RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 TRAV5A0A0B4J249 113 aa15.31■□□□□ 0.04
SHF-201ENST00000290894 H7BYZ3 331 aa15.31■□□□□ 0.04
SHF-201ENST00000290894 RND2P52198 227 aa15.31■□□□□ 0.04
SHF-201ENST00000290894 NDUFA6P56556 154 aa15.31■□□□□ 0.04
SHF-201ENST00000290894 PRSS8Q16651 343 aa15.31■□□□□ 0.04
SHF-201ENST00000290894 TMEM249Q2WGJ8 235 aa15.31■□□□□ 0.04
SHF-201ENST00000290894 UHRF2Q96PU4 802 aa15.31■□□□□ 0.04
SHF-201ENST00000290894 UBTD1Q9HAC8 227 aa15.31■□□□□ 0.04
SHF-201ENST00000290894 NIT2Q9NQR4 276 aa15.31■□□□□ 0.04
SHF-201ENST00000290894 FUT9Q9Y231 359 aa15.31■□□□□ 0.04
SHF-201ENST00000290894 LINC00587B1AMM8 73 aa15.3■□□□□ 0.04
SHF-201ENST00000290894 FNDC10F2Z333 226 aa15.3■□□□□ 0.04
SHF-201ENST00000290894 FCN1O00602 326 aa15.3■□□□□ 0.04
SHF-201ENST00000290894 IGLC7A0M8Q6 106 aa15.3■□□□□ 0.04
SHF-201ENST00000290894 MFAP2P55001 183 aa15.3■□□□□ 0.04
SHF-201ENST00000290894 LINC01551Q86U37 167 aa15.3■□□□□ 0.04
SHF-201ENST00000290894 TNFRSF14Q92956 283 aa15.3■□□□□ 0.04
SHF-201ENST00000290894 ZNF503Q96F45 646 aa15.3■□□□□ 0.04
SHF-201ENST00000290894 SIGLEC9Q9Y336 463 aa15.3■□□□□ 0.04
SHF-201ENST00000290894 C19orf84I3L1E1 186 aa15.29■□□□□ 0.04
SHF-201ENST00000290894 TIMM23O14925 209 aa15.29■□□□□ 0.04
SHF-201ENST00000290894 BEND2Q8NDZ0 799 aa15.29■□□□□ 0.04
SHF-201ENST00000290894 SSBP3Q9BWW4 388 aaPredicted RBP15.29■□□□□ 0.04
SHF-201ENST00000290894 MYO18BQ8IUG5 2567 aa15.29■□□□□ 0.04
SHF-201ENST00000290894 GALR1P47211 349 aa15.28■□□□□ 0.04
SHF-201ENST00000290894 A0A1W2PPQ1 181 aa15.28■□□□□ 0.04
SHF-201ENST00000290894 MOSP00540 346 aa15.28■□□□□ 0.04
SHF-201ENST00000290894 HOXA5P20719 270 aa15.28■□□□□ 0.04
SHF-201ENST00000290894 RPL27AP46776 148 aaKnown RBP15.28■□□□□ 0.04
SHF-201ENST00000290894 PLGLAQ15195 96 aa15.28■□□□□ 0.04
SHF-201ENST00000290894 C8orf46Q8TAG6 207 aa15.28■□□□□ 0.04
SHF-201ENST00000290894 CTDSP1Q9GZU7 261 aa15.28■□□□□ 0.04
SHF-201ENST00000290894 FBLN7Q53RD9 439 aa15.27■□□□□ 0.04
SHF-201ENST00000290894 PPP1R27Q86WC6 154 aa15.27■□□□□ 0.04
SHF-201ENST00000290894 CACNG8Q8WXS5 425 aa15.27■□□□□ 0.04
SHF-201ENST00000290894 USP9XQ93008 2570 aaPredicted RBP15.27■□□□□ 0.04
SHF-201ENST00000290894 LOC105371242A0A075B767 164 aa15.27■□□□□ 0.03
SHF-201ENST00000290894 HIST1H2BKO60814 126 aa15.27■□□□□ 0.03
SHF-201ENST00000290894 HIST1H2BJP06899 126 aa15.27■□□□□ 0.03
SHF-201ENST00000290894 HIST1H2BOP23527 126 aa15.27■□□□□ 0.03
SHF-201ENST00000290894 HIST1H2BBP33778 126 aa15.27■□□□□ 0.03
SHF-201ENST00000290894 SUB1P53999 127 aaKnown RBP eCLIP15.27■□□□□ 0.03
SHF-201ENST00000290894 ATP5IP56385 69 aaPredicted RBP15.27■□□□□ 0.03
SHF-201ENST00000290894 HIST1H2BDP58876 126 aa15.27■□□□□ 0.03
SHF-201ENST00000290894 HIST1H2BCP62807 126 aa15.27■□□□□ 0.03
SHF-201ENST00000290894 HIST2H2BEQ16778 126 aa15.27■□□□□ 0.03
SHF-201ENST00000290894 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.27■□□□□ 0.03
SHF-201ENST00000290894 MMD2Q8IY49 270 aa15.27■□□□□ 0.03
SHF-201ENST00000290894 TEX45Q8NA69 505 aa15.27■□□□□ 0.03
SHF-201ENST00000290894 LY6G5BQ8NDX9 201 aa15.27■□□□□ 0.03
SHF-201ENST00000290894 HIST1H2BHQ93079 126 aa15.27■□□□□ 0.03
SHF-201ENST00000290894 HIST1H2BNQ99877 126 aa15.27■□□□□ 0.03
SHF-201ENST00000290894 HIST1H2BMQ99879 126 aa15.27■□□□□ 0.03
SHF-201ENST00000290894 SLC25A33Q9BSK2 321 aa15.27■□□□□ 0.03
SHF-201ENST00000290894 GSX1Q9H4S2 264 aaPredicted RBP15.27■□□□□ 0.03
SHF-201ENST00000290894 NDUFS6O75380 124 aaKnown RBP15.26■□□□□ 0.03
SHF-201ENST00000290894 MT-CO2P00403 227 aa15.26■□□□□ 0.03
SHF-201ENST00000290894 GPX4P36969 197 aaPredicted RBP15.26■□□□□ 0.03
SHF-201ENST00000290894 FAM3BP58499 235 aaPredicted RBP15.26■□□□□ 0.03
SHF-201ENST00000290894 FRZBQ92765 325 aa15.26■□□□□ 0.03
SHF-201ENST00000290894 CHODLQ9H9P2 273 aa15.26■□□□□ 0.03
SHF-201ENST00000290894 CSMD2Q7Z408 3487 aa15.26■□□□□ 0.03
SHF-201ENST00000290894 IGKV1D-37A0A075B6S9 117 aa15.26■□□□□ 0.03
SHF-201ENST00000290894 F6UZH7 168 aa15.26■□□□□ 0.03
SHF-201ENST00000290894 FSTL3O95633 263 aa15.26■□□□□ 0.03
SHF-201ENST00000290894 PFN1P07737 140 aaKnown RBP15.26■□□□□ 0.03
SHF-201ENST00000290894 ITLN2Q8WWU7 325 aaPredicted RBP15.26■□□□□ 0.03
SHF-201ENST00000290894 OR5B12Q96R08 314 aa15.26■□□□□ 0.03
SHF-201ENST00000290894 CELSR2Q9HCU4 2923 aa15.26■□□□□ 0.03
SHF-201ENST00000290894 A0A0U1RQK1 487 aa15.25■□□□□ 0.03
SHF-201ENST00000290894 INS-IGF2F8WCM5 200 aa15.25■□□□□ 0.03
SHF-201ENST00000290894 LY6LH3BQJ8 138 aa15.25■□□□□ 0.03
SHF-201ENST00000290894 CRYGBP07316 175 aa15.25■□□□□ 0.03
SHF-201ENST00000290894 CDX1P47902 265 aaPredicted RBP15.25■□□□□ 0.03
SHF-201ENST00000290894 COMPP49747 757 aaPredicted RBP15.25■□□□□ 0.03
SHF-201ENST00000290894 RNASEH2CQ8TDP1 164 aaKnown RBP15.25■□□□□ 0.03
SHF-201ENST00000290894 NEU4Q8WWR8 484 aaPredicted RBP15.25■□□□□ 0.03
SHF-201ENST00000290894 TECRQ9NZ01 308 aaKnown RBP15.25■□□□□ 0.03
SHF-201ENST00000290894 VENTXO95231 258 aa15.25■□□□□ 0.03
SHF-201ENST00000290894 HTR1DP28221 377 aa15.25■□□□□ 0.03
SHF-201ENST00000290894 MMDQ15546 238 aa15.25■□□□□ 0.03
SHF-201ENST00000290894 PDZD11Q5EBL8 140 aa15.25■□□□□ 0.03
SHF-201ENST00000290894 OCC1Q8TAD7 63 aa15.25■□□□□ 0.03
SHF-201ENST00000290894 GSN-AS1Q9NRJ2 163 aa15.25■□□□□ 0.03
SHF-201ENST00000290894 TRBV24-1A0A075B6N3 115 aa15.24■□□□□ 0.03
SHF-201ENST00000290894 IFITM10A6NMD0 228 aa15.24■□□□□ 0.03
SHF-201ENST00000290894 FABP1P07148 127 aa15.24■□□□□ 0.03
SHF-201ENST00000290894 OR5G3P0C626 314 aa15.24■□□□□ 0.03
SHF-201ENST00000290894 TRGC1P0CF51 173 aa15.24■□□□□ 0.03
SHF-201ENST00000290894 PYYP10082 97 aa15.24■□□□□ 0.03
SHF-201ENST00000290894 ZFP36P26651 326 aaKnown RBP15.24■□□□□ 0.03
SHF-201ENST00000290894 OR4X1Q8NH49 305 aa15.24■□□□□ 0.03
SHF-201ENST00000290894 FAM103A1Q9BTL3 118 aaKnown RBP15.24■□□□□ 0.03
SHF-201ENST00000290894 AMMECR1Q9Y4X0 333 aaPredicted RBP15.24■□□□□ 0.03
SHF-201ENST00000290894 RBP4P02753 201 aa15.24■□□□□ 0.03
SHF-201ENST00000290894 CRYBB3P26998 211 aa15.24■□□□□ 0.03
SHF-201ENST00000290894 SSX2Q16385 188 aa15.24■□□□□ 0.03
SHF-201ENST00000290894 TPTE2P1Q5T6R2 138 aa15.24■□□□□ 0.03
SHF-201ENST00000290894 GFI1BQ5VTD9 330 aa15.24■□□□□ 0.03
SHF-201ENST00000290894 DTX2Q86UW9 622 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms