RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 OR52E5Q8NH55 327 aa9.08□□□□□ -0.96
SCFD1-201ENST00000311943 DEDD2Q8WXF8 326 aa9.08□□□□□ -0.96
SCFD1-201ENST00000311943 ELOVL1Q9BW60 279 aa9.08□□□□□ -0.96
SCFD1-201ENST00000311943 ENY2Q9NPA8 101 aa9.08□□□□□ -0.96
SCFD1-201ENST00000311943 BATF3Q9NR55 127 aa9.08□□□□□ -0.96
SCFD1-201ENST00000311943 IGKV3-7A0A075B6H7 116 aa9.07□□□□□ -0.96
SCFD1-201ENST00000311943 WRBO00258 174 aa9.07□□□□□ -0.96
SCFD1-201ENST00000311943 POLR2GP62487 172 aaKnown RBP eCLIP9.07□□□□□ -0.96
SCFD1-201ENST00000311943 ZNF846Q147U1 533 aa9.07□□□□□ -0.96
SCFD1-201ENST00000311943 FAM209BQ5JX69 171 aa9.07□□□□□ -0.96
SCFD1-201ENST00000311943 ZNF436Q9C0F3 470 aaPredicted RBP9.07□□□□□ -0.96
SCFD1-201ENST00000311943 C15orf62A8K5M9 175 aa9.07□□□□□ -0.96
SCFD1-201ENST00000311943 GNG7O60262 68 aa9.07□□□□□ -0.96
SCFD1-201ENST00000311943 IFNA10P01566 189 aa9.07□□□□□ -0.96
SCFD1-201ENST00000311943 INSL3P51460 131 aa9.07□□□□□ -0.96
SCFD1-201ENST00000311943 MFAP4P55083 255 aa9.07□□□□□ -0.96
SCFD1-201ENST00000311943 TATDN3Q17R31 274 aa9.07□□□□□ -0.96
SCFD1-201ENST00000311943 TIGITQ495A1 244 aa9.07□□□□□ -0.96
SCFD1-201ENST00000311943 PRSS54Q6PEW0 395 aa9.07□□□□□ -0.96
SCFD1-201ENST00000311943 REC114Q7Z4M0 266 aa9.07□□□□□ -0.96
SCFD1-201ENST00000311943 S100ZQ8WXG8 99 aa9.07□□□□□ -0.96
SCFD1-201ENST00000311943 TMEM190Q8WZ59 177 aa9.07□□□□□ -0.96
SCFD1-201ENST00000311943 BSCL2Q96G97 398 aaPredicted RBP9.07□□□□□ -0.96
SCFD1-201ENST00000311943 C7orf50Q9BRJ6 194 aaKnown RBP9.07□□□□□ -0.96
SCFD1-201ENST00000311943 PAIP2BQ9ULR5 123 aaKnown RBP9.07□□□□□ -0.96
SCFD1-201ENST00000311943 FAM240BA0A1B0GVZ2 78 aa9.06□□□□□ -0.96
SCFD1-201ENST00000311943 LGALS9O00182 355 aa9.06□□□□□ -0.96
SCFD1-201ENST00000311943 NPY1RP25929 384 aa9.06□□□□□ -0.96
SCFD1-201ENST00000311943 RND2P52198 227 aa9.06□□□□□ -0.96
SCFD1-201ENST00000311943 ASAH1Q13510 395 aa9.06□□□□□ -0.96
SCFD1-201ENST00000311943 TOMM20LQ6UXN7 152 aa9.06□□□□□ -0.96
SCFD1-201ENST00000311943 PEMTQ9UBM1 199 aa9.06□□□□□ -0.96
SCFD1-201ENST00000311943 IGKV1-17P01599 117 aa9.05□□□□□ -0.96
SCFD1-201ENST00000311943 H2AFB2P0C5Z0 115 aa9.05□□□□□ -0.96
SCFD1-201ENST00000311943 GUCA2BQ16661 112 aa9.05□□□□□ -0.96
SCFD1-201ENST00000311943 FAM106AQ4KMX7 169 aa9.05□□□□□ -0.96
SCFD1-201ENST00000311943 C2orf83Q53S99 150 aa9.05□□□□□ -0.96
SCFD1-201ENST00000311943 SBSPONQ8IVN8 264 aa9.05□□□□□ -0.96
SCFD1-201ENST00000311943 DYNLRB2Q8TF09 96 aa9.05□□□□□ -0.96
SCFD1-201ENST00000311943 NPIPB3Q92617 1050 aa9.05□□□□□ -0.96
SCFD1-201ENST00000311943 ACY3Q96HD9 319 aa9.05□□□□□ -0.96
SCFD1-201ENST00000311943 PUS1Q9Y606 427 aaKnown RBP eCLIP9.05□□□□□ -0.96
SCFD1-201ENST00000311943 TENM3Q9P273 2699 aa9.05□□□□□ -0.96
SCFD1-201ENST00000311943 A8MWP6 167 aa9.05□□□□□ -0.96
SCFD1-201ENST00000311943 NUPL2O15504 423 aaKnown RBP9.05□□□□□ -0.96
SCFD1-201ENST00000311943 SCGB1D2O95969 90 aa9.05□□□□□ -0.96
SCFD1-201ENST00000311943 HTR2BP41595 481 aa9.05□□□□□ -0.96
SCFD1-201ENST00000311943 SRPXP78539 464 aa9.05□□□□□ -0.96
SCFD1-201ENST00000311943 LINC00299Q6ZSB3 139 aa9.05□□□□□ -0.96
SCFD1-201ENST00000311943 OR4D5Q8NGN0 318 aa9.05□□□□□ -0.96
SCFD1-201ENST00000311943 MITD1Q8WV92 249 aa9.05□□□□□ -0.96
SCFD1-201ENST00000311943 RNF2Q99496 336 aa9.05□□□□□ -0.96
SCFD1-201ENST00000311943 GPR61Q9BZJ8 451 aa9.05□□□□□ -0.96
SCFD1-201ENST00000311943 WDR12Q9GZL7 423 aaKnown RBP9.05□□□□□ -0.96
SCFD1-201ENST00000311943 ZFAND3Q9H8U3 227 aa9.05□□□□□ -0.96
SCFD1-201ENST00000311943 GSKIPQ9P0R6 139 aa9.05□□□□□ -0.96
SCFD1-201ENST00000311943 TMED3Q9Y3Q3 217 aa9.05□□□□□ -0.96
SCFD1-201ENST00000311943 SIX6O95475 246 aa9.04□□□□□ -0.96
SCFD1-201ENST00000311943 IGHV4-30-4P0DP06 118 aa9.04□□□□□ -0.96
SCFD1-201ENST00000311943 PAX9P55771 341 aa9.04□□□□□ -0.96
SCFD1-201ENST00000311943 ZNF124Q15973 351 aa9.04□□□□□ -0.96
SCFD1-201ENST00000311943 OR1L6Q8NGR2 347 aa9.04□□□□□ -0.96
SCFD1-201ENST00000311943 HIPK2Q9H2X6 1198 aa9.04□□□□□ -0.96
SCFD1-201ENST00000311943 NBEAL2Q6ZNJ1 2754 aa9.04□□□□□ -0.96
SCFD1-201ENST00000311943 FAM25EA8MYX2 175 aa9.04□□□□□ -0.96
SCFD1-201ENST00000311943 SYNGR2O43760 224 aa9.04□□□□□ -0.96
SCFD1-201ENST00000311943 CLN5O75503 358 aa9.04□□□□□ -0.96
SCFD1-201ENST00000311943 FRMD6-AS1P0C7T7 363 aa9.04□□□□□ -0.96
SCFD1-201ENST00000311943 IGLC1P0CG04 106 aa9.04□□□□□ -0.96
SCFD1-201ENST00000311943 ZNF90Q03938 601 aa9.04□□□□□ -0.96
SCFD1-201ENST00000311943 IAH1Q2TAA2 248 aaPredicted RBP9.04□□□□□ -0.96
SCFD1-201ENST00000311943 SPANXN5Q5MJ07 72 aa9.04□□□□□ -0.96
SCFD1-201ENST00000311943 DEFB125Q8N687 156 aa9.04□□□□□ -0.96
SCFD1-201ENST00000311943 DUSP18Q8NEJ0 188 aa9.04□□□□□ -0.96
SCFD1-201ENST00000311943 COQ8AQ8NI60 647 aa9.04□□□□□ -0.96
SCFD1-201ENST00000311943 SIGLEC8Q9NYZ4 499 aa9.04□□□□□ -0.96
SCFD1-201ENST00000311943 UBQLN2Q9UHD9 624 aa9.04□□□□□ -0.96
SCFD1-201ENST00000311943 IGKV1OR2-108A0A075B7D4 117 aa9.03□□□□□ -0.96
SCFD1-201ENST00000311943 NDUFA4O00483 81 aa9.03□□□□□ -0.96
SCFD1-201ENST00000311943 CYB5BO43169 146 aa9.03□□□□□ -0.96
SCFD1-201ENST00000311943 SSSCA1O60232 199 aa9.03□□□□□ -0.96
SCFD1-201ENST00000311943 IFNA4P05014 189 aa9.03□□□□□ -0.96
SCFD1-201ENST00000311943 C8orf88P0DMB2 117 aa9.03□□□□□ -0.96
SCFD1-201ENST00000311943 TFPI2P48307 235 aa9.03□□□□□ -0.96
SCFD1-201ENST00000311943 SUB1P53999 127 aaKnown RBP eCLIP9.03□□□□□ -0.961e-7■■■■□ 20.1
SCFD1-201ENST00000311943 ID3Q02535 119 aa9.03□□□□□ -0.96
SCFD1-201ENST00000311943 TMEM182Q6ZP80 229 aaPredicted RBP9.03□□□□□ -0.96
SCFD1-201ENST00000311943 GBGT1Q8N5D6 347 aa9.03□□□□□ -0.96
SCFD1-201ENST00000311943 OR4X1Q8NH49 305 aa9.03□□□□□ -0.96
SCFD1-201ENST00000311943 CITED4Q96RK1 184 aa9.03□□□□□ -0.96
SCFD1-201ENST00000311943 IGKV1D-37A0A075B6S9 117 aa9.02□□□□□ -0.97
SCFD1-201ENST00000311943 DUXBA0A1W2PPF3 345 aa9.02□□□□□ -0.97
SCFD1-201ENST00000311943 GATA2P23769 480 aaPredicted RBP9.02□□□□□ -0.97
SCFD1-201ENST00000311943 FCGR2BP31994 310 aaPredicted RBP9.02□□□□□ -0.97
SCFD1-201ENST00000311943 CD69Q07108 199 aa9.02□□□□□ -0.97
SCFD1-201ENST00000311943 GAMTQ14353 236 aa9.02□□□□□ -0.97
SCFD1-201ENST00000311943 SPSB3Q6PJ21 355 aa9.02□□□□□ -0.97
SCFD1-201ENST00000311943 SLC16A13Q7RTY0 426 aa9.02□□□□□ -0.97
SCFD1-201ENST00000311943 ZNF431Q8TF32 576 aaPredicted RBP9.02□□□□□ -0.97
SCFD1-201ENST00000311943 ST8SIA2Q92186 375 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms