RNA–Protein interactions for RNA: ENST00000299492.8

PPFIBP2-201, Transcript of PPFIA binding protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPFIBP2, Length 3,557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP2-201ENST00000299492 SRIP30626 198 aa12.85□□□□□ -0.35
PPFIBP2-201ENST00000299492 VMA21Q3ZAQ7 101 aa12.85□□□□□ -0.35
PPFIBP2-201ENST00000299492 MORN5Q5VZ52 161 aa12.85□□□□□ -0.35
PPFIBP2-201ENST00000299492 ANAPC16Q96DE5 110 aa12.85□□□□□ -0.35
PPFIBP2-201ENST00000299492 GAFA1Q96PS6 74 aa12.85□□□□□ -0.35
PPFIBP2-201ENST00000299492 PAXXQ9BUH6 204 aa12.85□□□□□ -0.35
PPFIBP2-201ENST00000299492 MCRIP2Q9BUT9 160 aaKnown RBP12.85□□□□□ -0.35
PPFIBP2-201ENST00000299492 NGBQ9NPG2 151 aa12.85□□□□□ -0.35
PPFIBP2-201ENST00000299492 TRBV20OR9-2A0A075B6H5 130 aa12.84□□□□□ -0.35
PPFIBP2-201ENST00000299492 SERTM2A0A1B0GWG4 89 aa12.84□□□□□ -0.35
PPFIBP2-201ENST00000299492 NUPR1O60356 82 aa12.84□□□□□ -0.35
PPFIBP2-201ENST00000299492 IBA57Q5T440 356 aaKnown RBP12.84□□□□□ -0.35
PPFIBP2-201ENST00000299492 PNKDQ8N490 385 aa12.84□□□□□ -0.35
PPFIBP2-201ENST00000299492 CGB1A6NKQ9 187 aa12.84□□□□□ -0.35
PPFIBP2-201ENST00000299492 LOXL3P58215 753 aa12.84□□□□□ -0.35
PPFIBP2-201ENST00000299492 RPL19P84098 196 aaKnown RBP12.84□□□□□ -0.35
PPFIBP2-201ENST00000299492 RBPJQ06330 500 aa12.84□□□□□ -0.35
PPFIBP2-201ENST00000299492 ADIPOQQ15848 244 aa12.84□□□□□ -0.35
PPFIBP2-201ENST00000299492 SRSF7Q16629 238 aaKnown RBP eCLIP12.84□□□□□ -0.35
PPFIBP2-201ENST00000299492 TMEM183AQ8IXX5 376 aa12.84□□□□□ -0.35
PPFIBP2-201ENST00000299492 RITA1Q96K30 269 aa12.84□□□□□ -0.35
PPFIBP2-201ENST00000299492 M0QZ24 198 aa12.84□□□□□ -0.35
PPFIBP2-201ENST00000299492 SERF1AO75920 110 aa12.84□□□□□ -0.35
PPFIBP2-201ENST00000299492 CD3EP07766 207 aa12.84□□□□□ -0.35
PPFIBP2-201ENST00000299492 LMO1P25800 156 aa12.84□□□□□ -0.35
PPFIBP2-201ENST00000299492 DMRTA1Q5VZB9 504 aa12.84□□□□□ -0.35
PPFIBP2-201ENST00000299492 IGHV3-66A0A0C4DH42 116 aa12.83□□□□□ -0.36
PPFIBP2-201ENST00000299492 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.83□□□□□ -0.36
PPFIBP2-201ENST00000299492 HSBP1O75506 76 aa12.83□□□□□ -0.36
PPFIBP2-201ENST00000299492 GZMBP10144 247 aa12.83□□□□□ -0.36
PPFIBP2-201ENST00000299492 AREGP15514 252 aa12.83□□□□□ -0.36
PPFIBP2-201ENST00000299492 USF1P22415 310 aaPredicted RBP12.83□□□□□ -0.36
PPFIBP2-201ENST00000299492 SUB1P53999 127 aaKnown RBP eCLIP12.83□□□□□ -0.36
PPFIBP2-201ENST00000299492 PMCHL1Q16048 86 aa12.83□□□□□ -0.36
PPFIBP2-201ENST00000299492 LINC00305Q7Z4B0 112 aa12.83□□□□□ -0.36
PPFIBP2-201ENST00000299492 SLC25A33Q9BSK2 321 aa12.83□□□□□ -0.36
PPFIBP2-201ENST00000299492 ZNF430Q9H8G1 570 aaPredicted RBP12.83□□□□□ -0.36
PPFIBP2-201ENST00000299492 KCNIP2Q9NS61 270 aa12.83□□□□□ -0.36
PPFIBP2-201ENST00000299492 ZNF729A6NN14 1252 aaPredicted RBP12.83□□□□□ -0.36
PPFIBP2-201ENST00000299492 TNFRSF19Q9NS68 423 aa12.83□□□□□ -0.36
PPFIBP2-201ENST00000299492 IL19Q9UHD0 177 aa12.83□□□□□ -0.36
PPFIBP2-201ENST00000299492 AMMECR1Q9Y4X0 333 aaPredicted RBP12.82□□□□□ -0.36
PPFIBP2-201ENST00000299492 ADAMTS20P59510 1910 aa12.82□□□□□ -0.36
PPFIBP2-201ENST00000299492 ELOA3CA0A087WX78 387 aaPredicted RBP12.82□□□□□ -0.36
PPFIBP2-201ENST00000299492 PFN1P07737 140 aaKnown RBP12.82□□□□□ -0.36
PPFIBP2-201ENST00000299492 MBNL2Q5VZF2 373 aaKnown RBP12.82□□□□□ -0.36
PPFIBP2-201ENST00000299492 PRNTQ86SH4 94 aa12.82□□□□□ -0.36
PPFIBP2-201ENST00000299492 TRAV1-1A0A0B4J248 108 aa12.82□□□□□ -0.36
PPFIBP2-201ENST00000299492 SH2D7A6NKC9 451 aaPredicted RBP12.82□□□□□ -0.36
PPFIBP2-201ENST00000299492 GATCO43716 136 aaKnown RBP12.82□□□□□ -0.36
PPFIBP2-201ENST00000299492 KLRD1Q13241 179 aa12.82□□□□□ -0.36
PPFIBP2-201ENST00000299492 Q56UQ5 140 aa12.82□□□□□ -0.36
PPFIBP2-201ENST00000299492 CORO2AQ92828 525 aa12.82□□□□□ -0.36
PPFIBP2-201ENST00000299492 ST6GALNAC6Q969X2 333 aa12.82□□□□□ -0.36
PPFIBP2-201ENST00000299492 DNAJC4Q9NNZ3 241 aa12.82□□□□□ -0.36
PPFIBP2-201ENST00000299492 PDPNQ86YL7 162 aa12.81□□□□□ -0.36
PPFIBP2-201ENST00000299492 BORCS7Q96B45 105 aa12.81□□□□□ -0.36
PPFIBP2-201ENST00000299492 NEU1Q99519 415 aa12.81□□□□□ -0.36
PPFIBP2-201ENST00000299492 PMCHL2Q9BQD1 86 aa12.81□□□□□ -0.36
PPFIBP2-201ENST00000299492 IGHV1-69-2A0A0G2JMI3 117 aa12.81□□□□□ -0.36
PPFIBP2-201ENST00000299492 TEX38Q6PEX7 206 aa12.81□□□□□ -0.36
PPFIBP2-201ENST00000299492 TCF24Q7RTU0 167 aa12.81□□□□□ -0.36
PPFIBP2-201ENST00000299492 C1orf162Q8NEQ5 155 aaPredicted RBP12.81□□□□□ -0.36
PPFIBP2-201ENST00000299492 FAM57AQ8TBR7 257 aa12.81□□□□□ -0.36
PPFIBP2-201ENST00000299492 NPIPB11E5RHQ5 1161 aa12.81□□□□□ -0.36
PPFIBP2-201ENST00000299492 J3QW42 95 aa12.81□□□□□ -0.36
PPFIBP2-201ENST00000299492 HIST1H1BP16401 226 aaKnown RBP12.81□□□□□ -0.36
PPFIBP2-201ENST00000299492 PGLYRP4Q96LB8 373 aa12.81□□□□□ -0.36
PPFIBP2-201ENST00000299492 RPUSD1Q9UJJ7 312 aaKnown RBP12.81□□□□□ -0.36
PPFIBP2-201ENST00000299492 UPK2O00526 184 aa12.8□□□□□ -0.36
PPFIBP2-201ENST00000299492 DMRT1Q9Y5R6 373 aa12.8□□□□□ -0.36
PPFIBP2-201ENST00000299492 STAG3L2P0CL84 134 aa12.8□□□□□ -0.36
PPFIBP2-201ENST00000299492 STAG3L3P0CL85 134 aa12.8□□□□□ -0.36
PPFIBP2-201ENST00000299492 HOXB1P14653 301 aaPredicted RBP12.8□□□□□ -0.36
PPFIBP2-201ENST00000299492 RAB4AP20338 218 aa12.8□□□□□ -0.36
PPFIBP2-201ENST00000299492 CDKN1AP38936 164 aa12.8□□□□□ -0.36
PPFIBP2-201ENST00000299492 IGFL4Q6B9Z1 124 aa12.8□□□□□ -0.36
PPFIBP2-201ENST00000299492 MUC15Q8N387 334 aa12.8□□□□□ -0.36
PPFIBP2-201ENST00000299492 TMEM170AQ8WVE7 144 aa12.8□□□□□ -0.36
PPFIBP2-201ENST00000299492 ADTRPQ96IZ2 230 aa12.8□□□□□ -0.36
PPFIBP2-201ENST00000299492 TIMM9Q9Y5J7 89 aa12.8□□□□□ -0.36
PPFIBP2-201ENST00000299492 COL5A1P20908 1838 aaPredicted RBP12.8□□□□□ -0.36
PPFIBP2-201ENST00000299492 C8orf88P0DMB2 117 aa12.8□□□□□ -0.36
PPFIBP2-201ENST00000299492 RPL27AP46776 148 aaKnown RBP12.8□□□□□ -0.36
PPFIBP2-201ENST00000299492 OR4C13Q8NGP0 309 aa12.8□□□□□ -0.36
PPFIBP2-201ENST00000299492 MBD3L4A6NDZ8 208 aaPredicted RBP12.79□□□□□ -0.36
PPFIBP2-201ENST00000299492 MBD3L3A6NE82 208 aaPredicted RBP12.79□□□□□ -0.36
PPFIBP2-201ENST00000299492 MBD3L5A6NJ08 208 aaPredicted RBP12.79□□□□□ -0.36
PPFIBP2-201ENST00000299492 GPX4P36969 197 aaPredicted RBP12.79□□□□□ -0.36
PPFIBP2-201ENST00000299492 ZNF664Q8N3J9 261 aa12.79□□□□□ -0.36
PPFIBP2-201ENST00000299492 MBD3L2Q8NHZ7 208 aaPredicted RBP12.79□□□□□ -0.36
PPFIBP2-201ENST00000299492 VAMP8Q9BV40 100 aa12.79□□□□□ -0.36
PPFIBP2-201ENST00000299492 SFXN3Q9BWM7 321 aa12.79□□□□□ -0.36
PPFIBP2-201ENST00000299492 TRBV24-1A0A075B6N3 115 aa12.79□□□□□ -0.36
PPFIBP2-201ENST00000299492 IGKV1OR2-108A0A075B7D4 117 aa12.79□□□□□ -0.36
PPFIBP2-201ENST00000299492 PMS2P5A8MQ11 134 aa12.79□□□□□ -0.36
PPFIBP2-201ENST00000299492 TPPP2P59282 170 aa12.79□□□□□ -0.36
PPFIBP2-201ENST00000299492 BPIFB3P59826 476 aa12.79□□□□□ -0.36
PPFIBP2-201ENST00000299492 PKIAP61925 76 aa12.79□□□□□ -0.36
PPFIBP2-201ENST00000299492 LY6DQ14210 128 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms