RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 RPS10-NUDT3A0A1W2PQS6 291 aa16.45■□□□□ 0.22
SMCO4-201ENST00000298966 FNDC10F2Z333 226 aa16.45■□□□□ 0.22
SMCO4-201ENST00000298966 BLCAPP62952 87 aa16.45■□□□□ 0.22
SMCO4-201ENST00000298966 PJVKQ0ZLH3 352 aa16.45■□□□□ 0.22
SMCO4-201ENST00000298966 CLINT1Q14677 625 aa16.45■□□□□ 0.22
SMCO4-201ENST00000298966 Q6ZS46 218 aa16.45■□□□□ 0.22
SMCO4-201ENST00000298966 TMEM217Q8N7C4 229 aa16.45■□□□□ 0.22
SMCO4-201ENST00000298966 OR1L6Q8NGR2 347 aa16.45■□□□□ 0.22
SMCO4-201ENST00000298966 CGB1A6NKQ9 187 aa16.44■□□□□ 0.22
SMCO4-201ENST00000298966 PMS2P5A8MQ11 134 aa16.44■□□□□ 0.22
SMCO4-201ENST00000298966 CORTO00230 105 aa16.44■□□□□ 0.22
SMCO4-201ENST00000298966 IFNA5P01569 189 aa16.44■□□□□ 0.22
SMCO4-201ENST00000298966 SLC38A11Q08AI6 406 aa16.44■□□□□ 0.22
SMCO4-201ENST00000298966 ARL16Q0P5N6 197 aa16.44■□□□□ 0.22
SMCO4-201ENST00000298966 FXYD3Q14802 87 aa16.44■□□□□ 0.22
SMCO4-201ENST00000298966 ETV3LQ6ZN32 361 aa16.44■□□□□ 0.22
SMCO4-201ENST00000298966 CENPVQ7Z7K6 275 aaPredicted RBP16.44■□□□□ 0.22
SMCO4-201ENST00000298966 LILRB2Q8N423 598 aa16.44■□□□□ 0.22
SMCO4-201ENST00000298966 LRRC20Q8TCA0 184 aa16.44■□□□□ 0.22
SMCO4-201ENST00000298966 TMEM68Q96MH6 324 aa16.44■□□□□ 0.22
SMCO4-201ENST00000298966 IGLC7A0M8Q6 106 aa16.43■□□□□ 0.22
SMCO4-201ENST00000298966 IFNA4P05014 189 aa16.43■□□□□ 0.22
SMCO4-201ENST00000298966 SEC11BP0C7V7 166 aa16.43■□□□□ 0.22
SMCO4-201ENST00000298966 NHLRC4P0CG21 123 aaPredicted RBP16.43■□□□□ 0.22
SMCO4-201ENST00000298966 MYOD1P15172 320 aa16.43■□□□□ 0.22
SMCO4-201ENST00000298966 GNB1P62873 340 aa16.43■□□□□ 0.22
SMCO4-201ENST00000298966 DLK1P80370 383 aa16.43■□□□□ 0.22
SMCO4-201ENST00000298966 C5orf56Q8N8D9 126 aa16.43■□□□□ 0.22
SMCO4-201ENST00000298966 RNASEH2CQ8TDP1 164 aaKnown RBP16.43■□□□□ 0.22
SMCO4-201ENST00000298966 ARPC1AQ92747 370 aa16.43■□□□□ 0.22
SMCO4-201ENST00000298966 TMEM147Q9BVK8 224 aa16.43■□□□□ 0.22
SMCO4-201ENST00000298966 U3KQK5 164 aa16.43■□□□□ 0.22
SMCO4-201ENST00000298966 FCN1O00602 326 aa16.42■□□□□ 0.22
SMCO4-201ENST00000298966 CYB5BO43169 146 aa16.42■□□□□ 0.22
SMCO4-201ENST00000298966 OR13C7P0DN81 318 aa16.42■□□□□ 0.22
SMCO4-201ENST00000298966 RNASE2P10153 161 aaKnown RBP16.42■□□□□ 0.22
SMCO4-201ENST00000298966 WT1-ASQ06250 92 aa16.42■□□□□ 0.22
SMCO4-201ENST00000298966 VWC2Q2TAL6 325 aa16.42■□□□□ 0.22
SMCO4-201ENST00000298966 C10orf55Q5SWW7 151 aa16.42■□□□□ 0.22
SMCO4-201ENST00000298966 OR8G2PQ6IF36 304 aa16.42■□□□□ 0.22
SMCO4-201ENST00000298966 TMED6Q8WW62 240 aa16.42■□□□□ 0.22
SMCO4-201ENST00000298966 GNPNAT1Q96EK6 184 aaPredicted RBP16.42■□□□□ 0.22
SMCO4-201ENST00000298966 TEX22C9J3V5 150 aa16.41■□□□□ 0.22
SMCO4-201ENST00000298966 C3orf84H3BNL1 204 aa16.41■□□□□ 0.22
SMCO4-201ENST00000298966 NMBP08949 121 aa16.41■□□□□ 0.22
SMCO4-201ENST00000298966 SPP1P10451 314 aa16.41■□□□□ 0.22
SMCO4-201ENST00000298966 CX3CL1P78423 397 aa16.41■□□□□ 0.22
SMCO4-201ENST00000298966 SSBP2P81877 361 aaPredicted RBP16.41■□□□□ 0.22
SMCO4-201ENST00000298966 TCTEX1D4Q5JR98 221 aa16.41■□□□□ 0.22
SMCO4-201ENST00000298966 KHDC1LQ5JSQ8 128 aa16.41■□□□□ 0.22
SMCO4-201ENST00000298966 PVRIGQ6DKI7 326 aa16.41■□□□□ 0.22
SMCO4-201ENST00000298966 OR10W1Q8NGF6 305 aa16.41■□□□□ 0.22
SMCO4-201ENST00000298966 OR4X2Q8NGF9 303 aa16.41■□□□□ 0.22
SMCO4-201ENST00000298966 OR1P1Q8NH06 330 aa16.41■□□□□ 0.22
SMCO4-201ENST00000298966 CACNG8Q8WXS5 425 aa16.41■□□□□ 0.22
SMCO4-201ENST00000298966 UQCC1Q9NVA1 299 aa16.41■□□□□ 0.22
SMCO4-201ENST00000298966 RYR2Q92736 4967 aa16.4■□□□□ 0.22
SMCO4-201ENST00000298966 STAB2Q8WWQ8 2551 aa16.4■□□□□ 0.22
SMCO4-201ENST00000298966 LINC00862A6NCI5 91 aa16.4■□□□□ 0.22
SMCO4-201ENST00000298966 E7EUB6 86 aa16.4■□□□□ 0.22
SMCO4-201ENST00000298966 SOX15O60248 233 aa16.4■□□□□ 0.22
SMCO4-201ENST00000298966 SCGB1C1Q8TD33 95 aa16.4■□□□□ 0.22
SMCO4-201ENST00000298966 ABHD5Q8WTS1 349 aa16.4■□□□□ 0.22
SMCO4-201ENST00000298966 RNF141Q8WVD5 230 aa16.4■□□□□ 0.22
SMCO4-201ENST00000298966 IGHV7-81A0A0B4J1V7 117 aa16.39■□□□□ 0.21
SMCO4-201ENST00000298966 A0A1B0GW64 132 aa16.39■□□□□ 0.21
SMCO4-201ENST00000298966 NPIPB5A8MRT5 1133 aa16.39■□□□□ 0.21
SMCO4-201ENST00000298966 PRSS46E5RG02 174 aa16.39■□□□□ 0.21
SMCO4-201ENST00000298966 MPDU1O75352 247 aa16.39■□□□□ 0.21
SMCO4-201ENST00000298966 GPX4P36969 197 aaPredicted RBP16.39■□□□□ 0.21
SMCO4-201ENST00000298966 FAM74A1Q5RGS3 127 aa16.39■□□□□ 0.21
SMCO4-201ENST00000298966 ETFRF1Q6IPR1 90 aa16.39■□□□□ 0.21
SMCO4-201ENST00000298966 SLC25A24Q6NUK1 477 aa16.39■□□□□ 0.21
SMCO4-201ENST00000298966 LINC00482Q8N8I6 264 aa16.39■□□□□ 0.21
SMCO4-201ENST00000298966 TMEM170AQ8WVE7 144 aa16.39■□□□□ 0.21
SMCO4-201ENST00000298966 F11RQ9Y624 299 aaKnown RBP16.39■□□□□ 0.21
SMCO4-201ENST00000298966 BIRC6Q9NR09 4857 aa16.38■□□□□ 0.21
SMCO4-201ENST00000298966 CRYGCP07315 174 aa16.38■□□□□ 0.21
SMCO4-201ENST00000298966 SULT1A2P50226 295 aa16.38■□□□□ 0.21
SMCO4-201ENST00000298966 HSD17B11Q8NBQ5 300 aa16.38■□□□□ 0.21
SMCO4-201ENST00000298966 P2RX4Q99571 388 aa16.38■□□□□ 0.21
SMCO4-201ENST00000298966 MED9Q9NWA0 146 aa16.38■□□□□ 0.21
SMCO4-201ENST00000298966 ZMAT5Q9UDW3 170 aaKnown RBP16.38■□□□□ 0.21
SMCO4-201ENST00000298966 ATP6V0CP27449 155 aa16.37■□□□□ 0.21
SMCO4-201ENST00000298966 RAB5CP51148 216 aa16.37■□□□□ 0.21
SMCO4-201ENST00000298966 CRIP2P52943 208 aaPredicted RBP16.37■□□□□ 0.21
SMCO4-201ENST00000298966 SAT2Q96F10 170 aaPredicted RBP16.37■□□□□ 0.21
SMCO4-201ENST00000298966 PSMG3Q9BT73 122 aaPredicted RBP16.37■□□□□ 0.21
SMCO4-201ENST00000298966 MCRIP2Q9BUT9 160 aaKnown RBP16.37■□□□□ 0.21
SMCO4-201ENST00000298966 ZNF580Q9UK33 172 aa16.37■□□□□ 0.21
SMCO4-201ENST00000298966 TIMM9Q9Y5J7 89 aa16.37■□□□□ 0.21
SMCO4-201ENST00000298966 CTRB1P17538 263 aa16.36■□□□□ 0.21
SMCO4-201ENST00000298966 CTRB2Q6GPI1 263 aa16.36■□□□□ 0.21
SMCO4-201ENST00000298966 TTC9CQ8N5M4 171 aa16.36■□□□□ 0.21
SMCO4-201ENST00000298966 WDR61Q9GZS3 305 aaKnown RBP16.36■□□□□ 0.21
SMCO4-201ENST00000298966 NPVFQ9HCQ7 196 aa16.36■□□□□ 0.21
SMCO4-201ENST00000298966 KCNIP2Q9NS61 270 aa16.36■□□□□ 0.21
SMCO4-201ENST00000298966 UMAD1C9J7I0 102 aa16.35■□□□□ 0.21
SMCO4-201ENST00000298966 AREGP15514 252 aa16.35■□□□□ 0.21
SMCO4-201ENST00000298966 SH3BGRL3Q9H299 93 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms