RNA–Protein interactions for RNA: ENST00000308873.10

RUNX3-201, Transcript of runt related transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX3, Length 3,861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-201ENST00000308873 HLA-DQA1P01909 254 aa12.12□□□□□ -0.47
RUNX3-201ENST00000308873 LOXL3P58215 753 aa12.12□□□□□ -0.47
RUNX3-201ENST00000308873 SELENOTP62341 195 aa12.12□□□□□ -0.47
RUNX3-201ENST00000308873 KLHDC1Q8N7A1 406 aa12.12□□□□□ -0.47
RUNX3-201ENST00000308873 TSKUQ8WUA8 353 aa12.12□□□□□ -0.47
RUNX3-201ENST00000308873 PRNDQ9UKY0 176 aa12.12□□□□□ -0.47
RUNX3-201ENST00000308873 DYSFO75923 2080 aa12.12□□□□□ -0.47
RUNX3-201ENST00000308873 HYPMO75409 117 aa12.12□□□□□ -0.47
RUNX3-201ENST00000308873 OR52E5Q8NH55 327 aa12.12□□□□□ -0.47
RUNX3-201ENST00000308873 SARAFQ96BY9 339 aa12.12□□□□□ -0.47
RUNX3-201ENST00000308873 HIGD1CA8MV81 97 aa12.12□□□□□ -0.47
RUNX3-201ENST00000308873 IGKV3-15P01624 115 aa12.12□□□□□ -0.47
RUNX3-201ENST00000308873 MT-ND6P03923 174 aa12.12□□□□□ -0.47
RUNX3-201ENST00000308873 AREGP15514 252 aa12.12□□□□□ -0.47
RUNX3-201ENST00000308873 PRR7Q8TB68 274 aa12.12□□□□□ -0.47
RUNX3-201ENST00000308873 ISLRO14498 428 aa12.11□□□□□ -0.47
RUNX3-201ENST00000308873 SNAI2O43623 268 aa12.11□□□□□ -0.47
RUNX3-201ENST00000308873 APOA2P02652 100 aa12.11□□□□□ -0.47
RUNX3-201ENST00000308873 C10orf113Q5VZT2 155 aa12.11□□□□□ -0.47
RUNX3-201ENST00000308873 C19orf35Q6ZS72 473 aa12.11□□□□□ -0.47
RUNX3-201ENST00000308873 DAZAP1Q96EP5 407 aaKnown RBP12.11□□□□□ -0.47
RUNX3-201ENST00000308873 SSUH2Q9Y2M2 353 aa12.11□□□□□ -0.47
RUNX3-201ENST00000308873 J3QW42 95 aa12.11□□□□□ -0.47
RUNX3-201ENST00000308873 RPRMLQ8N4K4 120 aa12.11□□□□□ -0.47
RUNX3-201ENST00000308873 CCL17Q92583 94 aa12.11□□□□□ -0.47
RUNX3-201ENST00000308873 KBTBD11-OT1A0A1B0GTJ5 212 aa12.11□□□□□ -0.47
RUNX3-201ENST00000308873 TEX50A0A1B0GTY4 177 aa12.11□□□□□ -0.47
RUNX3-201ENST00000308873 C9JCJ5 164 aa12.11□□□□□ -0.47
RUNX3-201ENST00000308873 ETFRF1Q6IPR1 90 aa12.11□□□□□ -0.47
RUNX3-201ENST00000308873 FAM90A1Q86YD7 464 aa12.11□□□□□ -0.47
RUNX3-201ENST00000308873 FLYWCH2Q96CP2 140 aaKnown RBP12.11□□□□□ -0.47
RUNX3-201ENST00000308873 PGLYRP4Q96LB8 373 aa12.11□□□□□ -0.47
RUNX3-201ENST00000308873 ADGRG4Q8IZF6 3080 aa12.1□□□□□ -0.47
RUNX3-201ENST00000308873 PCSK5Q92824 1860 aa12.1□□□□□ -0.47
RUNX3-201ENST00000308873 PGPA6NDG6 321 aa12.1□□□□□ -0.47
RUNX3-201ENST00000308873 CBY3A6NI87 242 aa12.1□□□□□ -0.47
RUNX3-201ENST00000308873 KIR2DS2P43631 304 aa12.1□□□□□ -0.47
RUNX3-201ENST00000308873 ZNF138P52744 262 aa12.1□□□□□ -0.47
RUNX3-201ENST00000308873 MRPL20Q9BYC9 149 aaKnown RBP12.1□□□□□ -0.47
RUNX3-201ENST00000308873 SAP30LQ9HAJ7 183 aa12.1□□□□□ -0.47
RUNX3-201ENST00000308873 DLX1P56177 255 aa12.1□□□□□ -0.47
RUNX3-201ENST00000308873 A0A1B0GWJ7 208 aa12.1□□□□□ -0.47
RUNX3-201ENST00000308873 SFXN3Q9BWM7 321 aa12.1□□□□□ -0.47
RUNX3-201ENST00000308873 BET1LQ9NYM9 111 aa12.1□□□□□ -0.47
RUNX3-201ENST00000308873 ATMQ13315 3056 aa12.09□□□□□ -0.47
RUNX3-201ENST00000308873 Q0VG73 95 aa12.09□□□□□ -0.47
RUNX3-201ENST00000308873 RNF7Q9UBF6 113 aa12.09□□□□□ -0.47
RUNX3-201ENST00000308873 PRR20EP86478 221 aa12.09□□□□□ -0.47
RUNX3-201ENST00000308873 PRR20CP86479 221 aa12.09□□□□□ -0.47
RUNX3-201ENST00000308873 PRR20DP86480 221 aa12.09□□□□□ -0.47
RUNX3-201ENST00000308873 PRR20BP86481 221 aa12.09□□□□□ -0.47
RUNX3-201ENST00000308873 PRR20AP86496 221 aa12.09□□□□□ -0.47
RUNX3-201ENST00000308873 C17orf58Q2M2W7 97 aa12.09□□□□□ -0.47
RUNX3-201ENST00000308873 KIR3DL3Q8N743 410 aa12.09□□□□□ -0.47
RUNX3-201ENST00000308873 OR4C5Q8NGB2 326 aa12.09□□□□□ -0.47
RUNX3-201ENST00000308873 ZNF503Q96F45 646 aa12.09□□□□□ -0.47
RUNX3-201ENST00000308873 OSTCQ9NRP0 149 aa12.09□□□□□ -0.47
RUNX3-201ENST00000308873 WASHC3Q9Y3C0 194 aa12.09□□□□□ -0.47
RUNX3-201ENST00000308873 APC2O95996 2303 aa12.09□□□□□ -0.47
RUNX3-201ENST00000308873 PRSS46E5RG02 174 aa12.09□□□□□ -0.47
RUNX3-201ENST00000308873 SLC25A17O43808 307 aa12.09□□□□□ -0.47
RUNX3-201ENST00000308873 IGLC2P0DOY2 106 aa12.09□□□□□ -0.47
RUNX3-201ENST00000308873 IGLC3P0DOY3 106 aa12.09□□□□□ -0.47
RUNX3-201ENST00000308873 SSX8Q7RTT4 187 aa12.09□□□□□ -0.47
RUNX3-201ENST00000308873 NUDT10Q8NFP7 164 aa12.09□□□□□ -0.47
RUNX3-201ENST00000308873 NUDT11Q96G61 164 aa12.09□□□□□ -0.47
RUNX3-201ENST00000308873 SLC25A33Q9BSK2 321 aa12.09□□□□□ -0.47
RUNX3-201ENST00000308873 GSX1Q9H4S2 264 aaPredicted RBP12.09□□□□□ -0.47
RUNX3-201ENST00000308873 LINC00305Q7Z4B0 112 aa12.08□□□□□ -0.48
RUNX3-201ENST00000308873 WFDC8Q8IUA0 241 aa12.08□□□□□ -0.48
RUNX3-201ENST00000308873 NUP35Q8NFH5 326 aa12.08□□□□□ -0.48
RUNX3-201ENST00000308873 C18orf32Q8TCD1 76 aa12.08□□□□□ -0.48
RUNX3-201ENST00000308873 TMEM14BQ9NUH8 114 aa12.08□□□□□ -0.48
RUNX3-201ENST00000308873 PRRX1P54821 245 aa12.08□□□□□ -0.48
RUNX3-201ENST00000308873 PDPNQ86YL7 162 aa12.08□□□□□ -0.48
RUNX3-201ENST00000308873 SMG1Q96Q15 3661 aaKnown RBP12.08□□□□□ -0.48
RUNX3-201ENST00000308873 TRBV9A0A0B4J1U6 114 aa12.08□□□□□ -0.48
RUNX3-201ENST00000308873 UPK2O00526 184 aa12.08□□□□□ -0.48
RUNX3-201ENST00000308873 CT45A6P0DMU7 189 aa12.08□□□□□ -0.48
RUNX3-201ENST00000308873 CT45A5P0DMU8 189 aa12.08□□□□□ -0.48
RUNX3-201ENST00000308873 CT45A7P0DMV0 189 aa12.08□□□□□ -0.48
RUNX3-201ENST00000308873 COMPP49747 757 aaPredicted RBP12.08□□□□□ -0.48
RUNX3-201ENST00000308873 DIAPH2-AS1Q14236 149 aa12.08□□□□□ -0.48
RUNX3-201ENST00000308873 FOXA2Q9Y261 457 aaPredicted RBP12.08□□□□□ -0.48
RUNX3-201ENST00000308873 E7EUB6 86 aa12.07□□□□□ -0.48
RUNX3-201ENST00000308873 CHEK1O14757 476 aa12.07□□□□□ -0.48
RUNX3-201ENST00000308873 FAM27E3Q08E93 113 aa12.07□□□□□ -0.48
RUNX3-201ENST00000308873 TBR1Q16650 682 aa12.07□□□□□ -0.48
RUNX3-201ENST00000308873 ZFP30Q9Y2G7 519 aa12.07□□□□□ -0.48
RUNX3-201ENST00000308873 ZGRF1Q86YA3 2104 aa12.07□□□□□ -0.48
RUNX3-201ENST00000308873 PPOXP50336 477 aa12.07□□□□□ -0.48
RUNX3-201ENST00000308873 PRCDQ00LT1 54 aa12.07□□□□□ -0.48
RUNX3-201ENST00000308873 COLQQ9Y215 455 aaPredicted RBP12.07□□□□□ -0.48
RUNX3-201ENST00000308873 IZUMO1RA6ND01 250 aa12.07□□□□□ -0.48
RUNX3-201ENST00000308873 PEX7O00628 323 aa12.07□□□□□ -0.48
RUNX3-201ENST00000308873 TNFSF4P23510 183 aa12.07□□□□□ -0.48
RUNX3-201ENST00000308873 NIT1Q86X76 327 aa12.07□□□□□ -0.48
RUNX3-201ENST00000308873 MALRD1Q5VYJ5 2156 aa12.06□□□□□ -0.48
RUNX3-201ENST00000308873 TRAV8-1A0A0A6YYK1 113 aa12.06□□□□□ -0.48
RUNX3-201ENST00000308873 TRGV8A0A0C4DH27 118 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms