RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 NEGR1Q7Z3B1 354 aa7.4□□□□□ -1.23
COL6A5-202ENST00000312481 GPX1P07203 203 aa7.39□□□□□ -1.23
COL6A5-202ENST00000312481 FTH1P19P0C7X4 201 aa7.39□□□□□ -1.23
COL6A5-202ENST00000312481 LMO1P25800 156 aa7.39□□□□□ -1.23
COL6A5-202ENST00000312481 PRSS12P56730 875 aa7.39□□□□□ -1.23
COL6A5-202ENST00000312481 ZDHHC16Q969W1 377 aa7.39□□□□□ -1.23
COL6A5-202ENST00000312481 RAXQ9Y2V3 346 aa7.39□□□□□ -1.23
COL6A5-202ENST00000312481 F5H697 171 aa7.39□□□□□ -1.23
COL6A5-202ENST00000312481 LINC01551Q86U37 167 aa7.39□□□□□ -1.23
COL6A5-202ENST00000312481 MBNL3Q9NUK0 354 aaKnown RBP7.39□□□□□ -1.23
COL6A5-202ENST00000312481 C1QL1O75973 258 aa7.39□□□□□ -1.23
COL6A5-202ENST00000312481 CD69Q07108 199 aa7.39□□□□□ -1.23
COL6A5-202ENST00000312481 TAL2Q16559 108 aa7.39□□□□□ -1.23
COL6A5-202ENST00000312481 MRPL16Q9NX20 251 aaKnown RBP7.39□□□□□ -1.23
COL6A5-202ENST00000312481 C3orf80F5H4A9 247 aa7.39□□□□□ -1.23
COL6A5-202ENST00000312481 ZNF585BQ52M93 769 aa7.39□□□□□ -1.23
COL6A5-202ENST00000312481 MORN3Q6PF18 240 aaPredicted RBP7.39□□□□□ -1.23
COL6A5-202ENST00000312481 MESP1Q9BRJ9 268 aa7.39□□□□□ -1.23
COL6A5-202ENST00000312481 GLRX5Q86SX6 157 aa7.39□□□□□ -1.23
COL6A5-202ENST00000312481 WBP1Q96G27 269 aa7.39□□□□□ -1.23
COL6A5-202ENST00000312481 TIMP4Q99727 224 aa7.39□□□□□ -1.23
COL6A5-202ENST00000312481 PGPA6NDG6 321 aa7.39□□□□□ -1.23
COL6A5-202ENST00000312481 SLC25A45Q8N413 288 aa7.39□□□□□ -1.23
COL6A5-202ENST00000312481 PAQR4Q8N4S7 273 aaPredicted RBP7.39□□□□□ -1.23
COL6A5-202ENST00000312481 NUDT10Q8NFP7 164 aa7.39□□□□□ -1.23
COL6A5-202ENST00000312481 ARRDC1-AS1Q9H2J1 176 aa7.38□□□□□ -1.23
COL6A5-202ENST00000312481 PGPEP1LA6NFU8 196 aa7.38□□□□□ -1.23
COL6A5-202ENST00000312481 C12orf77C9JDV5 145 aa7.38□□□□□ -1.23
COL6A5-202ENST00000312481 M0R1W7 72 aa7.38□□□□□ -1.23
COL6A5-202ENST00000312481 OVOL1O14753 267 aa7.38□□□□□ -1.23
COL6A5-202ENST00000312481 TMEM50AO95807 157 aa7.38□□□□□ -1.23
COL6A5-202ENST00000312481 MOSP00540 346 aa7.38□□□□□ -1.23
COL6A5-202ENST00000312481 CBLN1P23435 193 aa7.38□□□□□ -1.23
COL6A5-202ENST00000312481 DEFB108BQ8NET1 73 aa7.38□□□□□ -1.23
COL6A5-202ENST00000312481 C4orf51C9J302 202 aa7.38□□□□□ -1.23
COL6A5-202ENST00000312481 CRYBB3P26998 211 aa7.38□□□□□ -1.23
COL6A5-202ENST00000312481 SRSF6Q13247 344 aaKnown RBP7.38□□□□□ -1.23
COL6A5-202ENST00000312481 EFNB3Q15768 340 aa7.38□□□□□ -1.23
COL6A5-202ENST00000312481 MORN2Q502X0 79 aa7.38□□□□□ -1.23
COL6A5-202ENST00000312481 CYTL1Q9NRR1 136 aa7.38□□□□□ -1.23
COL6A5-202ENST00000312481 TET2Q6N021 2002 aaPredicted RBP7.38□□□□□ -1.23
COL6A5-202ENST00000312481 DUSP14O95147 198 aaKnown RBP7.38□□□□□ -1.23
COL6A5-202ENST00000312481 GNG10P50151 68 aa7.38□□□□□ -1.23
COL6A5-202ENST00000312481 DSCR9P59020 149 aa7.38□□□□□ -1.23
COL6A5-202ENST00000312481 EPDR1Q9UM22 224 aa7.38□□□□□ -1.23
COL6A5-202ENST00000312481 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.38□□□□□ -1.23
COL6A5-202ENST00000312481 LHX2P50458 406 aa7.38□□□□□ -1.23
COL6A5-202ENST00000312481 TMEM75Q8N9X5 138 aa7.38□□□□□ -1.23
COL6A5-202ENST00000312481 CYSLTR1Q9Y271 337 aa7.38□□□□□ -1.23
COL6A5-202ENST00000312481 LENEPQ9Y5L5 61 aa7.38□□□□□ -1.23
COL6A5-202ENST00000312481 HIVEP2P31629 2446 aa7.38□□□□□ -1.23
COL6A5-202ENST00000312481 A0A1W2PP11 408 aa7.38□□□□□ -1.23
COL6A5-202ENST00000312481 CLEC2AQ6UVW9 174 aa7.38□□□□□ -1.23
COL6A5-202ENST00000312481 NUP37Q8NFH4 326 aa7.38□□□□□ -1.23
COL6A5-202ENST00000312481 HDHD3Q9BSH5 251 aaPredicted RBP7.38□□□□□ -1.23
COL6A5-202ENST00000312481 GEMIN7Q9H840 131 aaKnown RBP7.38□□□□□ -1.23
COL6A5-202ENST00000312481 NDUFS8O00217 210 aa7.37□□□□□ -1.23
COL6A5-202ENST00000312481 PRSS53Q2L4Q9 553 aa7.37□□□□□ -1.23
COL6A5-202ENST00000312481 A8MWP6 167 aa7.37□□□□□ -1.23
COL6A5-202ENST00000312481 ATP5G2Q06055 141 aa7.37□□□□□ -1.23
COL6A5-202ENST00000312481 UBE2V1Q13404 147 aa7.37□□□□□ -1.23
COL6A5-202ENST00000312481 IL17RELQ6ZVW7 336 aa7.37□□□□□ -1.23
COL6A5-202ENST00000312481 PLSCR4Q9NRQ2 329 aa7.37□□□□□ -1.23
COL6A5-202ENST00000312481 CD5LO43866 347 aa7.37□□□□□ -1.23
COL6A5-202ENST00000312481 EDN3P14138 238 aa7.37□□□□□ -1.23
COL6A5-202ENST00000312481 PPP1R32Q7Z5V6 425 aa7.37□□□□□ -1.23
COL6A5-202ENST00000312481 C11orf52Q96A22 123 aa7.37□□□□□ -1.23
COL6A5-202ENST00000312481 DEFB108AA8MXU0 73 aa7.37□□□□□ -1.23
COL6A5-202ENST00000312481 OR2J3O76001 311 aa7.37□□□□□ -1.23
COL6A5-202ENST00000312481 PDLIM4P50479 330 aa7.37□□□□□ -1.23
COL6A5-202ENST00000312481 FER1L6-AS1Q8NA97 138 aa7.37□□□□□ -1.23
COL6A5-202ENST00000312481 TMEM171Q8WVE6 324 aa7.37□□□□□ -1.23
COL6A5-202ENST00000312481 SIGMAR1Q99720 223 aa7.37□□□□□ -1.23
COL6A5-202ENST00000312481 SLX1AQ9BQ83 275 aa7.37□□□□□ -1.23
COL6A5-202ENST00000312481 PIMREGQ9BSJ6 248 aa7.37□□□□□ -1.23
COL6A5-202ENST00000312481 TMEM14CQ9P0S9 112 aa7.37□□□□□ -1.23
COL6A5-202ENST00000312481 TRBV7-1A0A0A6YYK4 115 aa7.37□□□□□ -1.23
COL6A5-202ENST00000312481 PROB1E7EW31 1015 aa7.37□□□□□ -1.23
COL6A5-202ENST00000312481 Q6ZS52 159 aa7.37□□□□□ -1.23
COL6A5-202ENST00000312481 FAM159AQ6UWV7 190 aa7.37□□□□□ -1.23
COL6A5-202ENST00000312481 TRAV34A0A0B4J273 112 aa7.37□□□□□ -1.23
COL6A5-202ENST00000312481 IGHV2-5P01817 119 aa7.37□□□□□ -1.23
COL6A5-202ENST00000312481 TMEM208Q9BTX3 173 aa7.37□□□□□ -1.23
COL6A5-202ENST00000312481 SSBP4Q9BWG4 385 aaPredicted RBP7.37□□□□□ -1.23
COL6A5-202ENST00000312481 A0A1W2PRS3 328 aa7.37□□□□□ -1.23
COL6A5-202ENST00000312481 SSTR5P35346 364 aa7.37□□□□□ -1.23
COL6A5-202ENST00000312481 USMG5Q96IX5 58 aa7.37□□□□□ -1.23
COL6A5-202ENST00000312481 CHAC1Q9BUX1 264 aa7.37□□□□□ -1.23
COL6A5-202ENST00000312481 KLK10O43240 276 aa7.36□□□□□ -1.23
COL6A5-202ENST00000312481 C19orf54Q5BKX5 351 aa7.36□□□□□ -1.23
COL6A5-202ENST00000312481 RAX2Q96IS3 184 aa7.36□□□□□ -1.23
COL6A5-202ENST00000312481 LEPP41159 167 aa7.36□□□□□ -1.23
COL6A5-202ENST00000312481 CTAG1AP78358 180 aa7.36□□□□□ -1.23
COL6A5-202ENST00000312481 C21orf62Q9NYP8 219 aa7.36□□□□□ -1.23
COL6A5-202ENST00000312481 BDP1A6H8Y1 2624 aa7.36□□□□□ -1.23
COL6A5-202ENST00000312481 SONP18583 2426 aaKnown RBP7.36□□□□□ -1.23
COL6A5-202ENST00000312481 IGHV3-13P01766 116 aa7.36□□□□□ -1.23
COL6A5-202ENST00000312481 Q6ZSR3 168 aa7.36□□□□□ -1.23
COL6A5-202ENST00000312481 TRAV21A0A0B4J279 112 aa7.36□□□□□ -1.23
COL6A5-202ENST00000312481 SHISA7A6NL88 538 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms