RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 THAP6Q8TBB0 222 aa7.32□□□□□ -1.24
RFX3-201ENST00000302303 DCUN1D4Q92564 292 aa7.32□□□□□ -1.24
RFX3-201ENST00000302303 PINX1Q96BK5 328 aaKnown RBP7.32□□□□□ -1.24
RFX3-201ENST00000302303 ZNF747Q9BV97 191 aa7.32□□□□□ -1.24
RFX3-201ENST00000302303 WFDC1Q9HC57 220 aa7.32□□□□□ -1.24
RFX3-201ENST00000302303 VWFP04275 2813 aa7.31□□□□□ -1.24
RFX3-201ENST00000302303 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.31□□□□□ -1.24
RFX3-201ENST00000302303 HMSDA8MTL9 139 aa7.31□□□□□ -1.24
RFX3-201ENST00000302303 CORTO00230 105 aa7.31□□□□□ -1.24
RFX3-201ENST00000302303 IFNA4P05014 189 aa7.31□□□□□ -1.24
RFX3-201ENST00000302303 CTSGP08311 255 aa7.31□□□□□ -1.24
RFX3-201ENST00000302303 OR8U8P0C7N1 319 aa7.31□□□□□ -1.24
RFX3-201ENST00000302303 PET100P0DJ07 73 aa7.31□□□□□ -1.24
RFX3-201ENST00000302303 CXCL2P19875 107 aa7.31□□□□□ -1.24
RFX3-201ENST00000302303 ADMP35318 185 aa7.31□□□□□ -1.24
RFX3-201ENST00000302303 RAB11AP62491 216 aa7.31□□□□□ -1.24
RFX3-201ENST00000302303 RPP30P78346 268 aaKnown RBP7.31□□□□□ -1.24
RFX3-201ENST00000302303 RUNX1Q01196 453 aa7.31□□□□□ -1.24
RFX3-201ENST00000302303 ATP5G2Q06055 141 aa7.31□□□□□ -1.24
RFX3-201ENST00000302303 EXOSC2Q13868 293 aaKnown RBP7.31□□□□□ -1.24
RFX3-201ENST00000302303 VWC2Q2TAL6 325 aa7.31□□□□□ -1.24
RFX3-201ENST00000302303 OR8G2PQ6IF36 304 aa7.31□□□□□ -1.24
RFX3-201ENST00000302303 OR4X2Q8NGF9 303 aa7.31□□□□□ -1.24
RFX3-201ENST00000302303 OR4X1Q8NH49 305 aa7.31□□□□□ -1.24
RFX3-201ENST00000302303 CACNG8Q8WXS5 425 aa7.31□□□□□ -1.24
RFX3-201ENST00000302303 OR5B12Q96R08 314 aa7.31□□□□□ -1.24
RFX3-201ENST00000302303 HSPB11Q9Y547 144 aa7.31□□□□□ -1.24
RFX3-201ENST00000302303 STAB1Q9NY15 2570 aa7.3□□□□□ -1.24
RFX3-201ENST00000302303 ANK2Q01484 3957 aa7.3□□□□□ -1.24
RFX3-201ENST00000302303 FXYD6-FXYD2A0A087WZ82 144 aa7.3□□□□□ -1.24
RFX3-201ENST00000302303 TCRBV4S1A1TA0A5B7 111 aa7.3□□□□□ -1.24
RFX3-201ENST00000302303 IGKV1-17P01599 117 aa7.3□□□□□ -1.24
RFX3-201ENST00000302303 OPRK1P41145 380 aa7.3□□□□□ -1.24
RFX3-201ENST00000302303 DLK1P80370 383 aa7.3□□□□□ -1.24
RFX3-201ENST00000302303 LGALSLQ3ZCW2 172 aaPredicted RBP7.3□□□□□ -1.24
RFX3-201ENST00000302303 C4orf48Q5BLP8 95 aa7.3□□□□□ -1.24
RFX3-201ENST00000302303 LAMTOR1Q6IAA8 161 aa7.3□□□□□ -1.24
RFX3-201ENST00000302303 ACOT7LQ6ZUV0 252 aa7.3□□□□□ -1.24
RFX3-201ENST00000302303 SLC16A13Q7RTY0 426 aa7.3□□□□□ -1.24
RFX3-201ENST00000302303 NOXA1Q86UR1 476 aa7.3□□□□□ -1.24
RFX3-201ENST00000302303 TMEM217Q8N7C4 229 aa7.3□□□□□ -1.24
RFX3-201ENST00000302303 OR10P1Q8NGE3 313 aa7.3□□□□□ -1.24
RFX3-201ENST00000302303 NPIPB3Q92617 1050 aa7.3□□□□□ -1.24
RFX3-201ENST00000302303 CXorf58Q96LI9 332 aa7.3□□□□□ -1.24
RFX3-201ENST00000302303 CHRDL1Q9BU40 450 aa7.3□□□□□ -1.24
RFX3-201ENST00000302303 C21orf62Q9NYP8 219 aa7.3□□□□□ -1.24
RFX3-201ENST00000302303 THYN1Q9P016 225 aa7.3□□□□□ -1.24
RFX3-201ENST00000302303 PAIP2BQ9ULR5 123 aaKnown RBP7.3□□□□□ -1.24
RFX3-201ENST00000302303 LSM4Q9Y4Z0 139 aaKnown RBP7.3□□□□□ -1.24
RFX3-201ENST00000302303 TSSC4Q9Y5U2 329 aaPredicted RBP7.3□□□□□ -1.24
RFX3-201ENST00000302303 TRRAPQ9Y4A5 3859 aa7.29□□□□□ -1.24
RFX3-201ENST00000302303 TRBV7-1A0A0A6YYK4 115 aa7.29□□□□□ -1.24
RFX3-201ENST00000302303 A0A0G2JLM5 398 aa7.29□□□□□ -1.24
RFX3-201ENST00000302303 FNDC10F2Z333 226 aa7.29□□□□□ -1.24
RFX3-201ENST00000302303 BMPR1BO00238 502 aa7.29□□□□□ -1.24
RFX3-201ENST00000302303 CLN5O75503 358 aa7.29□□□□□ -1.24
RFX3-201ENST00000302303 CLEC3BP05452 202 aa7.29□□□□□ -1.24
RFX3-201ENST00000302303 LGALS1P09382 135 aaKnown RBP7.29□□□□□ -1.24
RFX3-201ENST00000302303 IGLC1P0CG04 106 aa7.29□□□□□ -1.24
RFX3-201ENST00000302303 S100A11P31949 105 aa7.29□□□□□ -1.24
RFX3-201ENST00000302303 RND2P52198 227 aa7.29□□□□□ -1.24
RFX3-201ENST00000302303 SLC38A11Q08AI6 406 aa7.29□□□□□ -1.24
RFX3-201ENST00000302303 DEFB136Q30KP8 78 aa7.29□□□□□ -1.24
RFX3-201ENST00000302303 KRTAP21-3Q3LHN1 58 aa7.29□□□□□ -1.24
RFX3-201ENST00000302303 TREML4Q6UXN2 200 aa7.29□□□□□ -1.24
RFX3-201ENST00000302303 CLEC19AQ6UXS0 136 aa7.29□□□□□ -1.24
RFX3-201ENST00000302303 TMEM182Q6ZP80 229 aaPredicted RBP7.29□□□□□ -1.24
RFX3-201ENST00000302303 C8orf86Q6ZUL3 223 aa7.29□□□□□ -1.24
RFX3-201ENST00000302303 NDUFA11Q86Y39 141 aa7.29□□□□□ -1.24
RFX3-201ENST00000302303 THAP8Q8NA92 274 aa7.29□□□□□ -1.24
RFX3-201ENST00000302303 OR5C1Q8NGR4 320 aa7.29□□□□□ -1.24
RFX3-201ENST00000302303 SPATA3Q8NHX4 192 aa7.29□□□□□ -1.24
RFX3-201ENST00000302303 C4orf3Q8WVX3 66 aa7.29□□□□□ -1.24
RFX3-201ENST00000302303 DUX3Q96PT4 197 aa7.29□□□□□ -1.24
RFX3-201ENST00000302303 ATP6V0BQ99437 205 aa7.29□□□□□ -1.24
RFX3-201ENST00000302303 TXN2Q99757 166 aa7.29□□□□□ -1.24
RFX3-201ENST00000302303 SLC25A31Q9H0C2 315 aa7.29□□□□□ -1.24
RFX3-201ENST00000302303 CYTL1Q9NRR1 136 aa7.29□□□□□ -1.24
RFX3-201ENST00000302303 IGHV4OR15-8A0A075B7B6 117 aa7.28□□□□□ -1.24
RFX3-201ENST00000302303 A0A087WW49 117 aa7.28□□□□□ -1.24
RFX3-201ENST00000302303 A0A1W2PRX2 142 aa7.28□□□□□ -1.24
RFX3-201ENST00000302303 ANKRD34BA5PLL1 514 aa7.28□□□□□ -1.24
RFX3-201ENST00000302303 OR2T8A6NH00 312 aa7.28□□□□□ -1.24
RFX3-201ENST00000302303 PPP5D1E7EU14 171 aa7.28□□□□□ -1.24
RFX3-201ENST00000302303 ARPC5O15511 151 aa7.28□□□□□ -1.24
RFX3-201ENST00000302303 CYB5BO43169 146 aa7.28□□□□□ -1.24
RFX3-201ENST00000302303 MFAP4P55083 255 aa7.28□□□□□ -1.24
RFX3-201ENST00000302303 BAXQ07812 192 aa7.28□□□□□ -1.24
RFX3-201ENST00000302303 FHL3Q13643 280 aa7.28□□□□□ -1.24
RFX3-201ENST00000302303 TMEM144Q7Z5S9 345 aa7.28□□□□□ -1.24
RFX3-201ENST00000302303 EEF1AKMT3Q96AZ1 226 aa7.28□□□□□ -1.24
RFX3-201ENST00000302303 RAX2Q96IS3 184 aa7.28□□□□□ -1.24
RFX3-201ENST00000302303 GGACTQ9BVM4 153 aa7.28□□□□□ -1.24
RFX3-201ENST00000302303 ZC4H2Q9NQZ6 224 aa7.28□□□□□ -1.24
RFX3-201ENST00000302303 PEF1Q9UBV8 284 aaKnown RBP7.28□□□□□ -1.24
RFX3-201ENST00000302303 WDR83OSQ9Y284 106 aa7.28□□□□□ -1.24
RFX3-201ENST00000302303 DNHD1Q96M86 4753 aa7.28□□□□□ -1.24
RFX3-201ENST00000302303 GPR183P32249 361 aa7.27□□□□□ -1.25
RFX3-201ENST00000302303 EIF2B2P49770 351 aaKnown RBP7.27□□□□□ -1.25
RFX3-201ENST00000302303 ZNF90Q03938 601 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms