RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 SPSB3Q6PJ21 355 aa6.9□□□□□ -1.3
HMGN1-201ENST00000288344 LINC00322Q6ZN03 302 aaPredicted RBP6.9□□□□□ -1.3
HMGN1-201ENST00000288344 LGI3Q8N145 548 aa6.9□□□□□ -1.3
HMGN1-201ENST00000288344 RRNAD1Q96FB5 475 aaKnown RBP6.9□□□□□ -1.3
HMGN1-201ENST00000288344 BSCL2Q96G97 398 aaPredicted RBP6.9□□□□□ -1.3
HMGN1-201ENST00000288344 OR10C1Q96KK4 312 aa6.9□□□□□ -1.3
HMGN1-201ENST00000288344 C16orf92Q96LL3 132 aa6.9□□□□□ -1.3
HMGN1-201ENST00000288344 OR4C12Q96R67 309 aa6.9□□□□□ -1.3
HMGN1-201ENST00000288344 B9D2Q9BPU9 175 aa6.9□□□□□ -1.3
HMGN1-201ENST00000288344 ELOVL1Q9BW60 279 aa6.9□□□□□ -1.3
HMGN1-201ENST00000288344 HINT2Q9BX68 163 aa6.9□□□□□ -1.3
HMGN1-201ENST00000288344 C21orf62Q9NYP8 219 aa6.9□□□□□ -1.3
HMGN1-201ENST00000288344 TBC1D24Q9ULP9 559 aa6.9□□□□□ -1.3
HMGN1-201ENST00000288344 IGHV3-21A0A0B4J1V1 117 aa6.89□□□□□ -1.31
HMGN1-201ENST00000288344 A0A1B0GU03 582 aa6.89□□□□□ -1.31
HMGN1-201ENST00000288344 DUXBA0A1W2PPF3 345 aa6.89□□□□□ -1.31
HMGN1-201ENST00000288344 C9orf170A2RU37 121 aa6.89□□□□□ -1.31
HMGN1-201ENST00000288344 K7EMT4 169 aa6.89□□□□□ -1.31
HMGN1-201ENST00000288344 NXPH3O95157 252 aa6.89□□□□□ -1.31
HMGN1-201ENST00000288344 MT-CO2P00403 227 aa6.89□□□□□ -1.31
HMGN1-201ENST00000288344 GPR183P32249 361 aa6.89□□□□□ -1.31
HMGN1-201ENST00000288344 TNFRSF9Q07011 255 aa6.89□□□□□ -1.31
HMGN1-201ENST00000288344 TATDN3Q17R31 274 aa6.89□□□□□ -1.31
HMGN1-201ENST00000288344 ZNF57Q68EA5 555 aaPredicted RBP6.89□□□□□ -1.31
HMGN1-201ENST00000288344 TMEM190Q8WZ59 177 aa6.89□□□□□ -1.31
HMGN1-201ENST00000288344 CCDC32Q9BV29 185 aa6.89□□□□□ -1.31
HMGN1-201ENST00000288344 PLEKHA3Q9HB20 300 aa6.89□□□□□ -1.31
HMGN1-201ENST00000288344 MLXQ9UH92 298 aa6.89□□□□□ -1.31
HMGN1-201ENST00000288344 SACSQ9NZJ4 4579 aa6.89□□□□□ -1.31
HMGN1-201ENST00000288344 CSMD3Q7Z407 3707 aa6.88□□□□□ -1.31
HMGN1-201ENST00000288344 OR2T8A6NH00 312 aa6.88□□□□□ -1.31
HMGN1-201ENST00000288344 MPTX1A8MV57 137 aa6.88□□□□□ -1.31
HMGN1-201ENST00000288344 NDUFA4O00483 81 aa6.88□□□□□ -1.31
HMGN1-201ENST00000288344 SCGB1D2O95969 90 aa6.88□□□□□ -1.31
HMGN1-201ENST00000288344 IFNA17P01571 189 aa6.88□□□□□ -1.31
HMGN1-201ENST00000288344 IGKV1-17P01599 117 aa6.88□□□□□ -1.31
HMGN1-201ENST00000288344 IGHV3-48P01763 117 aa6.88□□□□□ -1.31
HMGN1-201ENST00000288344 SULT1A3P0DMM9 295 aa6.88□□□□□ -1.31
HMGN1-201ENST00000288344 SULT1A4P0DMN0 295 aa6.88□□□□□ -1.31
HMGN1-201ENST00000288344 MFAP4P55083 255 aa6.88□□□□□ -1.31
HMGN1-201ENST00000288344 DHRS2Q13268 280 aa6.88□□□□□ -1.31
HMGN1-201ENST00000288344 SMCO1Q147U7 214 aa6.88□□□□□ -1.31
HMGN1-201ENST00000288344 CD300EQ496F6 205 aaPredicted RBP6.88□□□□□ -1.31
HMGN1-201ENST00000288344 PLET1Q6UQ28 207 aa6.88□□□□□ -1.31
HMGN1-201ENST00000288344 TMED4Q7Z7H5 227 aa6.88□□□□□ -1.31
HMGN1-201ENST00000288344 CENPSQ8N2Z9 138 aa6.88□□□□□ -1.31
HMGN1-201ENST00000288344 OR2K2Q8NGT1 345 aa6.88□□□□□ -1.31
HMGN1-201ENST00000288344 OR4X1Q8NH49 305 aa6.88□□□□□ -1.31
HMGN1-201ENST00000288344 PTTG2Q9NZH5 202 aa6.88□□□□□ -1.31
HMGN1-201ENST00000288344 PEMTQ9UBM1 199 aa6.88□□□□□ -1.31
HMGN1-201ENST00000288344 TMED3Q9Y3Q3 217 aa6.88□□□□□ -1.31
HMGN1-201ENST00000288344 DYNC2H1Q8NCM8 4307 aaKnown RBP6.88□□□□□ -1.31
HMGN1-201ENST00000288344 IGHV3-35A0A0C4DH35 117 aa6.87□□□□□ -1.31
HMGN1-201ENST00000288344 C15orf62A8K5M9 175 aa6.87□□□□□ -1.31
HMGN1-201ENST00000288344 PRSS46E5RG02 174 aa6.87□□□□□ -1.31
HMGN1-201ENST00000288344 CYB5BO43169 146 aa6.87□□□□□ -1.31
HMGN1-201ENST00000288344 LYRM1O43325 122 aa6.87□□□□□ -1.31
HMGN1-201ENST00000288344 TCRBP04435 133 aa6.87□□□□□ -1.31
HMGN1-201ENST00000288344 OR4E1P0C645 316 aa6.87□□□□□ -1.31
HMGN1-201ENST00000288344 ANXA7P20073 488 aaKnown RBP6.87□□□□□ -1.31
HMGN1-201ENST00000288344 HTR2BP41595 481 aa6.87□□□□□ -1.31
HMGN1-201ENST00000288344 SRPXP78539 464 aa6.87□□□□□ -1.31
HMGN1-201ENST00000288344 ODF1Q14990 250 aa6.87□□□□□ -1.31
HMGN1-201ENST00000288344 FAM106AQ4KMX7 169 aa6.87□□□□□ -1.31
HMGN1-201ENST00000288344 TRIQKQ629K1 86 aa6.87□□□□□ -1.31
HMGN1-201ENST00000288344 FAM90A2PQ658T7 463 aa6.87□□□□□ -1.31
HMGN1-201ENST00000288344 UXS1Q8NBZ7 420 aa6.87□□□□□ -1.31
HMGN1-201ENST00000288344 TMEM116Q8NCL8 245 aa6.87□□□□□ -1.31
HMGN1-201ENST00000288344 MITD1Q8WV92 249 aa6.87□□□□□ -1.31
HMGN1-201ENST00000288344 CACNG8Q8WXS5 425 aa6.87□□□□□ -1.31
HMGN1-201ENST00000288344 MARC2Q969Z3 335 aa6.87□□□□□ -1.31
HMGN1-201ENST00000288344 BATF3Q9NR55 127 aa6.87□□□□□ -1.31
HMGN1-201ENST00000288344 TECRQ9NZ01 308 aaKnown RBP6.87□□□□□ -1.31
HMGN1-201ENST00000288344 MRPL27Q9P0M9 148 aaKnown RBP6.87□□□□□ -1.31
HMGN1-201ENST00000288344 CACFD1Q9UGQ2 172 aa6.87□□□□□ -1.31
HMGN1-201ENST00000288344 LINC00854A0A1B0GVQ3 168 aa6.86□□□□□ -1.31
HMGN1-201ENST00000288344 FAM90A26D6RGX4 464 aa6.86□□□□□ -1.31
HMGN1-201ENST00000288344 CLN5O75503 358 aa6.86□□□□□ -1.31
HMGN1-201ENST00000288344 ANXA3P12429 323 aa6.86□□□□□ -1.31
HMGN1-201ENST00000288344 SNCAP37840 140 aa6.86□□□□□ -1.31
HMGN1-201ENST00000288344 PAX9P55771 341 aa6.86□□□□□ -1.31
HMGN1-201ENST00000288344 ATP5IP56385 69 aaPredicted RBP6.86□□□□□ -1.31
HMGN1-201ENST00000288344 IL15RAQ13261 267 aa6.86□□□□□ -1.31
HMGN1-201ENST00000288344 ASAH1Q13510 395 aa6.86□□□□□ -1.31
HMGN1-201ENST00000288344 DEFB121Q5J5C9 76 aa6.86□□□□□ -1.31
HMGN1-201ENST00000288344 GGNBP1Q5YKI7 109 aa6.86□□□□□ -1.31
HMGN1-201ENST00000288344 PRSS54Q6PEW0 395 aa6.86□□□□□ -1.31
HMGN1-201ENST00000288344 LYG2Q86SG7 212 aa6.86□□□□□ -1.31
HMGN1-201ENST00000288344 TMEM61Q8N0U2 210 aa6.86□□□□□ -1.31
HMGN1-201ENST00000288344 DUSP18Q8NEJ0 188 aa6.86□□□□□ -1.31
HMGN1-201ENST00000288344 OR4D5Q8NGN0 318 aa6.86□□□□□ -1.31
HMGN1-201ENST00000288344 RNASEH2CQ8TDP1 164 aaKnown RBP6.86□□□□□ -1.31
HMGN1-201ENST00000288344 S100ZQ8WXG8 99 aa6.86□□□□□ -1.31
HMGN1-201ENST00000288344 RBKSQ9H477 322 aa6.86□□□□□ -1.31
HMGN1-201ENST00000288344 GAR1Q9NY12 217 aaKnown RBP6.86□□□□□ -1.31
HMGN1-201ENST00000288344 U3KQ87 197 aa6.86□□□□□ -1.31
HMGN1-201ENST00000288344 IGKV1D-37A0A075B6S9 117 aa6.85□□□□□ -1.31
HMGN1-201ENST00000288344 PMS2P5A8MQ11 134 aa6.85□□□□□ -1.31
HMGN1-201ENST00000288344 CORTO00230 105 aa6.85□□□□□ -1.31
HMGN1-201ENST00000288344 ADAP1O75689 374 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms