RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 TMEM200BQ69YZ2 307 aa19.75■□□□□ 0.75
SPTSSA-201ENST00000298130 TMEM136Q6ZRR5 245 aa19.75■□□□□ 0.75
SPTSSA-201ENST00000298130 FAM167A-AS1Q96KT0 104 aa19.75■□□□□ 0.75
SPTSSA-201ENST00000298130 APC2O95996 2303 aa19.75■□□□□ 0.75
SPTSSA-201ENST00000298130 GNG5P63218 68 aa19.75■□□□□ 0.75
SPTSSA-201ENST00000298130 RPH3ALQ9UNE2 315 aa19.75■□□□□ 0.75
SPTSSA-201ENST00000298130 H3BTX0 84 aa19.74■□□□□ 0.75
SPTSSA-201ENST00000298130 M0R143 59 aa19.74■□□□□ 0.75
SPTSSA-201ENST00000298130 SFXN3Q9BWM7 321 aa19.74■□□□□ 0.75
SPTSSA-201ENST00000298130 NDUFA4L2Q9NRX3 87 aa19.74■□□□□ 0.75
SPTSSA-201ENST00000298130 ZNF355PQ9NSJ1 428 aa19.74■□□□□ 0.75
SPTSSA-201ENST00000298130 TAS2R45P59539 299 aa19.74■□□□□ 0.75
SPTSSA-201ENST00000298130 CYB5R2Q6BCY4 276 aa19.74■□□□□ 0.75
SPTSSA-201ENST00000298130 SIGLECL1Q8N7X8 197 aa19.74■□□□□ 0.75
SPTSSA-201ENST00000298130 OR10X1Q8NGY0 326 aa19.74■□□□□ 0.75
SPTSSA-201ENST00000298130 FLYWCH2Q96CP2 140 aaKnown RBP19.74■□□□□ 0.75
SPTSSA-201ENST00000298130 BET1LQ9NYM9 111 aa19.74■□□□□ 0.75
SPTSSA-201ENST00000298130 TBL2Q9Y4P3 447 aaKnown RBP19.74■□□□□ 0.75
SPTSSA-201ENST00000298130 CGB1A6NKQ9 187 aa19.73■□□□□ 0.75
SPTSSA-201ENST00000298130 ZNF253O75346 499 aa19.73■□□□□ 0.75
SPTSSA-201ENST00000298130 AMTP48728 403 aa19.73■□□□□ 0.75
SPTSSA-201ENST00000298130 LBHQ53QV2 105 aaPredicted RBP19.73■□□□□ 0.75
SPTSSA-201ENST00000298130 OR5B3Q8NH48 314 aa19.73■□□□□ 0.75
SPTSSA-201ENST00000298130 MOSP00540 346 aa19.73■□□□□ 0.75
SPTSSA-201ENST00000298130 APOA2P02652 100 aa19.73■□□□□ 0.75
SPTSSA-201ENST00000298130 COMPP49747 757 aaPredicted RBP19.73■□□□□ 0.75
SPTSSA-201ENST00000298130 CASP6P55212 293 aa19.73■□□□□ 0.75
SPTSSA-201ENST00000298130 PAFAH1B2P68402 229 aa19.73■□□□□ 0.75
SPTSSA-201ENST00000298130 HCP5Q6MZN7 132 aa19.73■□□□□ 0.75
SPTSSA-201ENST00000298130 IGF2BP2-AS1Q96M15 143 aa19.73■□□□□ 0.75
SPTSSA-201ENST00000298130 RANP62826 216 aaKnown RBP19.72■□□□□ 0.75
SPTSSA-201ENST00000298130 PATE2Q6UY27 113 aa19.72■□□□□ 0.75
SPTSSA-201ENST00000298130 ZNF833PQ6ZTB9 187 aa19.72■□□□□ 0.75
SPTSSA-201ENST00000298130 GNB1LQ9BYB4 327 aa19.72■□□□□ 0.75
SPTSSA-201ENST00000298130 DNAJC4Q9NNZ3 241 aa19.72■□□□□ 0.75
SPTSSA-201ENST00000298130 LY96Q9Y6Y9 160 aa19.72■□□□□ 0.75
SPTSSA-201ENST00000298130 ZNF292O60281 2723 aa19.72■□□□□ 0.75
SPTSSA-201ENST00000298130 ERHP84090 104 aaKnown RBP19.72■□□□□ 0.75
SPTSSA-201ENST00000298130 BLNKQ8WV28 456 aa19.72■□□□□ 0.75
SPTSSA-201ENST00000298130 ZNF714Q96N38 554 aa19.72■□□□□ 0.75
SPTSSA-201ENST00000298130 LINC00312Q9Y6C7 94 aa19.72■□□□□ 0.75
SPTSSA-201ENST00000298130 ZZEF1O43149 2961 aa19.72■□□□□ 0.75
SPTSSA-201ENST00000298130 PTPRZ1P23471 2315 aaPredicted RBP19.72■□□□□ 0.75
SPTSSA-201ENST00000298130 BMPR1BO00238 502 aa19.72■□□□□ 0.75
SPTSSA-201ENST00000298130 SLC25A17O43808 307 aa19.72■□□□□ 0.75
SPTSSA-201ENST00000298130 COX7A2P2O60397 106 aa19.72■□□□□ 0.75
SPTSSA-201ENST00000298130 PPOXP50336 477 aa19.72■□□□□ 0.75
SPTSSA-201ENST00000298130 RBMXL3Q8N7X1 1067 aaKnown RBP19.72■□□□□ 0.75
SPTSSA-201ENST00000298130 OR1L8Q8NGR8 309 aa19.72■□□□□ 0.75
SPTSSA-201ENST00000298130 CHODLQ9H9P2 273 aa19.72■□□□□ 0.75
SPTSSA-201ENST00000298130 ENSAO43768 121 aaKnown RBP19.71■□□□□ 0.75
SPTSSA-201ENST00000298130 CEACAM4O75871 244 aa19.71■□□□□ 0.75
SPTSSA-201ENST00000298130 NTF3P20783 257 aa19.71■□□□□ 0.75
SPTSSA-201ENST00000298130 NCOR1P1Q9H4R4 102 aa19.71■□□□□ 0.75
SPTSSA-201ENST00000298130 ZNF430Q9H8G1 570 aaPredicted RBP19.71■□□□□ 0.75
SPTSSA-201ENST00000298130 DPRXA6NFQ7 191 aa19.71■□□□□ 0.75
SPTSSA-201ENST00000298130 DLL1O00548 723 aa19.71■□□□□ 0.75
SPTSSA-201ENST00000298130 GPX1P07203 203 aa19.71■□□□□ 0.75
SPTSSA-201ENST00000298130 SLAQ13239 276 aa19.71■□□□□ 0.75
SPTSSA-201ENST00000298130 ADIPOQQ15848 244 aa19.71■□□□□ 0.75
SPTSSA-201ENST00000298130 VAMP8Q9BV40 100 aa19.71■□□□□ 0.75
SPTSSA-201ENST00000298130 SAP30LQ9HAJ7 183 aa19.71■□□□□ 0.75
SPTSSA-201ENST00000298130 OSTCQ9NRP0 149 aa19.71■□□□□ 0.75
SPTSSA-201ENST00000298130 CDC42EP3Q9UKI2 254 aa19.71■□□□□ 0.75
SPTSSA-201ENST00000298130 PSMB11A5LHX3 300 aa19.7■□□□□ 0.74
SPTSSA-201ENST00000298130 CORTO00230 105 aa19.7■□□□□ 0.74
SPTSSA-201ENST00000298130 TM4SF5O14894 197 aa19.7■□□□□ 0.74
SPTSSA-201ENST00000298130 ORM2P19652 201 aa19.7■□□□□ 0.74
SPTSSA-201ENST00000298130 TDGF1P3P51864 188 aa19.7■□□□□ 0.74
SPTSSA-201ENST00000298130 AMMECR1Q9Y4X0 333 aaPredicted RBP19.7■□□□□ 0.74
SPTSSA-201ENST00000298130 RAB4AP20338 218 aa19.7■□□□□ 0.74
SPTSSA-201ENST00000298130 GPR6P46095 362 aaPredicted RBP19.7■□□□□ 0.74
SPTSSA-201ENST00000298130 BSPH1Q075Z2 132 aa19.7■□□□□ 0.74
SPTSSA-201ENST00000298130 ATOH7Q8N100 152 aa19.7■□□□□ 0.74
SPTSSA-201ENST00000298130 NEU1Q99519 415 aa19.7■□□□□ 0.74
SPTSSA-201ENST00000298130 TRAV9-1A0A075B6T8 112 aa19.69■□□□□ 0.74
SPTSSA-201ENST00000298130 A0A1W2PS18 150 aa19.69■□□□□ 0.74
SPTSSA-201ENST00000298130 NKX6-3A6NJ46 265 aa19.69■□□□□ 0.74
SPTSSA-201ENST00000298130 FNDC10F2Z333 226 aa19.69■□□□□ 0.74
SPTSSA-201ENST00000298130 ISLRO14498 428 aa19.69■□□□□ 0.74
SPTSSA-201ENST00000298130 Q0VG73 95 aa19.69■□□□□ 0.74
SPTSSA-201ENST00000298130 TEX36Q5VZQ5 186 aa19.69■□□□□ 0.74
SPTSSA-201ENST00000298130 TEX43Q6ZNM6 134 aa19.69■□□□□ 0.74
SPTSSA-201ENST00000298130 PAXXQ9BUH6 204 aa19.69■□□□□ 0.74
SPTSSA-201ENST00000298130 SSBP4Q9BWG4 385 aaPredicted RBP19.69■□□□□ 0.74
SPTSSA-201ENST00000298130 NRN1Q9NPD7 142 aa19.69■□□□□ 0.74
SPTSSA-201ENST00000298130 SVEP1Q4LDE5 3571 aa19.69■□□□□ 0.74
SPTSSA-201ENST00000298130 C10orf113Q5VZT2 155 aa19.69■□□□□ 0.74
SPTSSA-201ENST00000298130 OSR1Q8TAX0 266 aaPredicted RBP19.69■□□□□ 0.74
SPTSSA-201ENST00000298130 GAL3ST2Q9H3Q3 398 aa19.69■□□□□ 0.74
SPTSSA-201ENST00000298130 LINC00574Q9H8X3 128 aa19.69■□□□□ 0.74
SPTSSA-201ENST00000298130 A0A1W2PRE2 83 aa19.68■□□□□ 0.74
SPTSSA-201ENST00000298130 C17orf100A8MU93 164 aa19.68■□□□□ 0.74
SPTSSA-201ENST00000298130 BRS3P32247 399 aa19.68■□□□□ 0.74
SPTSSA-201ENST00000298130 Q6ZS92 163 aa19.68■□□□□ 0.74
SPTSSA-201ENST00000298130 WNT10AQ9GZT5 417 aa19.68■□□□□ 0.74
SPTSSA-201ENST00000298130 GSX1Q9H4S2 264 aaPredicted RBP19.68■□□□□ 0.74
SPTSSA-201ENST00000298130 USF1P22415 310 aaPredicted RBP19.68■□□□□ 0.74
SPTSSA-201ENST00000298130 LEMD1Q68G75 181 aa19.68■□□□□ 0.74
SPTSSA-201ENST00000298130 OR5AN1Q8NGI8 311 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms