RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 CCDC190Q86UF4 302 aa19.77■□□□□ 0.76
CDKN2A-201ENST00000304494 TMEM116Q8NCL8 245 aa19.77■□□□□ 0.76
CDKN2A-201ENST00000304494 ZNF414Q96IQ9 312 aa19.77■□□□□ 0.76
CDKN2A-201ENST00000304494 GINS3Q9BRX5 216 aa19.77■□□□□ 0.76
CDKN2A-201ENST00000304494 HIPK2Q9H2X6 1198 aa19.77■□□□□ 0.76
CDKN2A-201ENST00000304494 HEYLQ9NQ87 328 aaPredicted RBP19.77■□□□□ 0.76
CDKN2A-201ENST00000304494 TRAV14DV4A0A0A6YYC5 116 aa19.76■□□□□ 0.75
CDKN2A-201ENST00000304494 PIGBOS1A0A0B4J2F0 54 aa19.76■□□□□ 0.75
CDKN2A-201ENST00000304494 IGHV7-4-1A0A0J9YVY3 117 aa19.76■□□□□ 0.75
CDKN2A-201ENST00000304494 SCGB2A1O75556 95 aa19.76■□□□□ 0.75
CDKN2A-201ENST00000304494 SRPXP78539 464 aa19.76■□□□□ 0.75
CDKN2A-201ENST00000304494 ZNF79Q15937 498 aa19.76■□□□□ 0.75
CDKN2A-201ENST00000304494 OR4C46A6NHA9 309 aa19.75■□□□□ 0.75
CDKN2A-201ENST00000304494 SULT1A3P0DMM9 295 aa19.75■□□□□ 0.75
CDKN2A-201ENST00000304494 SULT1A4P0DMN0 295 aa19.75■□□□□ 0.75
CDKN2A-201ENST00000304494 SPANXN2Q5MJ10 180 aa19.75■□□□□ 0.75
CDKN2A-201ENST00000304494 ZNF600Q6ZNG1 722 aa19.75■□□□□ 0.75
CDKN2A-201ENST00000304494 RHPN1-AS1Q9BWJ2 59 aa19.75■□□□□ 0.75
CDKN2A-201ENST00000304494 A0A0B4J2A0 478 aa19.74■□□□□ 0.75
CDKN2A-201ENST00000304494 RPS10-NUDT3A0A1W2PQS6 291 aa19.74■□□□□ 0.75
CDKN2A-201ENST00000304494 CEBPZOSA8MTT3 80 aa19.74■□□□□ 0.75
CDKN2A-201ENST00000304494 CHEK1O14757 476 aa19.74■□□□□ 0.75
CDKN2A-201ENST00000304494 TMEM50AO95807 157 aa19.74■□□□□ 0.75
CDKN2A-201ENST00000304494 BMI1P35226 326 aa19.74■□□□□ 0.75
CDKN2A-201ENST00000304494 SUPT4H1P63272 117 aaKnown RBP19.74■□□□□ 0.75
CDKN2A-201ENST00000304494 LGI3Q8N145 548 aa19.74■□□□□ 0.75
CDKN2A-201ENST00000304494 EDA2RQ9HAV5 297 aa19.74■□□□□ 0.75
CDKN2A-201ENST00000304494 PRR13Q9NZ81 148 aa19.74■□□□□ 0.75
CDKN2A-201ENST00000304494 SHPKQ9UHJ6 478 aa19.74■□□□□ 0.75
CDKN2A-201ENST00000304494 LYL1P12980 280 aa19.73■□□□□ 0.75
CDKN2A-201ENST00000304494 CCR6P51684 374 aa19.73■□□□□ 0.75
CDKN2A-201ENST00000304494 TOMM20LQ6UXN7 152 aa19.73■□□□□ 0.75
CDKN2A-201ENST00000304494 OR4X1Q8NH49 305 aa19.73■□□□□ 0.75
CDKN2A-201ENST00000304494 RNF2Q99496 336 aa19.73■□□□□ 0.75
CDKN2A-201ENST00000304494 SLC25A21Q9BQT8 299 aaPredicted RBP19.73■□□□□ 0.75
CDKN2A-201ENST00000304494 GGTLC1Q9BX51 225 aa19.73■□□□□ 0.75
CDKN2A-201ENST00000304494 FNDC4Q9H6D8 234 aaPredicted RBP19.73■□□□□ 0.75
CDKN2A-201ENST00000304494 LOC102724200A0A096LPH7 203 aaPredicted RBP19.72■□□□□ 0.75
CDKN2A-201ENST00000304494 CLN5O75503 358 aa19.72■□□□□ 0.75
CDKN2A-201ENST00000304494 C2orf83Q53S99 150 aa19.72■□□□□ 0.75
CDKN2A-201ENST00000304494 TMEM128Q5BJH2 165 aa19.72■□□□□ 0.75
CDKN2A-201ENST00000304494 NMSQ5H8A3 153 aa19.72■□□□□ 0.75
CDKN2A-201ENST00000304494 TMED4Q7Z7H5 227 aa19.72■□□□□ 0.75
CDKN2A-201ENST00000304494 SLC24A4Q8NFF2 622 aa19.72■□□□□ 0.75
CDKN2A-201ENST00000304494 PUS1Q9Y606 427 aaKnown RBP eCLIP19.72■□□□□ 0.75
CDKN2A-201ENST00000304494 CD5P06127 495 aa19.71■□□□□ 0.75
CDKN2A-201ENST00000304494 SMCO1Q147U7 214 aa19.71■□□□□ 0.75
CDKN2A-201ENST00000304494 CASC10Q5T4H9 136 aa19.71■□□□□ 0.75
CDKN2A-201ENST00000304494 LYZL2Q7Z4W2 148 aa19.71■□□□□ 0.75
CDKN2A-201ENST00000304494 NOXA1Q86UR1 476 aa19.71■□□□□ 0.75
CDKN2A-201ENST00000304494 RNASEH2CQ8TDP1 164 aaKnown RBP19.71■□□□□ 0.75
CDKN2A-201ENST00000304494 FAM110AQ9BQ89 295 aa19.71■□□□□ 0.75
CDKN2A-201ENST00000304494 RETNQ9HD89 108 aa19.71■□□□□ 0.75
CDKN2A-201ENST00000304494 TRAV30A0A087WSZ9 112 aa19.7■□□□□ 0.74
CDKN2A-201ENST00000304494 IGHV3-49A0A0A0MS15 119 aa19.7■□□□□ 0.74
CDKN2A-201ENST00000304494 UBQLN2Q9UHD9 624 aa19.7■□□□□ 0.74
CDKN2A-201ENST00000304494 DUXBA0A1W2PPF3 345 aa19.69■□□□□ 0.74
CDKN2A-201ENST00000304494 NXPH3O95157 252 aa19.69■□□□□ 0.74
CDKN2A-201ENST00000304494 TNFRSF9Q07011 255 aa19.69■□□□□ 0.74
CDKN2A-201ENST00000304494 MLANAQ16655 118 aa19.69■□□□□ 0.74
CDKN2A-201ENST00000304494 ZFAND3Q9H8U3 227 aa19.69■□□□□ 0.74
CDKN2A-201ENST00000304494 MRPL36Q9P0J6 103 aaKnown RBP19.69■□□□□ 0.74
CDKN2A-201ENST00000304494 HSPB7Q9UBY9 170 aa19.69■□□□□ 0.74
CDKN2A-201ENST00000304494 SLC25A4P12235 298 aa19.68■□□□□ 0.74
CDKN2A-201ENST00000304494 NPY1RP25929 384 aa19.68■□□□□ 0.74
CDKN2A-201ENST00000304494 SRRQ9GZT4 340 aa19.68■□□□□ 0.74
CDKN2A-201ENST00000304494 A0A1B0GU03 582 aa19.67■□□□□ 0.74
CDKN2A-201ENST00000304494 INPP1P49441 399 aa19.67■□□□□ 0.74
CDKN2A-201ENST00000304494 CMC4P56277 68 aaPredicted RBP19.67■□□□□ 0.74
CDKN2A-201ENST00000304494 PAFAH1B2P68402 229 aa19.67■□□□□ 0.74
CDKN2A-201ENST00000304494 ODF3L2Q3SX64 289 aa19.67■□□□□ 0.74
CDKN2A-201ENST00000304494 ETFRF1Q6IPR1 90 aa19.67■□□□□ 0.74
CDKN2A-201ENST00000304494 TMEM231Q9H6L2 316 aa19.67■□□□□ 0.74
CDKN2A-201ENST00000304494 IGHV3OR16-13A0A075B7E8 117 aa19.66■□□□□ 0.74
CDKN2A-201ENST00000304494 IGHV3-74A0A0B4J1X5 117 aa19.66■□□□□ 0.74
CDKN2A-201ENST00000304494 VAMP1P23763 118 aa19.66■□□□□ 0.74
CDKN2A-201ENST00000304494 APOC4P55056 127 aa19.66■□□□□ 0.74
CDKN2A-201ENST00000304494 FAM90A2PQ658T7 463 aa19.66■□□□□ 0.74
CDKN2A-201ENST00000304494 DTD1Q8TEA8 209 aa19.66■□□□□ 0.74
CDKN2A-201ENST00000304494 VSIRQ9H7M9 311 aa19.66■□□□□ 0.74
CDKN2A-201ENST00000304494 U3KQ87 197 aa19.66■□□□□ 0.74
CDKN2A-201ENST00000304494 NBEAL2Q6ZNJ1 2754 aa19.66■□□□□ 0.74
CDKN2A-201ENST00000304494 IFNA10P01566 189 aa19.65■□□□□ 0.74
CDKN2A-201ENST00000304494 NPPCP23582 126 aa19.65■□□□□ 0.74
CDKN2A-201ENST00000304494 TRIQKQ629K1 86 aa19.65■□□□□ 0.74
CDKN2A-201ENST00000304494 TCF24Q7RTU0 167 aa19.65■□□□□ 0.74
CDKN2A-201ENST00000304494 LRTM2Q8N967 370 aa19.65■□□□□ 0.74
CDKN2A-201ENST00000304494 OR1S2Q8NGQ3 325 aa19.65■□□□□ 0.74
CDKN2A-201ENST00000304494 OR1S1Q8NH92 325 aa19.65■□□□□ 0.74
CDKN2A-201ENST00000304494 ST8SIA2Q92186 375 aa19.65■□□□□ 0.74
CDKN2A-201ENST00000304494 RBMS2Q15434 407 aaKnown RBP19.64■□□□□ 0.73
CDKN2A-201ENST00000304494 PRSS54Q6PEW0 395 aa19.64■□□□□ 0.73
CDKN2A-201ENST00000304494 CENPSQ8N2Z9 138 aa19.64■□□□□ 0.73
CDKN2A-201ENST00000304494 TMEM170AQ8WVE7 144 aa19.64■□□□□ 0.73
CDKN2A-201ENST00000304494 METTL26Q96S19 204 aa19.64■□□□□ 0.73
CDKN2A-201ENST00000304494 RBKSQ9H477 322 aa19.64■□□□□ 0.73
CDKN2A-201ENST00000304494 IGKV3-7A0A075B6H7 116 aa19.63■□□□□ 0.73
CDKN2A-201ENST00000304494 A0A1W2PS18 150 aa19.63■□□□□ 0.73
CDKN2A-201ENST00000304494 IGKV1-17P01599 117 aa19.63■□□□□ 0.73
CDKN2A-201ENST00000304494 APOHP02749 345 aaPredicted RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms