RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 NEUROG1Q92886 237 aa11.03□□□□□ -0.64
CTDP1-202ENST00000299543 AP1S3Q96PC3 154 aa11.03□□□□□ -0.64
CTDP1-202ENST00000299543 GNB4Q9HAV0 340 aa11.03□□□□□ -0.64
CTDP1-202ENST00000299543 KCNIP2Q9NS61 270 aa11.03□□□□□ -0.64
CTDP1-202ENST00000299543 VENTXO95231 258 aa11.02□□□□□ -0.64
CTDP1-202ENST00000299543 OPRK1P41145 380 aa11.02□□□□□ -0.64
CTDP1-202ENST00000299543 PSG5Q15238 335 aa11.02□□□□□ -0.64
CTDP1-202ENST00000299543 OR2D3Q8NGH3 330 aa11.02□□□□□ -0.64
CTDP1-202ENST00000299543 J3QR06 171 aa11.02□□□□□ -0.65
CTDP1-202ENST00000299543 EFNB3Q15768 340 aa11.02□□□□□ -0.65
CTDP1-202ENST00000299543 MIR17HGQ75NE6 70 aa11.02□□□□□ -0.65
CTDP1-202ENST00000299543 OR51B2Q9Y5P1 312 aa11.02□□□□□ -0.65
CTDP1-202ENST00000299543 CEP295Q9C0D2 2601 aa11.02□□□□□ -0.65
CTDP1-202ENST00000299543 GAGE12BA1L429 117 aa11.02□□□□□ -0.65
CTDP1-202ENST00000299543 IGKV1-16P04430 117 aa11.02□□□□□ -0.65
CTDP1-202ENST00000299543 C3orf79P0CE67 100 aa11.02□□□□□ -0.65
CTDP1-202ENST00000299543 GCHFRP30047 84 aa11.02□□□□□ -0.65
CTDP1-202ENST00000299543 SRIP30626 198 aa11.02□□□□□ -0.65
CTDP1-202ENST00000299543 HSPE1P61604 102 aaKnown RBP11.02□□□□□ -0.65
CTDP1-202ENST00000299543 FXYD3Q14802 87 aa11.02□□□□□ -0.65
CTDP1-202ENST00000299543 TMEM144Q7Z5S9 345 aa11.02□□□□□ -0.65
CTDP1-202ENST00000299543 FAM90A1Q86YD7 464 aa11.02□□□□□ -0.65
CTDP1-202ENST00000299543 AKAP13Q12802 2813 aa11.01□□□□□ -0.65
CTDP1-202ENST00000299543 MED13LQ71F56 2210 aa11.01□□□□□ -0.65
CTDP1-202ENST00000299543 HSBP1O75506 76 aa11.01□□□□□ -0.65
CTDP1-202ENST00000299543 STAG3L2P0CL84 134 aa11.01□□□□□ -0.65
CTDP1-202ENST00000299543 STAG3L3P0CL85 134 aa11.01□□□□□ -0.65
CTDP1-202ENST00000299543 LCN2P80188 198 aa11.01□□□□□ -0.65
CTDP1-202ENST00000299543 C22orf34Q6ZV56 151 aa11.01□□□□□ -0.65
CTDP1-202ENST00000299543 MPDU1O75352 247 aa11.01□□□□□ -0.65
CTDP1-202ENST00000299543 UQCRFS1P47985 274 aa11.01□□□□□ -0.65
CTDP1-202ENST00000299543 RHOBP62745 196 aa11.01□□□□□ -0.65
CTDP1-202ENST00000299543 C17orf58Q2M2W7 97 aa11.01□□□□□ -0.65
CTDP1-202ENST00000299543 MCRIP2Q9BUT9 160 aaKnown RBP11.01□□□□□ -0.65
CTDP1-202ENST00000299543 PLEKHA3Q9HB20 300 aa11.01□□□□□ -0.65
CTDP1-202ENST00000299543 RNF7Q9UBF6 113 aa11.01□□□□□ -0.65
CTDP1-202ENST00000299543 NAV3Q8IVL0 2385 aa11.01□□□□□ -0.65
CTDP1-202ENST00000299543 TECRQ9NZ01 308 aaKnown RBP11□□□□□ -0.65
CTDP1-202ENST00000299543 KBTBD11-OT1A0A1B0GTJ5 212 aa11□□□□□ -0.65
CTDP1-202ENST00000299543 C15orf61A6NNL5 157 aa11□□□□□ -0.65
CTDP1-202ENST00000299543 TOX4O94842 621 aa11□□□□□ -0.65
CTDP1-202ENST00000299543 GPX1P07203 203 aa11□□□□□ -0.65
CTDP1-202ENST00000299543 TIMP3P35625 211 aa11□□□□□ -0.65
CTDP1-202ENST00000299543 OR10W1Q8NGF6 305 aa11□□□□□ -0.65
CTDP1-202ENST00000299543 TACC2O95359 2948 aa11□□□□□ -0.65
CTDP1-202ENST00000299543 CRYBB3P26998 211 aa11□□□□□ -0.65
CTDP1-202ENST00000299543 GLRXP35754 106 aa11□□□□□ -0.65
CTDP1-202ENST00000299543 RNASEKQ6P5S7 137 aaKnown RBP11□□□□□ -0.65
CTDP1-202ENST00000299543 H1FXQ92522 213 aaKnown RBP11□□□□□ -0.65
CTDP1-202ENST00000299543 KALRNO60229 2985 aa11□□□□□ -0.65
CTDP1-202ENST00000299543 RPL24P83731 157 aaKnown RBP10.99□□□□□ -0.65
CTDP1-202ENST00000299543 DOLPP1Q86YN1 238 aa10.99□□□□□ -0.65
CTDP1-202ENST00000299543 IDI2-AS1Q9NZ38 188 aa10.99□□□□□ -0.65
CTDP1-202ENST00000299543 F2RL2O00254 374 aa10.99□□□□□ -0.65
CTDP1-202ENST00000299543 MUC21A0A0G2JKD1 596 aa10.98□□□□□ -0.65
CTDP1-202ENST00000299543 MUC21A0A140T8X8 626 aa10.98□□□□□ -0.65
CTDP1-202ENST00000299543 SRRM4A7MD48 611 aaKnown RBP10.98□□□□□ -0.65
CTDP1-202ENST00000299543 MT-CO2P00403 227 aa10.98□□□□□ -0.65
CTDP1-202ENST00000299543 FOXE3Q13461 319 aa10.98□□□□□ -0.65
CTDP1-202ENST00000299543 MUC21Q5SSG8 566 aa10.98□□□□□ -0.65
CTDP1-202ENST00000299543 NHLRC2Q8NBF2 726 aa10.98□□□□□ -0.65
CTDP1-202ENST00000299543 C1orf159Q96HA4 380 aa10.98□□□□□ -0.65
CTDP1-202ENST00000299543 NCOR1P1Q9H4R4 102 aa10.98□□□□□ -0.65
CTDP1-202ENST00000299543 K7EM74 188 aa10.98□□□□□ -0.65
CTDP1-202ENST00000299543 APELAP0DMC3 54 aa10.98□□□□□ -0.65
CTDP1-202ENST00000299543 CCL3L1P16619 93 aa10.98□□□□□ -0.65
CTDP1-202ENST00000299543 TIMM23BQ5SRD1 257 aa10.98□□□□□ -0.65
CTDP1-202ENST00000299543 OR9G1Q8NH87 305 aa10.98□□□□□ -0.65
CTDP1-202ENST00000299543 NABP2Q9BQ15 211 aa10.98□□□□□ -0.65
CTDP1-202ENST00000299543 FNDC4Q9H6D8 234 aaPredicted RBP10.98□□□□□ -0.65
CTDP1-202ENST00000299543 TRAV30A0A087WSZ9 112 aa10.97□□□□□ -0.65
CTDP1-202ENST00000299543 IGHV1-46P01743 117 aa10.97□□□□□ -0.65
CTDP1-202ENST00000299543 PRB3Q04118 309 aaPredicted RBP10.97□□□□□ -0.65
CTDP1-202ENST00000299543 SMAGPQ0VAQ4 97 aa10.97□□□□□ -0.65
CTDP1-202ENST00000299543 PQLC2Q6ZP29 291 aa10.97□□□□□ -0.65
CTDP1-202ENST00000299543 SPATA12Q7Z6I5 190 aa10.97□□□□□ -0.65
CTDP1-202ENST00000299543 KIR3DL3Q8N743 410 aa10.97□□□□□ -0.65
CTDP1-202ENST00000299543 RAB1CQ92928 201 aa10.97□□□□□ -0.65
CTDP1-202ENST00000299543 PMCHL2Q9BQD1 86 aa10.97□□□□□ -0.65
CTDP1-202ENST00000299543 IGLC7A0M8Q6 106 aa10.97□□□□□ -0.65
CTDP1-202ENST00000299543 M0R2Z0 102 aa10.97□□□□□ -0.65
CTDP1-202ENST00000299543 KIR2DS2P43631 304 aa10.97□□□□□ -0.65
CTDP1-202ENST00000299543 PRRX1P54821 245 aa10.97□□□□□ -0.65
CTDP1-202ENST00000299543 OR4F17Q8NGA8 305 aa10.97□□□□□ -0.65
CTDP1-202ENST00000299543 OR52E5Q8NH55 327 aa10.97□□□□□ -0.65
CTDP1-202ENST00000299543 CCL17Q92583 94 aa10.97□□□□□ -0.65
CTDP1-202ENST00000299543 CHRDL1Q9BU40 450 aa10.97□□□□□ -0.65
CTDP1-202ENST00000299543 CLEC7AQ9BXN2 247 aa10.97□□□□□ -0.65
CTDP1-202ENST00000299543 TLN1Q9Y490 2541 aaKnown RBP10.97□□□□□ -0.65
CTDP1-202ENST00000299543 A0A1W2PS18 150 aa10.97□□□□□ -0.65
CTDP1-202ENST00000299543 TAX1BP3O14907 124 aa10.97□□□□□ -0.65
CTDP1-202ENST00000299543 IGLL1P15814 213 aa10.97□□□□□ -0.65
CTDP1-202ENST00000299543 PMCHL1Q16048 86 aa10.97□□□□□ -0.65
CTDP1-202ENST00000299543 RTL8BQ17RB0 113 aa10.97□□□□□ -0.65
CTDP1-202ENST00000299543 SMIM12Q96EX1 92 aa10.97□□□□□ -0.65
CTDP1-202ENST00000299543 RNASE7Q9H1E1 156 aaKnown RBP10.97□□□□□ -0.65
CTDP1-202ENST00000299543 FAM215AQ9Y5M1 114 aa10.97□□□□□ -0.65
CTDP1-202ENST00000299543 HELTA6NFD8 242 aa10.96□□□□□ -0.65
CTDP1-202ENST00000299543 GAGE10A6NGK3 116 aa10.96□□□□□ -0.65
CTDP1-202ENST00000299543 K7EN84 100 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms