RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 ZNF497Q6ZNH5 498 aa11.29□□□□□ -0.6
CHRFAM7A-201ENST00000299847 C1orf162Q8NEQ5 155 aaPredicted RBP11.29□□□□□ -0.6
CHRFAM7A-201ENST00000299847 OTORQ9NRC9 128 aa11.29□□□□□ -0.6
CHRFAM7A-201ENST00000299847 PEMTQ9UBM1 199 aa11.29□□□□□ -0.6
CHRFAM7A-201ENST00000299847 IMMP1LQ96LU5 166 aa11.29□□□□□ -0.6
CHRFAM7A-201ENST00000299847 NHP2Q9NX24 153 aaKnown RBP11.29□□□□□ -0.6
CHRFAM7A-201ENST00000299847 DMRTC2Q8IXT2 367 aaPredicted RBP11.29□□□□□ -0.6
CHRFAM7A-201ENST00000299847 SLC25A28Q96A46 364 aa11.29□□□□□ -0.6
CHRFAM7A-201ENST00000299847 COQ2Q96H96 371 aa11.29□□□□□ -0.6
CHRFAM7A-201ENST00000299847 PSME4Q14997 1843 aa11.29□□□□□ -0.6
CHRFAM7A-201ENST00000299847 C15orf61A6NNL5 157 aa11.29□□□□□ -0.6
CHRFAM7A-201ENST00000299847 ZNF815PA8K554 130 aa11.29□□□□□ -0.6
CHRFAM7A-201ENST00000299847 ZNF257Q9Y2Q1 563 aa11.29□□□□□ -0.6
CHRFAM7A-201ENST00000299847 RFNGQ9Y644 331 aa11.29□□□□□ -0.6
CHRFAM7A-201ENST00000299847 SPATA31B1PQ5VZV4 182 aa11.29□□□□□ -0.6
CHRFAM7A-201ENST00000299847 NRN1Q9NPD7 142 aa11.29□□□□□ -0.6
CHRFAM7A-201ENST00000299847 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.28□□□□□ -0.6
CHRFAM7A-201ENST00000299847 THBDP07204 575 aa11.28□□□□□ -0.6
CHRFAM7A-201ENST00000299847 C10orf55Q5SWW7 151 aa11.28□□□□□ -0.6
CHRFAM7A-201ENST00000299847 RNF125Q96EQ8 232 aa11.28□□□□□ -0.6
CHRFAM7A-201ENST00000299847 IFI6P09912 130 aa11.28□□□□□ -0.6
CHRFAM7A-201ENST00000299847 TRBV6-7A0A0A0MS04 114 aa11.28□□□□□ -0.6
CHRFAM7A-201ENST00000299847 NPIPB13A6NJU9 1138 aa11.28□□□□□ -0.6
CHRFAM7A-201ENST00000299847 TMEM133Q9H2Q1 129 aa11.28□□□□□ -0.6
CHRFAM7A-201ENST00000299847 VCX2Q9H322 139 aa11.28□□□□□ -0.6
CHRFAM7A-201ENST00000299847 ARID2Q68CP9 1835 aa11.28□□□□□ -0.6
CHRFAM7A-201ENST00000299847 Q5PR19 223 aa11.28□□□□□ -0.6
CHRFAM7A-201ENST00000299847 FAM89BQ8N5H3 189 aa11.28□□□□□ -0.6
CHRFAM7A-201ENST00000299847 CARHSP1Q9Y2V2 147 aaKnown RBP11.28□□□□□ -0.6
CHRFAM7A-201ENST00000299847 NRXN2Q9P2S2 1712 aa11.28□□□□□ -0.6
CHRFAM7A-201ENST00000299847 TRGV4A0A0C4DH28 118 aa11.28□□□□□ -0.6
CHRFAM7A-201ENST00000299847 RBMY1BA6NDE4 496 aaKnown RBP11.28□□□□□ -0.6
CHRFAM7A-201ENST00000299847 RBMY1EA6NEQ0 496 aaKnown RBP11.28□□□□□ -0.6
CHRFAM7A-201ENST00000299847 RBMY1DP0C7P1 496 aaKnown RBP11.28□□□□□ -0.6
CHRFAM7A-201ENST00000299847 RBMY1A1P0DJD3 496 aaKnown RBP11.28□□□□□ -0.6
CHRFAM7A-201ENST00000299847 RBMY1CP0DJD4 496 aa11.28□□□□□ -0.6
CHRFAM7A-201ENST00000299847 FOXL1Q12952 345 aa11.28□□□□□ -0.6
CHRFAM7A-201ENST00000299847 PSMG4Q5JS54 123 aa11.28□□□□□ -0.6
CHRFAM7A-201ENST00000299847 IGFL4Q6B9Z1 124 aa11.28□□□□□ -0.6
CHRFAM7A-201ENST00000299847 MYOD1P15172 320 aa11.27□□□□□ -0.6
CHRFAM7A-201ENST00000299847 PAX2Q02962 417 aa11.27□□□□□ -0.6
CHRFAM7A-201ENST00000299847 MRPL14Q6P1L8 145 aaKnown RBP11.27□□□□□ -0.6
CHRFAM7A-201ENST00000299847 TRAV8-2A0A0B4J237 113 aa11.27□□□□□ -0.61
CHRFAM7A-201ENST00000299847 FOXD3Q9UJU5 478 aaPredicted RBP11.27□□□□□ -0.61
CHRFAM7A-201ENST00000299847 A6NNC1 897 aa11.27□□□□□ -0.61
CHRFAM7A-201ENST00000299847 IGHV3-53P01767 116 aa11.27□□□□□ -0.61
CHRFAM7A-201ENST00000299847 CD28P10747 220 aa11.27□□□□□ -0.61
CHRFAM7A-201ENST00000299847 PAX1P15863 534 aa11.27□□□□□ -0.61
CHRFAM7A-201ENST00000299847 NDPQ00604 133 aa11.27□□□□□ -0.61
CHRFAM7A-201ENST00000299847 CIARTQ8N365 385 aaPredicted RBP11.27□□□□□ -0.61
CHRFAM7A-201ENST00000299847 DERL1Q9BUN8 251 aa11.27□□□□□ -0.61
CHRFAM7A-201ENST00000299847 EPDR1Q9UM22 224 aa11.27□□□□□ -0.61
CHRFAM7A-201ENST00000299847 ADAMTS7Q9UKP4 1686 aa11.27□□□□□ -0.61
CHRFAM7A-201ENST00000299847 TRAV21A0A0B4J279 112 aa11.27□□□□□ -0.61
CHRFAM7A-201ENST00000299847 NCR2O95944 276 aa11.27□□□□□ -0.61
CHRFAM7A-201ENST00000299847 SPAG8Q99932 426 aaPredicted RBP11.27□□□□□ -0.61
CHRFAM7A-201ENST00000299847 CEACAM1P13688 526 aa11.27□□□□□ -0.61
CHRFAM7A-201ENST00000299847 PAQR4Q8N4S7 273 aaPredicted RBP11.27□□□□□ -0.61
CHRFAM7A-201ENST00000299847 NPIPB5A8MRT5 1133 aa11.26□□□□□ -0.61
CHRFAM7A-201ENST00000299847 VMO1Q7Z5L0 202 aa11.26□□□□□ -0.61
CHRFAM7A-201ENST00000299847 NIT1Q86X76 327 aa11.26□□□□□ -0.61
CHRFAM7A-201ENST00000299847 NAA38Q9BRA0 125 aaKnown RBP11.26□□□□□ -0.61
CHRFAM7A-201ENST00000299847 J3QW42 95 aa11.26□□□□□ -0.61
CHRFAM7A-201ENST00000299847 CHTOPQ9Y3Y2 248 aaKnown RBP11.26□□□□□ -0.61
CHRFAM7A-201ENST00000299847 FABP5P3A8MUU1 101 aa11.26□□□□□ -0.61
CHRFAM7A-201ENST00000299847 EXOC3-AS1Q8N2X6 119 aa11.26□□□□□ -0.61
CHRFAM7A-201ENST00000299847 OCC1Q8TAD7 63 aa11.26□□□□□ -0.61
CHRFAM7A-201ENST00000299847 RNASE6Q93091 150 aaKnown RBP11.26□□□□□ -0.61
CHRFAM7A-201ENST00000299847 GFI1Q99684 422 aa11.26□□□□□ -0.61
CHRFAM7A-201ENST00000299847 PSG8Q9UQ74 426 aa11.26□□□□□ -0.61
CHRFAM7A-201ENST00000299847 IGHV1-46P01743 117 aa11.25□□□□□ -0.61
CHRFAM7A-201ENST00000299847 NEUROG1Q92886 237 aa11.25□□□□□ -0.61
CHRFAM7A-201ENST00000299847 MEGF9Q9H1U4 602 aa11.25□□□□□ -0.61
CHRFAM7A-201ENST00000299847 NAPSAO96009 420 aa11.25□□□□□ -0.61
CHRFAM7A-201ENST00000299847 IFI27P40305 119 aaPredicted RBP11.25□□□□□ -0.61
CHRFAM7A-201ENST00000299847 SRSF6Q13247 344 aaKnown RBP11.25□□□□□ -0.61
CHRFAM7A-201ENST00000299847 BRWD3Q6RI45 1802 aa11.25□□□□□ -0.61
CHRFAM7A-201ENST00000299847 RPL35AP18077 110 aaKnown RBP11.25□□□□□ -0.61
CHRFAM7A-201ENST00000299847 SEPSECSQ9HD40 501 aaKnown RBP11.25□□□□□ -0.61
CHRFAM7A-201ENST00000299847 SNRNP200O75643 2136 aaKnown RBP11.25□□□□□ -0.61
CHRFAM7A-201ENST00000299847 H0YIZ8 118 aa11.25□□□□□ -0.61
CHRFAM7A-201ENST00000299847 YPEL1O60688 119 aa11.25□□□□□ -0.61
CHRFAM7A-201ENST00000299847 EFNB3Q15768 340 aa11.25□□□□□ -0.61
CHRFAM7A-201ENST00000299847 BRD3OSQ6XYD6 125 aa11.25□□□□□ -0.61
CHRFAM7A-201ENST00000299847 YPEL2Q96QA6 119 aa11.25□□□□□ -0.61
CHRFAM7A-201ENST00000299847 NYNRINQ9P2P1 1898 aaKnown RBP11.25□□□□□ -0.61
CHRFAM7A-201ENST00000299847 LRRC37AA6NMS7 1700 aa11.25□□□□□ -0.61
CHRFAM7A-201ENST00000299847 LINC00205P59089 165 aa11.24□□□□□ -0.61
CHRFAM7A-201ENST00000299847 CD300EQ496F6 205 aaPredicted RBP11.24□□□□□ -0.61
CHRFAM7A-201ENST00000299847 LOC105371267A0A1B0GV96 52 aa11.24□□□□□ -0.61
CHRFAM7A-201ENST00000299847 SIGLEC15Q6ZMC9 328 aa11.24□□□□□ -0.61
CHRFAM7A-201ENST00000299847 CLDN16Q9Y5I7 305 aa11.24□□□□□ -0.61
CHRFAM7A-201ENST00000299847 LY6G6FQ5SQ64 297 aa11.24□□□□□ -0.61
CHRFAM7A-201ENST00000299847 TMEM144Q7Z5S9 345 aa11.24□□□□□ -0.61
CHRFAM7A-201ENST00000299847 HGFACQ04756 655 aa11.24□□□□□ -0.61
CHRFAM7A-201ENST00000299847 CRIM1Q9NZV1 1036 aa11.24□□□□□ -0.61
CHRFAM7A-201ENST00000299847 METRNQ9UJH8 293 aa11.24□□□□□ -0.61
CHRFAM7A-201ENST00000299847 LINC00587B1AMM8 73 aa11.24□□□□□ -0.61
CHRFAM7A-201ENST00000299847 ZNF474Q6S9Z5 364 aaPredicted RBP11.24□□□□□ -0.61
CHRFAM7A-201ENST00000299847 PRSS22Q9GZN4 317 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms