RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 CD300EQ496F6 205 aaPredicted RBP13.5□□□□□ -0.25
SSRP1-202ENST00000293880 C9orf153Q5TBE3 101 aa13.5□□□□□ -0.25
SSRP1-202ENST00000293880 SLC25A28Q96A46 364 aa13.5□□□□□ -0.25
SSRP1-202ENST00000293880 ST20Q9HBF5 79 aa13.5□□□□□ -0.25
SSRP1-202ENST00000293880 C21orf62Q9NYP8 219 aa13.5□□□□□ -0.25
SSRP1-202ENST00000293880 BTCP35070 178 aa13.5□□□□□ -0.25
SSRP1-202ENST00000293880 C11orf44Q8N8P7 122 aa13.5□□□□□ -0.25
SSRP1-202ENST00000293880 RNF126Q9BV68 326 aa13.5□□□□□ -0.25
SSRP1-202ENST00000293880 COL24A1Q17RW2 1714 aa13.5□□□□□ -0.25
SSRP1-202ENST00000293880 C3orf36Q3SXR2 165 aa13.49□□□□□ -0.25
SSRP1-202ENST00000293880 SCN4AP35499 1836 aa13.49□□□□□ -0.25
SSRP1-202ENST00000293880 hDV102S1A0JD36 115 aa13.49□□□□□ -0.25
SSRP1-202ENST00000293880 H7C1H1 209 aa13.49□□□□□ -0.25
SSRP1-202ENST00000293880 PRB1P04280 392 aa13.49□□□□□ -0.25
SSRP1-202ENST00000293880 PAPPA-AS1Q5QFB9 102 aa13.49□□□□□ -0.25
SSRP1-202ENST00000293880 TMEM170AQ8WVE7 144 aa13.49□□□□□ -0.25
SSRP1-202ENST00000293880 TM2D1Q9BX74 207 aa13.49□□□□□ -0.25
SSRP1-202ENST00000293880 GGTLC3B5MD39 225 aa13.49□□□□□ -0.25
SSRP1-202ENST00000293880 GLRXP35754 106 aa13.49□□□□□ -0.25
SSRP1-202ENST00000293880 HIST1H2BLQ99880 126 aa13.49□□□□□ -0.25
SSRP1-202ENST00000293880 TGFBR3LH3BV60 316 aa13.49□□□□□ -0.25
SSRP1-202ENST00000293880 COLCA1Q6ZS62 124 aa13.49□□□□□ -0.25
SSRP1-202ENST00000293880 LYZL4Q96KX0 146 aa13.49□□□□□ -0.25
SSRP1-202ENST00000293880 IGHV1-2P23083 117 aa13.49□□□□□ -0.25
SSRP1-202ENST00000293880 MCRIP2Q9BUT9 160 aaKnown RBP13.49□□□□□ -0.25
SSRP1-202ENST00000293880 TRPM6Q9BX84 2022 aa13.48□□□□□ -0.25
SSRP1-202ENST00000293880 OR4X2Q8NGF9 303 aa13.48□□□□□ -0.25
SSRP1-202ENST00000293880 NXT2Q9NPJ8 142 aaKnown RBP13.48□□□□□ -0.25
SSRP1-202ENST00000293880 CHCHD2Q9Y6H1 151 aaPredicted RBP13.48□□□□□ -0.25
SSRP1-202ENST00000293880 DNAJC13O75165 2243 aa13.48□□□□□ -0.25
SSRP1-202ENST00000293880 NCR2O95944 276 aa13.48□□□□□ -0.25
SSRP1-202ENST00000293880 CD28P10747 220 aa13.48□□□□□ -0.25
SSRP1-202ENST00000293880 APOBEC3AP31941 199 aaPredicted RBP13.48□□□□□ -0.25
SSRP1-202ENST00000293880 TDGF1P3P51864 188 aa13.48□□□□□ -0.25
SSRP1-202ENST00000293880 IGKCP01834 107 aa13.48□□□□□ -0.25
SSRP1-202ENST00000293880 ZCCHC24Q8N2G6 241 aaKnown RBP13.48□□□□□ -0.25
SSRP1-202ENST00000293880 UBE2CO00762 179 aa13.48□□□□□ -0.25
SSRP1-202ENST00000293880 OR9G9P0C7N8 305 aa13.48□□□□□ -0.25
SSRP1-202ENST00000293880 UCNP55089 124 aa13.48□□□□□ -0.25
SSRP1-202ENST00000293880 DPH3P1Q9H4G8 78 aa13.48□□□□□ -0.25
SSRP1-202ENST00000293880 PTPRFP10586 1907 aa13.47□□□□□ -0.25
SSRP1-202ENST00000293880 IGKV2-40A0A087WW87 121 aaPredicted RBP13.47□□□□□ -0.25
SSRP1-202ENST00000293880 A0A087WWC5 75 aa13.47□□□□□ -0.25
SSRP1-202ENST00000293880 IGKV2D-40P01614 121 aaPredicted RBP13.47□□□□□ -0.25
SSRP1-202ENST00000293880 RFNGQ9Y644 331 aa13.47□□□□□ -0.25
SSRP1-202ENST00000293880 LYNX1G3V0Z9 82 aa13.47□□□□□ -0.25
SSRP1-202ENST00000293880 CXCL1P09341 107 aa13.47□□□□□ -0.25
SSRP1-202ENST00000293880 LYNX1P0DP58 116 aa13.47□□□□□ -0.25
SSRP1-202ENST00000293880 ATXN8Q156A1 80 aa13.47□□□□□ -0.25
SSRP1-202ENST00000293880 CCDC88CQ9P219 2028 aa13.47□□□□□ -0.25
SSRP1-202ENST00000293880 COL11A1P12107 1806 aaPredicted RBP13.47□□□□□ -0.25
SSRP1-202ENST00000293880 OTORQ9NRC9 128 aa13.47□□□□□ -0.25
SSRP1-202ENST00000293880 LINC00527Q9UJ94 153 aa13.47□□□□□ -0.25
SSRP1-202ENST00000293880 IGHV2OR16-5A0A0B4J2B6 119 aa13.47□□□□□ -0.25
SSRP1-202ENST00000293880 IFNL4K9M1U5 179 aa13.47□□□□□ -0.25
SSRP1-202ENST00000293880 UMODP07911 640 aa13.47□□□□□ -0.25
SSRP1-202ENST00000293880 CA7P43166 264 aa13.47□□□□□ -0.25
SSRP1-202ENST00000293880 STHQ8IWL8 128 aa13.47□□□□□ -0.25
SSRP1-202ENST00000293880 CTHRC1Q96CG8 243 aa13.47□□□□□ -0.25
SSRP1-202ENST00000293880 ZNF703Q9H7S9 590 aaPredicted RBP13.47□□□□□ -0.25
SSRP1-202ENST00000293880 M0R2P5 195 aa13.47□□□□□ -0.25
SSRP1-202ENST00000293880 B9A039 149 aa13.46□□□□□ -0.25
SSRP1-202ENST00000293880 GREM1O60565 184 aa13.46□□□□□ -0.25
SSRP1-202ENST00000293880 RAB9AP51151 201 aa13.46□□□□□ -0.25
SSRP1-202ENST00000293880 NSUN5P1Q3KNT7 163 aa13.46□□□□□ -0.25
SSRP1-202ENST00000293880 SPATA31B1PQ5VZV4 182 aa13.46□□□□□ -0.25
SSRP1-202ENST00000293880 DPM2O94777 84 aa13.46□□□□□ -0.25
SSRP1-202ENST00000293880 COX5BP10606 129 aa13.46□□□□□ -0.25
SSRP1-202ENST00000293880 A0A0A6YYD4 124 aa13.46□□□□□ -0.25
SSRP1-202ENST00000293880 ZNF415Q09FC8 603 aa13.46□□□□□ -0.25
SSRP1-202ENST00000293880 GAGE2AQ6NT46 116 aa13.46□□□□□ -0.25
SSRP1-202ENST00000293880 ERG28Q9UKR5 140 aa13.46□□□□□ -0.25
SSRP1-202ENST00000293880 PDCD11Q14690 1871 aaKnown RBP13.46□□□□□ -0.25
SSRP1-202ENST00000293880 Q6ZT83 130 aa13.46□□□□□ -0.26
SSRP1-202ENST00000293880 TRAV8-3A0A0A6YYJ7 113 aa13.45□□□□□ -0.26
SSRP1-202ENST00000293880 EFEMP2O95967 443 aa13.45□□□□□ -0.26
SSRP1-202ENST00000293880 RNF182Q8N6D2 247 aa13.45□□□□□ -0.26
SSRP1-202ENST00000293880 SCN2AQ99250 2005 aa13.45□□□□□ -0.26
SSRP1-202ENST00000293880 HOXB1P14653 301 aaPredicted RBP13.45□□□□□ -0.26
SSRP1-202ENST00000293880 ADAMTSL5Q6ZMM2 481 aa13.45□□□□□ -0.26
SSRP1-202ENST00000293880 OCC1Q8TAD7 63 aa13.45□□□□□ -0.26
SSRP1-202ENST00000293880 NUP214P35658 2090 aaPredicted RBP13.45□□□□□ -0.26
SSRP1-202ENST00000293880 IFI27P40305 119 aaPredicted RBP13.44□□□□□ -0.26
SSRP1-202ENST00000293880 PPP1R32Q7Z5V6 425 aa13.44□□□□□ -0.26
SSRP1-202ENST00000293880 RIPPLY2Q5TAB7 128 aa13.44□□□□□ -0.26
SSRP1-202ENST00000293880 C2orf82Q6UX34 121 aa13.44□□□□□ -0.26
SSRP1-202ENST00000293880 BCL6BQ8N143 479 aaPredicted RBP13.44□□□□□ -0.26
SSRP1-202ENST00000293880 GAGE12BA1L429 117 aa13.44□□□□□ -0.26
SSRP1-202ENST00000293880 LAMTOR3Q9UHA4 124 aa13.44□□□□□ -0.26
SSRP1-202ENST00000293880 SRSF1Q07955 248 aaKnown RBP eCLIP13.44□□□□□ -0.26
SSRP1-202ENST00000293880 ANKRD36A6QL64 1941 aa13.44□□□□□ -0.26
SSRP1-202ENST00000293880 PSG3Q16557 428 aa13.44□□□□□ -0.26
SSRP1-202ENST00000293880 MPV17L2Q567V2 206 aa13.44□□□□□ -0.26
SSRP1-202ENST00000293880 GLRX5Q86SX6 157 aa13.44□□□□□ -0.26
SSRP1-202ENST00000293880 AMBPP02760 352 aa13.43□□□□□ -0.26
SSRP1-202ENST00000293880 PSG7Q13046 419 aa13.43□□□□□ -0.26
SSRP1-202ENST00000293880 LCN12Q6JVE5 192 aa13.43□□□□□ -0.26
SSRP1-202ENST00000293880 CIARTQ8N365 385 aaPredicted RBP13.43□□□□□ -0.26
SSRP1-202ENST00000293880 HIST3H2BBQ8N257 126 aa13.43□□□□□ -0.26
SSRP1-202ENST00000293880 OSR1Q8TAX0 266 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms