RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 HIPK2Q9H2X6 1198 aa11.87□□□□□ -0.51
CCDC140-201ENST00000295226 PSENENQ9NZ42 101 aa11.87□□□□□ -0.51
CCDC140-201ENST00000295226 PLA2G2EQ9NZK7 142 aa11.87□□□□□ -0.51
CCDC140-201ENST00000295226 FBN1P35555 2871 aaKnown RBP11.86□□□□□ -0.51
CCDC140-201ENST00000295226 SNAPINO95295 136 aa11.86□□□□□ -0.51
CCDC140-201ENST00000295226 OR8U8P0C7N1 319 aa11.86□□□□□ -0.51
CCDC140-201ENST00000295226 ERHP84090 104 aaKnown RBP11.86□□□□□ -0.51
CCDC140-201ENST00000295226 TMEM267Q0VDI3 215 aaPredicted RBP11.86□□□□□ -0.51
CCDC140-201ENST00000295226 BTN1A1Q13410 526 aa11.86□□□□□ -0.51
CCDC140-201ENST00000295226 AKIRIN2Q53H80 203 aa11.86□□□□□ -0.51
CCDC140-201ENST00000295226 MS4A10Q96PG2 267 aa11.86□□□□□ -0.51
CCDC140-201ENST00000295226 CIB3Q96Q77 187 aaPredicted RBP11.86□□□□□ -0.51
CCDC140-201ENST00000295226 PARD6GQ9BYG4 376 aaPredicted RBP11.86□□□□□ -0.51
CCDC140-201ENST00000295226 WNT10AQ9GZT5 417 aa11.86□□□□□ -0.51
CCDC140-201ENST00000295226 C16orf95Q9H693 158 aa11.86□□□□□ -0.51
CCDC140-201ENST00000295226 ZNF355PQ9NSJ1 428 aa11.86□□□□□ -0.51
CCDC140-201ENST00000295226 CST7O76096 145 aa11.85□□□□□ -0.51
CCDC140-201ENST00000295226 NDUFA7O95182 113 aa11.85□□□□□ -0.51
CCDC140-201ENST00000295226 CTRB1P17538 263 aa11.85□□□□□ -0.51
CCDC140-201ENST00000295226 PPIFP30405 207 aaKnown RBP11.85□□□□□ -0.51
CCDC140-201ENST00000295226 CRIP2P52943 208 aaPredicted RBP11.85□□□□□ -0.51
CCDC140-201ENST00000295226 MFAP2P55001 183 aa11.85□□□□□ -0.51
CCDC140-201ENST00000295226 RAB2AP61019 212 aa11.85□□□□□ -0.51
CCDC140-201ENST00000295226 ZNF616Q08AN1 781 aa11.85□□□□□ -0.51
CCDC140-201ENST00000295226 KRTAP24-1Q3LI83 254 aa11.85□□□□□ -0.51
CCDC140-201ENST00000295226 SPANXN5Q5MJ07 72 aa11.85□□□□□ -0.51
CCDC140-201ENST00000295226 CTRB2Q6GPI1 263 aa11.85□□□□□ -0.51
CCDC140-201ENST00000295226 CENPVQ7Z7K6 275 aaPredicted RBP11.85□□□□□ -0.51
CCDC140-201ENST00000295226 TTC9CQ8N5M4 171 aa11.85□□□□□ -0.51
CCDC140-201ENST00000295226 TMEM170AQ8WVE7 144 aa11.85□□□□□ -0.51
CCDC140-201ENST00000295226 P2RX4Q99571 388 aa11.85□□□□□ -0.51
CCDC140-201ENST00000295226 DMRT1Q9Y5R6 373 aa11.85□□□□□ -0.51
CCDC140-201ENST00000295226 IFNA10P01566 189 aa11.84□□□□□ -0.51
CCDC140-201ENST00000295226 RNASE2P10153 161 aaKnown RBP11.84□□□□□ -0.51
CCDC140-201ENST00000295226 DEFA4P12838 97 aa11.84□□□□□ -0.51
CCDC140-201ENST00000295226 SNCAP37840 140 aa11.84□□□□□ -0.51
CCDC140-201ENST00000295226 CFHR3Q02985 330 aa11.84□□□□□ -0.51
CCDC140-201ENST00000295226 ATP6V1FQ16864 119 aa11.84□□□□□ -0.51
CCDC140-201ENST00000295226 OR4F5Q8NH21 305 aa11.84□□□□□ -0.51
CCDC140-201ENST00000295226 SCGB1C1Q8TD33 95 aa11.84□□□□□ -0.51
CCDC140-201ENST00000295226 OR4C12Q96R67 309 aa11.84□□□□□ -0.51
CCDC140-201ENST00000295226 SH3BGRL3Q9H299 93 aa11.84□□□□□ -0.51
CCDC140-201ENST00000295226 KLK15Q9H2R5 256 aa11.84□□□□□ -0.51
CCDC140-201ENST00000295226 PSMB11A5LHX3 300 aa11.84□□□□□ -0.51
CCDC140-201ENST00000295226 HBE1P02100 147 aa11.84□□□□□ -0.51
CCDC140-201ENST00000295226 CRYGCP07315 174 aa11.84□□□□□ -0.51
CCDC140-201ENST00000295226 AKR1C8PQ5T2L2 129 aa11.84□□□□□ -0.51
CCDC140-201ENST00000295226 SLC25A24Q6NUK1 477 aa11.84□□□□□ -0.51
CCDC140-201ENST00000295226 TMEM182Q6ZP80 229 aaPredicted RBP11.84□□□□□ -0.51
CCDC140-201ENST00000295226 KLHDC1Q8N7A1 406 aa11.84□□□□□ -0.51
CCDC140-201ENST00000295226 TMEM217Q8N7C4 229 aa11.84□□□□□ -0.51
CCDC140-201ENST00000295226 FAM110DQ8TAY7 271 aaPredicted RBP11.84□□□□□ -0.51
CCDC140-201ENST00000295226 SRSF8Q9BRL6 282 aaKnown RBP11.84□□□□□ -0.51
CCDC140-201ENST00000295226 PSMG3Q9BT73 122 aaPredicted RBP11.84□□□□□ -0.51
CCDC140-201ENST00000295226 RNF114Q9Y508 228 aa11.84□□□□□ -0.51
CCDC140-201ENST00000295226 IGHV3-21A0A0B4J1V1 117 aa11.83□□□□□ -0.52
CCDC140-201ENST00000295226 NPIPB5A8MRT5 1133 aa11.83□□□□□ -0.52
CCDC140-201ENST00000295226 INS-IGF2F8WCM5 200 aa11.83□□□□□ -0.52
CCDC140-201ENST00000295226 AKR1C1Q04828 323 aa11.83□□□□□ -0.52
CCDC140-201ENST00000295226 C11orf44Q8N8P7 122 aa11.83□□□□□ -0.52
CCDC140-201ENST00000295226 SLC24A4Q8NFF2 622 aa11.83□□□□□ -0.52
CCDC140-201ENST00000295226 FAM213BQ8TBF2 198 aa11.83□□□□□ -0.52
CCDC140-201ENST00000295226 FANCD2OSQ96PS1 177 aa11.83□□□□□ -0.52
CCDC140-201ENST00000295226 F11RQ9Y624 299 aaKnown RBP11.83□□□□□ -0.52
CCDC140-201ENST00000295226 CLPSL1A2RUU4 121 aa11.82□□□□□ -0.52
CCDC140-201ENST00000295226 C15orf62A8K5M9 175 aa11.82□□□□□ -0.52
CCDC140-201ENST00000295226 IGHV3-48P01763 117 aa11.82□□□□□ -0.52
CCDC140-201ENST00000295226 SFTA3P0C7M3 94 aa11.82□□□□□ -0.52
CCDC140-201ENST00000295226 PF4V1P10720 104 aa11.82□□□□□ -0.52
CCDC140-201ENST00000295226 ADCYAP1P18509 176 aa11.82□□□□□ -0.52
CCDC140-201ENST00000295226 NPY1RP25929 384 aa11.82□□□□□ -0.52
CCDC140-201ENST00000295226 SERF2P84101 59 aa11.82□□□□□ -0.52
CCDC140-201ENST00000295226 SRSF3P84103 164 aaKnown RBP11.82□□□□□ -0.52
CCDC140-201ENST00000295226 MLANAQ16655 118 aa11.82□□□□□ -0.52
CCDC140-201ENST00000295226 GUK1Q16774 197 aa11.82□□□□□ -0.52
CCDC140-201ENST00000295226 TMEM14EPQ6UXP3 125 aa11.82□□□□□ -0.52
CCDC140-201ENST00000295226 MISP3Q96FF7 219 aa11.82□□□□□ -0.52
CCDC140-201ENST00000295226 TMEM68Q96MH6 324 aa11.82□□□□□ -0.52
CCDC140-201ENST00000295226 S4R3C0 116 aa11.82□□□□□ -0.52
CCDC140-201ENST00000295226 OR2J3O76001 311 aa11.81□□□□□ -0.52
CCDC140-201ENST00000295226 METTL15P1P0C7V9 234 aa11.81□□□□□ -0.52
CCDC140-201ENST00000295226 BSXQ3C1V8 233 aa11.81□□□□□ -0.52
CCDC140-201ENST00000295226 MRPL41Q8IXM3 137 aaKnown RBP11.81□□□□□ -0.52
CCDC140-201ENST00000295226 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.81□□□□□ -0.52
CCDC140-201ENST00000295226 OR5AU1Q8NGC0 362 aa11.81□□□□□ -0.52
CCDC140-201ENST00000295226 PINX1Q96BK5 328 aaKnown RBP11.81□□□□□ -0.52
CCDC140-201ENST00000295226 AGPAT2O15120 278 aa11.81□□□□□ -0.52
CCDC140-201ENST00000295226 NDUFB8O95169 186 aa11.81□□□□□ -0.52
CCDC140-201ENST00000295226 IGLV1-40P01703 118 aa11.81□□□□□ -0.52
CCDC140-201ENST00000295226 IGHG4P01861 327 aa11.81□□□□□ -0.52
CCDC140-201ENST00000295226 H2AFB1P0C5Y9 115 aa11.81□□□□□ -0.52
CCDC140-201ENST00000295226 PROK1P58294 105 aa11.81□□□□□ -0.52
CCDC140-201ENST00000295226 ATRAIDQ6UW56 229 aa11.81□□□□□ -0.52
CCDC140-201ENST00000295226 LILRB2Q8N423 598 aa11.81□□□□□ -0.52
CCDC140-201ENST00000295226 OR1P1Q8NH06 330 aa11.81□□□□□ -0.52
CCDC140-201ENST00000295226 TMEM231Q9H6L2 316 aa11.81□□□□□ -0.52
CCDC140-201ENST00000295226 ZNF580Q9UK33 172 aa11.81□□□□□ -0.52
CCDC140-201ENST00000295226 TIMM9Q9Y5J7 89 aa11.81□□□□□ -0.52
CCDC140-201ENST00000295226 IGLV11-55A0A075B6I3 123 aa11.8□□□□□ -0.52
CCDC140-201ENST00000295226 TRAV1-1A0A0B4J248 108 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms