RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 GTSF1LQ9H1H1 148 aa3.7□□□□□ -1.82
NCOA1-201ENST00000288599 R4GMQ9 66 aa3.7□□□□□ -1.82
NCOA1-201ENST00000288599 PTPRDP23468 1912 aa3.7□□□□□ -1.82
NCOA1-201ENST00000288599 A0A1B0GTI1 187 aa3.7□□□□□ -1.82
NCOA1-201ENST00000288599 H3BQ15 152 aa3.7□□□□□ -1.82
NCOA1-201ENST00000288599 MGST3O14880 152 aa3.7□□□□□ -1.82
NCOA1-201ENST00000288599 HIST1H1DP16402 221 aaKnown RBP3.7□□□□□ -1.82
NCOA1-201ENST00000288599 CD300CQ08708 224 aa3.7□□□□□ -1.82
NCOA1-201ENST00000288599 NPIPB3Q92617 1050 aa3.7□□□□□ -1.82
NCOA1-201ENST00000288599 NEU3Q9UQ49 428 aa3.7□□□□□ -1.82
NCOA1-201ENST00000288599 PCM1Q15154 2024 aa3.7□□□□□ -1.82
NCOA1-201ENST00000288599 RPS11P62280 158 aaKnown RBP eCLIP3.69□□□□□ -1.82
NCOA1-201ENST00000288599 MST1LQ2TV78 715 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 SPACA3Q8IXA5 215 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 MYEOVQ96EZ4 313 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 SPCS1Q9Y6A9 102 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 SMAD5-AS1Q9Y6J3 95 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 NINQ8N4C6 2090 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 NKX2-6A6NCS4 301 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 PRSS29PA6NIE9 313 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 PROP1O75360 226 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 ADMP35318 185 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 UBE2E1P51965 193 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 EFNA4P52798 201 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 HIKESHIQ53FT3 197 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 CLLU1OSQ5K130 101 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 GFI1BQ5VTD9 330 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 ARIH2OSQ8N7S6 290 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 ZNF625Q96I27 306 aaPredicted RBP3.69□□□□□ -1.82
NCOA1-201ENST00000288599 DUSP15Q9H1R2 295 aaPredicted RBP3.69□□□□□ -1.82
NCOA1-201ENST00000288599 PRDM6Q9NQX0 595 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 TREX1Q9NSU2 369 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 MRPL36Q9P0J6 103 aaKnown RBP3.69□□□□□ -1.82
NCOA1-201ENST00000288599 FOXA2Q9Y261 457 aaPredicted RBP3.69□□□□□ -1.82
NCOA1-201ENST00000288599 NLRC5Q86WI3 1866 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 ZNF236Q9UL36 1845 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 VCYO14598 125 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 ZIC3O60481 467 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 CXorf1O96002 111 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 MOSP00540 346 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 LINC00614P0C842 121 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 COX5BP10606 129 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 CCL3L1P16619 93 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 FUSP35637 526 aaKnown RBP eCLIP3.69□□□□□ -1.82
NCOA1-201ENST00000288599 GLRX5Q86SX6 157 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 WFDC9Q8NEX5 89 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 OR52E5Q8NH55 327 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 TM4SF18Q96CE8 201 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 IGHV3-64A0A075B6Q5 118 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 A0A0J9YW62 118 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 LINC01619G3V211 115 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 M0R2P5 195 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 OVOL1O14753 267 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 NBL1P41271 181 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 LINC01551Q86U37 167 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 TEX37Q96LM6 180 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 TMEM30AQ9NV96 361 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 TRPM7Q96QT4 1865 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 CROCCQ5TZA2 2017 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 TRAV24A0A0B4J272 114 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 SPTY2D1-AS1A0A0U1RR47 76 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 C9orf170A2RU37 121 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 IFITM5A6NNB3 132 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 PATE3B3GLJ2 98 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 F8VVB4 439 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 F8VWA3 439 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 PSG4Q00888 419 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 C1QL2Q7Z5L3 287 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 ORMDL3Q8N138 153 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 UMODL1-AS1Q8N2C9 162 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 OR11H6Q8NGC7 330 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 MGST2Q99735 147 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 PLSCR4Q9NRQ2 329 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 HS3ST2Q9Y278 367 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 TRBV25-1A0A075B6N4 114 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 TRAV3A0A0B4J244 114 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 IGHV1OR15-9A0A0B4J2B8 117 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 H0Y9J4 135 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 BUB1B-PAK6H3BSN5 160 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 NDUFS7O75251 213 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 HSPB1P04792 205 aaKnown RBP3.69□□□□□ -1.82
NCOA1-201ENST00000288599 HOXB1P14653 301 aaPredicted RBP3.69□□□□□ -1.82
NCOA1-201ENST00000288599 PRTN3P24158 256 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 UBE2V2Q15819 145 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 CCSMST1Q4G0I0 132 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 LINC00479Q96M42 142 aa3.69□□□□□ -1.82
NCOA1-201ENST00000288599 SF3B5Q9BWJ5 86 aaKnown RBP3.69□□□□□ -1.82
NCOA1-201ENST00000288599 TRBV5-4A0A0C4DH59 114 aa3.68□□□□□ -1.82
NCOA1-201ENST00000288599 NPSP0C0P6 89 aa3.68□□□□□ -1.82
NCOA1-201ENST00000288599 PATE4P0C8F1 98 aa3.68□□□□□ -1.82
NCOA1-201ENST00000288599 CCL3P10147 92 aa3.68□□□□□ -1.82
NCOA1-201ENST00000288599 CCL4P13236 92 aa3.68□□□□□ -1.82
NCOA1-201ENST00000288599 SSTR5P35346 364 aa3.68□□□□□ -1.82
NCOA1-201ENST00000288599 PMCHL1Q16048 86 aa3.68□□□□□ -1.82
NCOA1-201ENST00000288599 POU2AF1Q16633 256 aa3.68□□□□□ -1.82
NCOA1-201ENST00000288599 SH2D6Q7Z4S9 175 aa3.68□□□□□ -1.82
NCOA1-201ENST00000288599 OR2H1Q9GZK4 316 aa3.68□□□□□ -1.82
NCOA1-201ENST00000288599 PTPRZ1P23471 2315 aaPredicted RBP3.68□□□□□ -1.82
NCOA1-201ENST00000288599 NUP205Q92621 2012 aa3.68□□□□□ -1.82
NCOA1-201ENST00000288599 A0A0U1RQV5 110 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms