RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 ZCCHC14Q8WYQ9 949 aaKnown RBP11.61□□□□□ -0.55
SDC2-201ENST00000302190 ST6GALNAC6Q969X2 333 aa11.61□□□□□ -0.55
SDC2-201ENST00000302190 RPEQ96AT9 228 aa11.61□□□□□ -0.55
SDC2-201ENST00000302190 COL27A1Q8IZC6 1860 aaPredicted RBP11.61□□□□□ -0.55
SDC2-201ENST00000302190 MUC21A0A0G2JKD1 596 aa11.61□□□□□ -0.55
SDC2-201ENST00000302190 MUC21A0A140T8X8 626 aa11.61□□□□□ -0.55
SDC2-201ENST00000302190 MUC21Q5SSG8 566 aa11.61□□□□□ -0.55
SDC2-201ENST00000302190 GBGT1Q8N5D6 347 aa11.61□□□□□ -0.55
SDC2-201ENST00000302190 ADTRPQ96IZ2 230 aa11.61□□□□□ -0.55
SDC2-201ENST00000302190 AMMECR1Q9Y4X0 333 aaPredicted RBP11.61□□□□□ -0.55
SDC2-201ENST00000302190 NCKAP5O14513 1909 aa11.6□□□□□ -0.55
SDC2-201ENST00000302190 IGHV3OR16-8A0A075B7F1 116 aa11.6□□□□□ -0.55
SDC2-201ENST00000302190 Q6ZR03 302 aa11.6□□□□□ -0.55
SDC2-201ENST00000302190 MGST2Q99735 147 aa11.6□□□□□ -0.55
SDC2-201ENST00000302190 COL8A1P27658 744 aa11.6□□□□□ -0.55
SDC2-201ENST00000302190 KIR2DS2P43631 304 aa11.6□□□□□ -0.55
SDC2-201ENST00000302190 MMDQ15546 238 aa11.6□□□□□ -0.55
SDC2-201ENST00000302190 GCSAMQ8N6F7 178 aa11.6□□□□□ -0.55
SDC2-201ENST00000302190 GNB4Q9HAV0 340 aa11.6□□□□□ -0.55
SDC2-201ENST00000302190 NGBQ9NPG2 151 aa11.6□□□□□ -0.55
SDC2-201ENST00000302190 NAV3Q8IVL0 2385 aa11.6□□□□□ -0.55
SDC2-201ENST00000302190 VENTXO95231 258 aa11.59□□□□□ -0.55
SDC2-201ENST00000302190 PFN1P07737 140 aaKnown RBP11.59□□□□□ -0.55
SDC2-201ENST00000302190 GNG5P63218 68 aa11.59□□□□□ -0.55
SDC2-201ENST00000302190 ZNF596Q8TC21 504 aa11.59□□□□□ -0.55
SDC2-201ENST00000302190 BET1LQ9NYM9 111 aa11.59□□□□□ -0.55
SDC2-201ENST00000302190 HILPDAQ9Y5L2 63 aa11.59□□□□□ -0.55
SDC2-201ENST00000302190 PTPN13Q12923 2485 aa11.59□□□□□ -0.55
SDC2-201ENST00000302190 IGKV1-16P04430 117 aa11.59□□□□□ -0.55
SDC2-201ENST00000302190 TBL2Q9Y4P3 447 aaKnown RBP11.59□□□□□ -0.55
SDC2-201ENST00000302190 YTHDF2Q9Y5A9 579 aaKnown RBP11.59□□□□□ -0.55
SDC2-201ENST00000302190 INSIG2Q9Y5U4 225 aa11.59□□□□□ -0.55
SDC2-201ENST00000302190 SELENOKQ9Y6D0 94 aa11.59□□□□□ -0.55
SDC2-201ENST00000302190 TNRC6AQ8NDV7 1962 aaKnown RBP11.59□□□□□ -0.55
SDC2-201ENST00000302190 TANC2Q9HCD6 1990 aa11.59□□□□□ -0.55
SDC2-201ENST00000302190 IGKV1D-17A0A075B6S4 117 aa11.59□□□□□ -0.55
SDC2-201ENST00000302190 LYNX1G3V0Z9 82 aa11.59□□□□□ -0.55
SDC2-201ENST00000302190 LYNX1P0DP58 116 aa11.59□□□□□ -0.55
SDC2-201ENST00000302190 Q6ZS49 121 aa11.59□□□□□ -0.55
SDC2-201ENST00000302190 ZNF738Q8NE65 137 aa11.59□□□□□ -0.55
SDC2-201ENST00000302190 NUDT10Q8NFP7 164 aa11.59□□□□□ -0.55
SDC2-201ENST00000302190 AGMATQ9BSE5 352 aa11.59□□□□□ -0.55
SDC2-201ENST00000302190 MRPL20Q9BYC9 149 aaKnown RBP11.59□□□□□ -0.55
SDC2-201ENST00000302190 TMEM242Q9NWH2 141 aa11.59□□□□□ -0.55
SDC2-201ENST00000302190 CCL25O15444 150 aa11.58□□□□□ -0.55
SDC2-201ENST00000302190 RBFOX2O43251 390 aaKnown RBP eCLIP11.58□□□□□ -0.553e-8■■■□□ 17.9
SDC2-201ENST00000302190 C8orf88P0DMB2 117 aa11.58□□□□□ -0.55
SDC2-201ENST00000302190 CD24P25063 80 aa11.58□□□□□ -0.55
SDC2-201ENST00000302190 HTR1DP28221 377 aa11.58□□□□□ -0.55
SDC2-201ENST00000302190 SPATA45Q537H7 98 aa11.58□□□□□ -0.55
SDC2-201ENST00000302190 EAF1Q96JC9 268 aaPredicted RBP11.58□□□□□ -0.55
SDC2-201ENST00000302190 ZNF714Q96N38 554 aa11.58□□□□□ -0.55
SDC2-201ENST00000302190 PPIAL4EA0A075B759 164 aa11.58□□□□□ -0.56
SDC2-201ENST00000302190 PPIAL4DF5H284 164 aa11.58□□□□□ -0.56
SDC2-201ENST00000302190 CT45A10P0DMU9 189 aa11.58□□□□□ -0.56
SDC2-201ENST00000302190 PPIAL4FP0DN26 164 aa11.58□□□□□ -0.56
SDC2-201ENST00000302190 LGALS4P56470 323 aa11.58□□□□□ -0.56
SDC2-201ENST00000302190 PRNTQ86SH4 94 aa11.58□□□□□ -0.56
SDC2-201ENST00000302190 PGLYRP4Q96LB8 373 aa11.58□□□□□ -0.56
SDC2-201ENST00000302190 RNF2Q99496 336 aa11.58□□□□□ -0.56
SDC2-201ENST00000302190 MBNL3Q9NUK0 354 aaKnown RBP11.58□□□□□ -0.56
SDC2-201ENST00000302190 IDI2-AS1Q9NZ38 188 aa11.58□□□□□ -0.56
SDC2-201ENST00000302190 C16orf97H3BN30 126 aa11.58□□□□□ -0.56
SDC2-201ENST00000302190 FAM90A1Q86YD7 464 aa11.58□□□□□ -0.56
SDC2-201ENST00000302190 ODF3L1Q8IXM7 274 aa11.58□□□□□ -0.56
SDC2-201ENST00000302190 KLHDC1Q8N7A1 406 aa11.58□□□□□ -0.56
SDC2-201ENST00000302190 KBTBD11-OT1A0A1B0GTJ5 212 aa11.57□□□□□ -0.56
SDC2-201ENST00000302190 AHRRA9YTQ3 701 aa11.57□□□□□ -0.56
SDC2-201ENST00000302190 SAA1P0DJI8 122 aaPredicted RBP11.57□□□□□ -0.56
SDC2-201ENST00000302190 WDR73Q6P4I2 378 aa11.57□□□□□ -0.56
SDC2-201ENST00000302190 MDS2Q8NDY4 140 aa11.57□□□□□ -0.56
SDC2-201ENST00000302190 SPRY4Q9C004 299 aa11.57□□□□□ -0.56
SDC2-201ENST00000302190 PTPRBP23467 1997 aa11.57□□□□□ -0.56
SDC2-201ENST00000302190 P01737 135 aa11.57□□□□□ -0.56
SDC2-201ENST00000302190 TCTEX1D1Q8N7M0 179 aa11.57□□□□□ -0.56
SDC2-201ENST00000302190 TNFRSF19Q9NS68 423 aa11.57□□□□□ -0.56
SDC2-201ENST00000302190 KIR2DL5BA0A0G2JN68 375 aa11.57□□□□□ -0.56
SDC2-201ENST00000302190 KIR2DL5BA0A0G2JPC4 375 aa11.57□□□□□ -0.56
SDC2-201ENST00000302190 C1orf185Q5T7R7 199 aa11.57□□□□□ -0.56
SDC2-201ENST00000302190 KIR2DL5AQ8N109 375 aa11.57□□□□□ -0.56
SDC2-201ENST00000302190 NUDT11Q96G61 164 aa11.57□□□□□ -0.56
SDC2-201ENST00000302190 ASCL2Q99929 193 aa11.57□□□□□ -0.56
SDC2-201ENST00000302190 PMCHL2Q9BQD1 86 aa11.57□□□□□ -0.56
SDC2-201ENST00000302190 SCNM1Q9BWG6 230 aa11.57□□□□□ -0.56
SDC2-201ENST00000302190 HIF1ANQ9NWT6 349 aa11.57□□□□□ -0.56
SDC2-201ENST00000302190 LOC389332A0A1B0GUA5 103 aa11.56□□□□□ -0.56
SDC2-201ENST00000302190 A0A1W2PN81 502 aa11.56□□□□□ -0.56
SDC2-201ENST00000302190 GLRXP35754 106 aa11.56□□□□□ -0.56
SDC2-201ENST00000302190 ZNF134P52741 427 aa11.56□□□□□ -0.56
SDC2-201ENST00000302190 SSX8Q7RTT4 187 aa11.56□□□□□ -0.56
SDC2-201ENST00000302190 TMEM106BQ9NUM4 274 aa11.56□□□□□ -0.56
SDC2-201ENST00000302190 IL36BQ9NZH7 164 aa11.56□□□□□ -0.56
SDC2-201ENST00000302190 EXPH5Q8NEV8 1989 aa11.56□□□□□ -0.56
SDC2-201ENST00000302190 LCN2P80188 198 aa11.56□□□□□ -0.56
SDC2-201ENST00000302190 MUC15Q8N387 334 aa11.56□□□□□ -0.56
SDC2-201ENST00000302190 WASHC3Q9Y3C0 194 aa11.56□□□□□ -0.56
SDC2-201ENST00000302190 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.56□□□□□ -0.56
SDC2-201ENST00000302190 SNAI2O43623 268 aa11.56□□□□□ -0.56
SDC2-201ENST00000302190 SELENOTP62341 195 aa11.56□□□□□ -0.56
SDC2-201ENST00000302190 SRSF7Q16629 238 aaKnown RBP eCLIP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms