMDL3Q8N138 153 aa10.2□□□□□ -0.78
EBF1-201ENST00000313708 OR10X1Q8NGY0 326 aa10.2□□□□□ -0.78
EBF1-201ENST00000313708 FSCN3Q9NQT6 498 aa10.2□□□□□ -0.78
EBF1-201ENST00000313708 IGKCP01834 107 aa10.2□□□□□ -0.78
EBF1-201ENST00000313708 CLPSP04118 112 aa10.2□□□□□ -0.78
EBF1-201ENST00000313708 LEPP41159 167 aa10.2□□□□□ -0.78
EBF1-201ENST00000313708 C1orf122Q6ZSJ8 110 aa10.2□□□□□ -0.78
EBF1-201ENST00000313708 FAM168AQ92567 244 aa10.2□□□□□ -0.78
EBF1-201ENST00000313708 GTF3C1Q12789 2109 aa10.19□□□□□ -0.78
EBF1-201ENST00000313708 VWA8A3KMH1 1905 aa10.19□□□□□ -0.78
EBF1-201ENST00000313708 C8orf86Q6ZUL3 223 aa10.19□□□□□ -0.78
EBF1-201ENST00000313708 LRRC29Q8WV35 223 aa10.19□□□□□ -0.78
EBF1-201ENST00000313708 COQ2Q96H96 371 aa10.19□□□□□ -0.78
EBF1-201ENST00000313708 KLK15Q9H2R5 256 aa10.19□□□□□ -0.78
EBF1-201ENST00000313708 IDI2-AS1Q9NZ38 188 aa10.19□□□□□ -0.78
EBF1-201ENST00000313708 TICRRQ7Z2Z1 1910 aa10.19□□□□□ -0.78
EBF1-201ENST00000313708 GAGE12JA6NER3 117 aa10.19□□□□□ -0.78
EBF1-201ENST00000313708 GAGE7O76087 117 aa10.19□□□□□ -0.78
EBF1-201ENST00000313708 CXCL10P02778 98 aa10.19□□□□□ -0.78
EBF1-201ENST00000313708 GAGE12FP0CL80 117 aa10.19□□□□□ -0.78
EBF1-201ENST00000313708 GAGE12GP0CL81 117 aa10.19□□□□□ -0.78
EBF1-201ENST00000313708 GAGE12IP0CL82 117 aa10.19□□□□□ -0.78
EBF1-201ENST00000313708 HERVK_113P61574 105 aa10.19□□□□□ -0.78
EBF1-201ENST00000313708 GAGE4Q13068 117 aa10.19□□□□□ -0.78
EBF1-201ENST00000313708 TMEM92Q6UXU6 159 aa10.19□□□□□ -0.78
EBF1-201ENST00000313708 PRDM14Q9GZV8 571 aa10.19□□□□□ -0.78
EBF1-201ENST00000313708 CCL3P10147 92 aa10.19□□□□□ -0.78
EBF1-201ENST00000313708 CD40P25942 277 aa10.19□□□□□ -0.78
EBF1-201ENST00000313708 LINC00310P59036 64 aa10.19□□□□□ -0.78
EBF1-201ENST00000313708 RPRMLQ8N4K4 120 aa10.19□□□□□ -0.78
EBF1-201ENST00000313708 TCF20Q9UGU0 1960 aaKnown RBP10.19□□□□□ -0.78
EBF1-201ENST00000313708 HOXA4Q00056 320 aaPredicted RBP10.19□□□□□ -0.78
EBF1-201ENST00000313708 KLF5Q13887 457 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms