RNA–Protein interactions for RNA: ENST00000292408.8

FGFR4-201, Transcript of fibroblast growth factor receptor 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene FGFR4, Length 3,122 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-201ENST00000292408 PRR20BP86481 221 aa13.4□□□□□ -0.26
FGFR4-201ENST00000292408 PRR20AP86496 221 aa13.4□□□□□ -0.26
FGFR4-201ENST00000292408 C17orf58Q2M2W7 97 aa13.4□□□□□ -0.26
FGFR4-201ENST00000292408 C19orf35Q6ZS72 473 aa13.4□□□□□ -0.26
FGFR4-201ENST00000292408 Q8N976 141 aa13.4□□□□□ -0.26
FGFR4-201ENST00000292408 SLC35D1Q9NTN3 355 aa13.4□□□□□ -0.26
FGFR4-201ENST00000292408 SLC45A2Q9UMX9 530 aa13.4□□□□□ -0.26
FGFR4-201ENST00000292408 CX3CL1P78423 397 aa13.4□□□□□ -0.26
FGFR4-201ENST00000292408 RNASEKQ6P5S7 137 aaKnown RBP13.4□□□□□ -0.26
FGFR4-201ENST00000292408 NCOR1P1Q9H4R4 102 aa13.4□□□□□ -0.26
FGFR4-201ENST00000292408 APCSP02743 223 aa13.39□□□□□ -0.27
FGFR4-201ENST00000292408 HNRNPA3P51991 378 aaKnown RBP13.39□□□□□ -0.27
FGFR4-201ENST00000292408 KLF3P57682 345 aaPredicted RBP13.39□□□□□ -0.27
FGFR4-201ENST00000292408 PPP1R35Q8TAP8 253 aa13.39□□□□□ -0.27
FGFR4-201ENST00000292408 ZNF331Q9NQX6 463 aaPredicted RBP13.39□□□□□ -0.27
FGFR4-201ENST00000292408 TECRQ9NZ01 308 aaKnown RBP13.39□□□□□ -0.27
FGFR4-201ENST00000292408 DPRXA6NFQ7 191 aa13.39□□□□□ -0.27
FGFR4-201ENST00000292408 FOXA3P55318 350 aaPredicted RBP13.39□□□□□ -0.27
FGFR4-201ENST00000292408 RNF2Q99496 336 aa13.39□□□□□ -0.27
FGFR4-201ENST00000292408 SFXN3Q9BWM7 321 aa13.39□□□□□ -0.27
FGFR4-201ENST00000292408 OR52E5Q8NH55 327 aa13.39□□□□□ -0.27
FGFR4-201ENST00000292408 TSKUQ8WUA8 353 aa13.39□□□□□ -0.27
FGFR4-201ENST00000292408 DDB2Q92466 427 aa13.39□□□□□ -0.27
FGFR4-201ENST00000292408 TMEM14BQ9NUH8 114 aa13.39□□□□□ -0.27
FGFR4-201ENST00000292408 HSBP1L1C9JCN9 74 aa13.38□□□□□ -0.27
FGFR4-201ENST00000292408 HYPMO75409 117 aa13.38□□□□□ -0.27
FGFR4-201ENST00000292408 CD59P13987 128 aa13.38□□□□□ -0.27
FGFR4-201ENST00000292408 AREGP15514 252 aa13.38□□□□□ -0.27
FGFR4-201ENST00000292408 TMPRSS3P57727 454 aa13.38□□□□□ -0.27
FGFR4-201ENST00000292408 TNXAQ16473 311 aa13.38□□□□□ -0.27
FGFR4-201ENST00000292408 C1orf174Q8IYL3 243 aa13.38□□□□□ -0.27
FGFR4-201ENST00000292408 KIR3DL3Q8N743 410 aa13.38□□□□□ -0.27
FGFR4-201ENST00000292408 BORCS7Q96B45 105 aa13.38□□□□□ -0.27
FGFR4-201ENST00000292408 ASCL2Q99929 193 aa13.38□□□□□ -0.27
FGFR4-201ENST00000292408 CLEC7AQ9BXN2 247 aa13.38□□□□□ -0.27
FGFR4-201ENST00000292408 CLEC5AQ9NY25 188 aa13.38□□□□□ -0.27
FGFR4-201ENST00000292408 APC2O95996 2303 aa13.38□□□□□ -0.27
FGFR4-201ENST00000292408 ZNF324O75467 553 aaPredicted RBP13.38□□□□□ -0.27
FGFR4-201ENST00000292408 IGLV2-8P01709 118 aa13.38□□□□□ -0.27
FGFR4-201ENST00000292408 DLX1P56177 255 aa13.38□□□□□ -0.27
FGFR4-201ENST00000292408 PEAR1Q5VY43 1037 aaPredicted RBP13.38□□□□□ -0.27
FGFR4-201ENST00000292408 NIT1Q86X76 327 aa13.38□□□□□ -0.27
FGFR4-201ENST00000292408 KCNS1Q96KK3 526 aa13.38□□□□□ -0.27
FGFR4-201ENST00000292408 TXNDC17Q9BRA2 123 aa13.38□□□□□ -0.27
FGFR4-201ENST00000292408 GNB1LQ9BYB4 327 aa13.38□□□□□ -0.27
FGFR4-201ENST00000292408 SH3BGRL2Q9UJC5 107 aa13.38□□□□□ -0.27
FGFR4-201ENST00000292408 TEX50A0A1B0GTY4 177 aa13.37□□□□□ -0.27
FGFR4-201ENST00000292408 C9JCJ5 164 aa13.37□□□□□ -0.27
FGFR4-201ENST00000292408 CCL8P80075 99 aa13.37□□□□□ -0.27
FGFR4-201ENST00000292408 Q0VG73 95 aa13.37□□□□□ -0.27
FGFR4-201ENST00000292408 DIAPH2-AS1Q14236 149 aa13.37□□□□□ -0.27
FGFR4-201ENST00000292408 TMEM249Q2WGJ8 235 aa13.37□□□□□ -0.27
FGFR4-201ENST00000292408 OR2D3Q8NGH3 330 aa13.37□□□□□ -0.27
FGFR4-201ENST00000292408 SAA1P0DJI8 122 aaPredicted RBP13.37□□□□□ -0.27
FGFR4-201ENST00000292408 VAMP3Q15836 100 aa13.37□□□□□ -0.27
FGFR4-201ENST00000292408 C11orf52Q96A22 123 aa13.37□□□□□ -0.27
FGFR4-201ENST00000292408 ZFHX2Q9C0A1 2572 aaPredicted RBP13.37□□□□□ -0.27
FGFR4-201ENST00000292408 IGHV3-72A0A0B4J1Y9 119 aa13.37□□□□□ -0.27
FGFR4-201ENST00000292408 HSBP1O75506 76 aa13.37□□□□□ -0.27
FGFR4-201ENST00000292408 CCL3L1P16619 93 aa13.37□□□□□ -0.27
FGFR4-201ENST00000292408 ZNF137PP52743 207 aa13.37□□□□□ -0.27
FGFR4-201ENST00000292408 GDF5OSQ5U4N7 250 aa13.37□□□□□ -0.27
FGFR4-201ENST00000292408 BHLHA15Q7RTS1 189 aaPredicted RBP13.37□□□□□ -0.27
FGFR4-201ENST00000292408 ZGRF1Q86YA3 2104 aa13.37□□□□□ -0.27
FGFR4-201ENST00000292408 NEUROG1Q92886 237 aa13.37□□□□□ -0.27
FGFR4-201ENST00000292408 TMEM167BQ9NRX6 74 aa13.37□□□□□ -0.27
FGFR4-201ENST00000292408 TMEM238LA0A1B0GVL6 79 aa13.36□□□□□ -0.27
FGFR4-201ENST00000292408 CT45A6P0DMU7 189 aa13.36□□□□□ -0.27
FGFR4-201ENST00000292408 CT45A5P0DMU8 189 aa13.36□□□□□ -0.27
FGFR4-201ENST00000292408 CT45A7P0DMV0 189 aa13.36□□□□□ -0.27
FGFR4-201ENST00000292408 ORM2P19652 201 aa13.36□□□□□ -0.27
FGFR4-201ENST00000292408 NPIPB3Q92617 1050 aa13.36□□□□□ -0.27
FGFR4-201ENST00000292408 GSX1Q9H4S2 264 aaPredicted RBP13.36□□□□□ -0.27
FGFR4-201ENST00000292408 KBTBD11-OT1A0A1B0GTJ5 212 aa13.36□□□□□ -0.27
FGFR4-201ENST00000292408 ISLRO14498 428 aa13.36□□□□□ -0.27
FGFR4-201ENST00000292408 AMY1AP04745 511 aa13.36□□□□□ -0.27
FGFR4-201ENST00000292408 RPL19P84098 196 aaKnown RBP13.36□□□□□ -0.27
FGFR4-201ENST00000292408 C22orf34Q6ZV56 151 aa13.36□□□□□ -0.27
FGFR4-201ENST00000292408 TCF24Q7RTU0 167 aa13.36□□□□□ -0.27
FGFR4-201ENST00000292408 CSTL1Q9H114 145 aa13.36□□□□□ -0.27
FGFR4-201ENST00000292408 PROCRQ9UNN8 238 aa13.36□□□□□ -0.27
FGFR4-201ENST00000292408 CDX4O14627 284 aaPredicted RBP13.35□□□□□ -0.27
FGFR4-201ENST00000292408 MOSP00540 346 aa13.35□□□□□ -0.27
FGFR4-201ENST00000292408 UBE2V1Q13404 147 aa13.35□□□□□ -0.27
FGFR4-201ENST00000292408 ZNF439Q8NDP4 499 aa13.35□□□□□ -0.27
FGFR4-201ENST00000292408 OR4B1Q8NGF8 309 aa13.35□□□□□ -0.27
FGFR4-201ENST00000292408 FOXA2Q9Y261 457 aaPredicted RBP13.35□□□□□ -0.27
FGFR4-201ENST00000292408 ZNF891A8MT65 544 aaPredicted RBP13.35□□□□□ -0.27
FGFR4-201ENST00000292408 IGLC2P0DOY2 106 aa13.35□□□□□ -0.27
FGFR4-201ENST00000292408 IGLC3P0DOY3 106 aa13.35□□□□□ -0.27
FGFR4-201ENST00000292408 MRPL20Q9BYC9 149 aaKnown RBP13.35□□□□□ -0.27
FGFR4-201ENST00000292408 MRPL36Q9P0J6 103 aaKnown RBP13.35□□□□□ -0.27
FGFR4-201ENST00000292408 COLQQ9Y215 455 aaPredicted RBP13.35□□□□□ -0.27
FGFR4-201ENST00000292408 AMMECR1Q9Y4X0 333 aaPredicted RBP13.35□□□□□ -0.27
FGFR4-201ENST00000292408 ANKRD11Q6UB99 2663 aaPredicted RBP13.35□□□□□ -0.27
FGFR4-201ENST00000292408 M0R2Z0 102 aa13.35□□□□□ -0.27
FGFR4-201ENST00000292408 F2RL2O00254 374 aa13.35□□□□□ -0.27
FGFR4-201ENST00000292408 C8orf88P0DMB2 117 aa13.35□□□□□ -0.27
FGFR4-201ENST00000292408 HCP5Q6MZN7 132 aa13.35□□□□□ -0.27
FGFR4-201ENST00000292408 C18orf32Q8TCD1 76 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms