RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 IGHV1-69-2A0A0G2JMI3 117 aa11.33□□□□□ -0.6
TRIM56-201ENST00000306085 IGFBP6P24592 240 aaPredicted RBP11.33□□□□□ -0.6
TRIM56-201ENST00000306085 PCDH15Q96QU1 1955 aa11.33□□□□□ -0.6
TRIM56-201ENST00000306085 TBX6O95947 436 aaPredicted RBP11.33□□□□□ -0.6
TRIM56-201ENST00000306085 WBP1LQ9NX94 342 aa11.33□□□□□ -0.6
TRIM56-201ENST00000306085 VDAC2P45880 294 aaPredicted RBP11.33□□□□□ -0.6
TRIM56-201ENST00000306085 POC1AQ8NBT0 407 aa11.33□□□□□ -0.6
TRIM56-201ENST00000306085 ABHD17AQ96GS6 310 aa11.33□□□□□ -0.6
TRIM56-201ENST00000306085 FSTP19883 344 aa11.33□□□□□ -0.6
TRIM56-201ENST00000306085 TMEM187Q14656 261 aa11.32□□□□□ -0.6
TRIM56-201ENST00000306085 DRAM1Q8N682 238 aa11.32□□□□□ -0.6
TRIM56-201ENST00000306085 ZAR1Q86SH2 424 aa11.32□□□□□ -0.6
TRIM56-201ENST00000306085 DMRTC2Q8IXT2 367 aaPredicted RBP11.32□□□□□ -0.6
TRIM56-201ENST00000306085 SLC50A1Q9BRV3 221 aa11.32□□□□□ -0.6
TRIM56-201ENST00000306085 TMEM126AQ9H061 195 aa11.32□□□□□ -0.6
TRIM56-201ENST00000306085 IGHV1OR15-9A0A0B4J2B8 117 aa11.32□□□□□ -0.6
TRIM56-201ENST00000306085 SPAARA0A1B0GVQ0 90 aa11.32□□□□□ -0.6
TRIM56-201ENST00000306085 FAM90A2PQ658T7 463 aa11.32□□□□□ -0.6
TRIM56-201ENST00000306085 ZP1P60852 638 aa11.32□□□□□ -0.6
TRIM56-201ENST00000306085 MIR17HGQ75NE6 70 aa11.32□□□□□ -0.6
TRIM56-201ENST00000306085 IFI27L1Q96BM0 104 aa11.32□□□□□ -0.6
TRIM56-201ENST00000306085 SCRT1Q9BWW7 348 aa11.32□□□□□ -0.6
TRIM56-201ENST00000306085 JPT1Q9UK76 154 aa11.32□□□□□ -0.6
TRIM56-201ENST00000306085 PRADC1Q9BSG0 188 aa11.32□□□□□ -0.6
TRIM56-201ENST00000306085 TRAV9-1A0A075B6T8 112 aa11.31□□□□□ -0.6
TRIM56-201ENST00000306085 A0A087X0K7 114 aa11.31□□□□□ -0.6
TRIM56-201ENST00000306085 ADAMTSL5Q6ZMM2 481 aa11.31□□□□□ -0.6
TRIM56-201ENST00000306085 WNK3Q9BYP7 1800 aa11.31□□□□□ -0.6
TRIM56-201ENST00000306085 KLF14Q8TD94 323 aaPredicted RBP11.31□□□□□ -0.6
TRIM56-201ENST00000306085 NSUN5P1Q3KNT7 163 aa11.31□□□□□ -0.6
TRIM56-201ENST00000306085 C1orf43Q9BWL3 253 aa11.31□□□□□ -0.6
TRIM56-201ENST00000306085 IGLV3-16A0A075B6K0 115 aa11.31□□□□□ -0.6
TRIM56-201ENST00000306085 TRAV12-1A0A0B4J245 112 aa11.31□□□□□ -0.6
TRIM56-201ENST00000306085 FOXH1O75593 365 aa11.31□□□□□ -0.6
TRIM56-201ENST00000306085 BCL6BQ8N143 479 aaPredicted RBP11.31□□□□□ -0.6
TRIM56-201ENST00000306085 ZNRF1Q8ND25 227 aa11.31□□□□□ -0.6
TRIM56-201ENST00000306085 DUTP33316 252 aaKnown RBP11.31□□□□□ -0.6
TRIM56-201ENST00000306085 ZP4Q12836 540 aa11.31□□□□□ -0.6
TRIM56-201ENST00000306085 ZXDCQ2QGD7 858 aaPredicted RBP11.31□□□□□ -0.6
TRIM56-201ENST00000306085 TMEM92Q6UXU6 159 aa11.31□□□□□ -0.6
TRIM56-201ENST00000306085 OR5P3Q8WZ94 311 aa11.31□□□□□ -0.6
TRIM56-201ENST00000306085 TMEM54Q969K7 222 aa11.31□□□□□ -0.6
TRIM56-201ENST00000306085 PRR33A8MZF0 331 aa11.31□□□□□ -0.6
TRIM56-201ENST00000306085 UMODP07911 640 aa11.31□□□□□ -0.6
TRIM56-201ENST00000306085 IFI27L2Q9H2X8 130 aa11.31□□□□□ -0.6
TRIM56-201ENST00000306085 C9JAW5 83 aa11.31□□□□□ -0.6
TRIM56-201ENST00000306085 COL9A1P20849 921 aa11.31□□□□□ -0.6
TRIM56-201ENST00000306085 KCNK17Q96T54 332 aa11.3□□□□□ -0.6
TRIM56-201ENST00000306085 IFITM2Q01629 132 aa11.3□□□□□ -0.6
TRIM56-201ENST00000306085 PILRBQ9UKJ0 227 aa11.3□□□□□ -0.6
TRIM56-201ENST00000306085 A0A087WWC5 75 aa11.3□□□□□ -0.6
TRIM56-201ENST00000306085 KIAA0040Q15053 153 aa11.3□□□□□ -0.6
TRIM56-201ENST00000306085 CRIM1Q9NZV1 1036 aa11.3□□□□□ -0.6
TRIM56-201ENST00000306085 PRB2P02812 416 aaPredicted RBP11.3□□□□□ -0.6
TRIM56-201ENST00000306085 TMEM258P61165 79 aa11.3□□□□□ -0.6
TRIM56-201ENST00000306085 ERCC8Q13216 396 aa11.3□□□□□ -0.6
TRIM56-201ENST00000306085 FABP5P3A8MUU1 101 aa11.3□□□□□ -0.6
TRIM56-201ENST00000306085 MYOD1P15172 320 aa11.3□□□□□ -0.6
TRIM56-201ENST00000306085 CHCHD1Q96BP2 118 aaKnown RBP11.3□□□□□ -0.6
TRIM56-201ENST00000306085 NDUFS6O75380 124 aaKnown RBP11.3□□□□□ -0.6
TRIM56-201ENST00000306085 OTORQ9NRC9 128 aa11.3□□□□□ -0.6
TRIM56-201ENST00000306085 GATA2P23769 480 aaPredicted RBP11.3□□□□□ -0.6
TRIM56-201ENST00000306085 C9orf50Q5SZB4 431 aa11.3□□□□□ -0.6
TRIM56-201ENST00000306085 RBBP6Q7Z6E9 1792 aaKnown RBP11.29□□□□□ -0.6
TRIM56-201ENST00000306085 TRGV11A0A075B6L2 103 aa11.29□□□□□ -0.6
TRIM56-201ENST00000306085 CELA2AP08217 269 aa11.29□□□□□ -0.6
TRIM56-201ENST00000306085 ZNF721Q8TF20 911 aa11.29□□□□□ -0.6
TRIM56-201ENST00000306085 MSGN1A6NI15 193 aa11.29□□□□□ -0.6
TRIM56-201ENST00000306085 NPIPB13A6NJU9 1138 aa11.29□□□□□ -0.6
TRIM56-201ENST00000306085 NPIPB5A8MRT5 1133 aa11.29□□□□□ -0.6
TRIM56-201ENST00000306085 PSG1P11464 419 aa11.29□□□□□ -0.6
TRIM56-201ENST00000306085 SELLP14151 372 aa11.29□□□□□ -0.6
TRIM56-201ENST00000306085 LHX2P50458 406 aa11.29□□□□□ -0.6
TRIM56-201ENST00000306085 IRF3Q14653 427 aa11.29□□□□□ -0.6
TRIM56-201ENST00000306085 SONP18583 2426 aaKnown RBP11.29□□□□□ -0.6
TRIM56-201ENST00000306085 PTPN13Q12923 2485 aa11.29□□□□□ -0.6
TRIM56-201ENST00000306085 TRAV13-1A0A0B4J241 112 aa11.29□□□□□ -0.6
TRIM56-201ENST00000306085 EGR2P11161 476 aaPredicted RBP11.29□□□□□ -0.6
TRIM56-201ENST00000306085 ZNF708P17019 499 aa11.29□□□□□ -0.6
TRIM56-201ENST00000306085 ZNF362Q5T0B9 420 aaPredicted RBP11.29□□□□□ -0.6
TRIM56-201ENST00000306085 TRAV25A0A0B4J276 109 aa11.29□□□□□ -0.6
TRIM56-201ENST00000306085 RBM3P98179 157 aaKnown RBP11.29□□□□□ -0.6
TRIM56-201ENST00000306085 PCOLCEQ15113 449 aa11.29□□□□□ -0.6
TRIM56-201ENST00000306085 ZNF474Q6S9Z5 364 aaPredicted RBP11.29□□□□□ -0.6
TRIM56-201ENST00000306085 TEX43Q6ZNM6 134 aa11.29□□□□□ -0.6
TRIM56-201ENST00000306085 QSER1Q2KHR3 1735 aa11.29□□□□□ -0.6
TRIM56-201ENST00000306085 C6orf226Q5I0X4 101 aa11.29□□□□□ -0.6
TRIM56-201ENST00000306085 DTX1Q86Y01 620 aa11.29□□□□□ -0.6
TRIM56-201ENST00000306085 TMEM8BA6NDV4 472 aa11.28□□□□□ -0.6
TRIM56-201ENST00000306085 DTX4Q9Y2E6 619 aa11.28□□□□□ -0.6
TRIM56-201ENST00000306085 KIR3DS1Q14943 382 aa11.28□□□□□ -0.6
TRIM56-201ENST00000306085 GUSBP1Q15486 140 aa11.28□□□□□ -0.6
TRIM56-201ENST00000306085 PSG3Q16557 428 aa11.28□□□□□ -0.6
TRIM56-201ENST00000306085 ISXQ2M1V0 245 aa11.28□□□□□ -0.6
TRIM56-201ENST00000306085 FOXL2P58012 376 aa11.28□□□□□ -0.6
TRIM56-201ENST00000306085 TMEM144Q7Z5S9 345 aa11.28□□□□□ -0.6
TRIM56-201ENST00000306085 HLA-DQB1P01920 261 aa11.28□□□□□ -0.6
TRIM56-201ENST00000306085 CACNG8Q8WXS5 425 aa11.28□□□□□ -0.6
TRIM56-201ENST00000306085 A0A0G2JMM0 328 aa11.28□□□□□ -0.6
TRIM56-201ENST00000306085 A0A1W2PPB8 328 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms