RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 FAM110DQ8TAY7 271 aaPredicted RBP13.81□□□□□ -0.2
KRT28-201ENST00000306658 CITED4Q96RK1 184 aa13.81□□□□□ -0.2
KRT28-201ENST00000306658 VSIRQ9H7M9 311 aa13.81□□□□□ -0.2
KRT28-201ENST00000306658 YAE1D1Q9NRH1 226 aa13.81□□□□□ -0.2
KRT28-201ENST00000306658 PXMP4Q9Y6I8 212 aa13.81□□□□□ -0.2
KRT28-201ENST00000306658 ZNF469Q96JG9 3925 aaPredicted RBP13.8□□□□□ -0.2
KRT28-201ENST00000306658 IGKV1OR2-108A0A075B7D4 117 aa13.8□□□□□ -0.2
KRT28-201ENST00000306658 I3L2K1 104 aa13.8□□□□□ -0.2
KRT28-201ENST00000306658 IGHV3-48P01763 117 aa13.8□□□□□ -0.2
KRT28-201ENST00000306658 M6PRP20645 277 aa13.8□□□□□ -0.2
KRT28-201ENST00000306658 MARC2Q969Z3 335 aa13.8□□□□□ -0.2
KRT28-201ENST00000306658 ACANP16112 2415 aa13.8□□□□□ -0.2
KRT28-201ENST00000306658 AKAP9Q99996 3911 aa13.8□□□□□ -0.2
KRT28-201ENST00000306658 IGLV11-55A0A075B6I3 123 aa13.79□□□□□ -0.2
KRT28-201ENST00000306658 LINC01548A6NM66 108 aa13.79□□□□□ -0.2
KRT28-201ENST00000306658 TEX46H3BTG2 121 aa13.79□□□□□ -0.2
KRT28-201ENST00000306658 IGHG2P01859 326 aa13.79□□□□□ -0.2
KRT28-201ENST00000306658 HIST1H1BP16401 226 aaKnown RBP13.79□□□□□ -0.2
KRT28-201ENST00000306658 HNF1AP20823 631 aa13.79□□□□□ -0.2
KRT28-201ENST00000306658 OR10J1P30954 320 aa13.79□□□□□ -0.2
KRT28-201ENST00000306658 B2MP61769 119 aa13.79□□□□□ -0.2
KRT28-201ENST00000306658 MIC13Q5XKP0 118 aa13.79□□□□□ -0.2
KRT28-201ENST00000306658 IL34Q6ZMJ4 242 aa13.79□□□□□ -0.2
KRT28-201ENST00000306658 THAP8Q8NA92 274 aa13.79□□□□□ -0.2
KRT28-201ENST00000306658 OR10G4Q8NGN3 311 aa13.79□□□□□ -0.2
KRT28-201ENST00000306658 OR10G9Q8NGN4 311 aa13.79□□□□□ -0.2
KRT28-201ENST00000306658 OR10G7Q8NGN6 311 aa13.79□□□□□ -0.2
KRT28-201ENST00000306658 ZNF48Q96MX3 618 aaPredicted RBP13.79□□□□□ -0.2
KRT28-201ENST00000306658 VPREB3Q9UKI3 123 aa13.79□□□□□ -0.2
KRT28-201ENST00000306658 SLC45A2Q9UMX9 530 aa13.79□□□□□ -0.2
KRT28-201ENST00000306658 ZFP92A6NM28 416 aa13.79□□□□□ -0.2
KRT28-201ENST00000306658 CRIP2P52943 208 aaPredicted RBP13.79□□□□□ -0.2
KRT28-201ENST00000306658 RAB2AP61019 212 aa13.79□□□□□ -0.2
KRT28-201ENST00000306658 SLC35E3Q7Z769 313 aa13.79□□□□□ -0.2
KRT28-201ENST00000306658 STPG3Q8N7X2 389 aa13.79□□□□□ -0.2
KRT28-201ENST00000306658 FANCD2OSQ96PS1 177 aa13.79□□□□□ -0.2
KRT28-201ENST00000306658 SLC39A9Q9NUM3 307 aa13.79□□□□□ -0.2
KRT28-201ENST00000306658 IGHV3-21A0A0B4J1V1 117 aa13.78□□□□□ -0.2
KRT28-201ENST00000306658 TRAV41A0A0B4J266 112 aa13.78□□□□□ -0.2
KRT28-201ENST00000306658 MFSD2BA6NFX1 497 aa13.78□□□□□ -0.2
KRT28-201ENST00000306658 K7EIM0 57 aa13.78□□□□□ -0.2
KRT28-201ENST00000306658 HBE1P02100 147 aa13.78□□□□□ -0.2
KRT28-201ENST00000306658 IGF1P05019 195 aa13.78□□□□□ -0.2
KRT28-201ENST00000306658 PRR20EP86478 221 aa13.78□□□□□ -0.2
KRT28-201ENST00000306658 PRR20CP86479 221 aa13.78□□□□□ -0.2
KRT28-201ENST00000306658 PRR20DP86480 221 aa13.78□□□□□ -0.2
KRT28-201ENST00000306658 PRR20BP86481 221 aa13.78□□□□□ -0.2
KRT28-201ENST00000306658 PRR20AP86496 221 aa13.78□□□□□ -0.2
KRT28-201ENST00000306658 IL17RELQ6ZVW7 336 aa13.78□□□□□ -0.2
KRT28-201ENST00000306658 RPP25LQ8N5L8 163 aaKnown RBP13.78□□□□□ -0.2
KRT28-201ENST00000306658 COMMD1Q8N668 190 aa13.78□□□□□ -0.2
KRT28-201ENST00000306658 OR4X1Q8NH49 305 aa13.78□□□□□ -0.2
KRT28-201ENST00000306658 SFT2D1Q8WV19 159 aa13.78□□□□□ -0.2
KRT28-201ENST00000306658 ACTR3CQ9C0K3 210 aaPredicted RBP13.78□□□□□ -0.2
KRT28-201ENST00000306658 MRPL36Q9P0J6 103 aaKnown RBP13.78□□□□□ -0.2
KRT28-201ENST00000306658 TCRBV4S1A1TA0A5B7 111 aa13.77□□□□□ -0.21
KRT28-201ENST00000306658 RAB19A4D1S5 217 aa13.77□□□□□ -0.21
KRT28-201ENST00000306658 HOXA3O43365 443 aaPredicted RBP13.77□□□□□ -0.21
KRT28-201ENST00000306658 SELENOTP62341 195 aa13.77□□□□□ -0.21
KRT28-201ENST00000306658 BLCAPP62952 87 aa13.77□□□□□ -0.21
KRT28-201ENST00000306658 CYP2G1PQ6ZSU1 146 aa13.77□□□□□ -0.21
KRT28-201ENST00000306658 EIF4E3Q8N5X7 224 aaKnown RBP13.77□□□□□ -0.21
KRT28-201ENST00000306658 BPIFCQ8NFQ6 507 aa13.77□□□□□ -0.21
KRT28-201ENST00000306658 MBD3L1Q8WWY6 194 aa13.77□□□□□ -0.21
KRT28-201ENST00000306658 RCC1LQ96I51 464 aaKnown RBP13.77□□□□□ -0.21
KRT28-201ENST00000306658 TNFRSF19Q9NS68 423 aa13.77□□□□□ -0.21
KRT28-201ENST00000306658 MXRA5Q9NR99 2828 aa13.77□□□□□ -0.21
KRT28-201ENST00000306658 TRAV1-1A0A0B4J248 108 aa13.76□□□□□ -0.21
KRT28-201ENST00000306658 G3V318 75 aa13.76□□□□□ -0.21
KRT28-201ENST00000306658 YIF1AO95070 293 aa13.76□□□□□ -0.21
KRT28-201ENST00000306658 S100A1P23297 94 aa13.76□□□□□ -0.21
KRT28-201ENST00000306658 KLK9Q2XQG4 91 aa13.76□□□□□ -0.21
KRT28-201ENST00000306658 TRGV9Q99603 122 aa13.76□□□□□ -0.21
KRT28-201ENST00000306658 ZNF355PQ9NSJ1 428 aa13.76□□□□□ -0.21
KRT28-201ENST00000306658 KLK9Q9UKQ9 250 aa13.76□□□□□ -0.21
KRT28-201ENST00000306658 SONP18583 2426 aaKnown RBP13.76□□□□□ -0.21
KRT28-201ENST00000306658 IGKV1D-37A0A075B6S9 117 aa13.75□□□□□ -0.21
KRT28-201ENST00000306658 CTXND1A0A1B0GTU2 59 aa13.75□□□□□ -0.21
KRT28-201ENST00000306658 A0A1W2PPV4 95 aa13.75□□□□□ -0.21
KRT28-201ENST00000306658 AP4M1O00189 453 aa13.75□□□□□ -0.21
KRT28-201ENST00000306658 LINC00869P0C866 280 aa13.75□□□□□ -0.21
KRT28-201ENST00000306658 RBMS3Q6XE24 437 aaKnown RBP13.75□□□□□ -0.21
KRT28-201ENST00000306658 SIGLECL1Q8N7X8 197 aa13.75□□□□□ -0.21
KRT28-201ENST00000306658 TMEM160Q9NX00 188 aa13.75□□□□□ -0.21
KRT28-201ENST00000306658 OR2J3O76001 311 aa13.75□□□□□ -0.21
KRT28-201ENST00000306658 NPBWR1P48145 328 aa13.75□□□□□ -0.21
KRT28-201ENST00000306658 MFAP4P55083 255 aa13.75□□□□□ -0.21
KRT28-201ENST00000306658 SCGB2A2Q13296 93 aa13.75□□□□□ -0.21
KRT28-201ENST00000306658 ZNF726P1Q15940 193 aa13.75□□□□□ -0.21
KRT28-201ENST00000306658 C19orf54Q5BKX5 351 aa13.75□□□□□ -0.21
KRT28-201ENST00000306658 FAM122CQ6P4D5 195 aa13.75□□□□□ -0.21
KRT28-201ENST00000306658 FBXL7Q9UJT9 491 aa13.75□□□□□ -0.21
KRT28-201ENST00000306658 A0A1B0GV50 99 aa13.74□□□□□ -0.21
KRT28-201ENST00000306658 SEC14L6B5MCN3 397 aa13.74□□□□□ -0.21
KRT28-201ENST00000306658 CLN5O75503 358 aa13.74□□□□□ -0.21
KRT28-201ENST00000306658 GATA2P23769 480 aaPredicted RBP13.74□□□□□ -0.21
KRT28-201ENST00000306658 CDC34P49427 236 aaPredicted RBP13.74□□□□□ -0.21
KRT28-201ENST00000306658 GCSAMLQ5JQS6 135 aa13.74□□□□□ -0.21
KRT28-201ENST00000306658 SPSB3Q6PJ21 355 aa13.74□□□□□ -0.21
KRT28-201ENST00000306658 UQCC3Q6UW78 93 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms