RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 M0R381 172 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 CD7P09564 240 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 CXCL12P48061 93 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 IBA57Q5T440 356 aaKnown RBP2.03□□□□□ -2.08
CHD1-201ENST00000284049 ZC2HC1BQ5TFG8 222 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 C1orf174Q8IYL3 243 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 C12orf57Q99622 126 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 IMUPQ9GZP8 106 aa2.03□□□□□ -2.08
CHD1-201ENST00000284049 F11RQ9Y624 299 aaKnown RBP2.03□□□□□ -2.08
CHD1-201ENST00000284049 IGLV3-10A0A075B6K4 115 aa2.03□□□□□ -2.09
CHD1-201ENST00000284049 C5orf63A6NC05 138 aa2.03□□□□□ -2.09
CHD1-201ENST00000284049 C8orf87E5RJ46 101 aa2.03□□□□□ -2.09
CHD1-201ENST00000284049 FFAR1O14842 300 aa2.03□□□□□ -2.09
CHD1-201ENST00000284049 SLC25A20O43772 301 aa2.03□□□□□ -2.09
CHD1-201ENST00000284049 LGALS1P09382 135 aaKnown RBP2.03□□□□□ -2.09
CHD1-201ENST00000284049 C16orf72Q14CZ0 275 aa2.03□□□□□ -2.09
CHD1-201ENST00000284049 SMIM21Q3B7S5 101 aa2.03□□□□□ -2.09
CHD1-201ENST00000284049 MESTQ5EB52 335 aa2.03□□□□□ -2.09
CHD1-201ENST00000284049 C8orf59Q8N0T1 100 aaPredicted RBP2.03□□□□□ -2.09
CHD1-201ENST00000284049 ACBD7Q8N6N7 88 aa2.03□□□□□ -2.09
CHD1-201ENST00000284049 OR5P3Q8WZ94 311 aa2.03□□□□□ -2.09
CHD1-201ENST00000284049 CMBLQ96DG6 245 aa2.03□□□□□ -2.09
CHD1-201ENST00000284049 DOHHQ9BU89 302 aa2.03□□□□□ -2.09
CHD1-201ENST00000284049 URB1O60287 2271 aaKnown RBP2.03□□□□□ -2.09
CHD1-201ENST00000284049 SCN1AP35498 2009 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 KMT2EQ8IZD2 1858 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 CACNA1AO00555 2505 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 IGHV1-45A0A0A0MS14 117 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 NAPSAO96009 420 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 LINC00869P0C866 280 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 ZNF286BP0CG31 522 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 IGLV3-21P80748 117 aaPredicted RBP2.02□□□□□ -2.09
CHD1-201ENST00000284049 FBXL19-AS1Q494R0 122 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 SSX8Q7RTT4 187 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 FAM19A3Q7Z5A8 133 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 OR5J2Q8NH18 312 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 C7orf33Q8WU49 177 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 GPR146Q96CH1 333 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 OR2A5Q96R48 311 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 ZNF286AQ9HBT8 521 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 HSPB8Q9UJY1 196 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 SCN8AQ9UQD0 1980 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 TTRP02766 147 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 NPY1RP25929 384 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 ZNF140P52738 457 aaPredicted RBP2.02□□□□□ -2.09
CHD1-201ENST00000284049 NANOS3P60323 173 aaKnown RBP2.02□□□□□ -2.09
CHD1-201ENST00000284049 GTF2H5Q6ZYL4 71 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 NEGR1Q7Z3B1 354 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 EFCAB1Q9HAE3 211 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 TRIOBPQ9H2D6 2365 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 PDE4DIPQ5VU43 2346 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 PRORSD1PA6NEY8 169 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 TP53I11O14683 189 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 LY6G6DO95868 133 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 BLVRBP30043 206 aaPredicted RBP2.02□□□□□ -2.09
CHD1-201ENST00000284049 NANOS2P60321 138 aaKnown RBP2.02□□□□□ -2.09
CHD1-201ENST00000284049 BSPH1Q075Z2 132 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 RTL8BQ17RB0 113 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 RASL11AQ6T310 242 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 DEDD2Q8WXF8 326 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 RTL8AQ9BWD3 113 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 TRAV36DV7A0A075B6V5 113 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 A0A1B0GUV1 79 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 IGLL5B9A064 214 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 CDS2O95674 445 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 NFYBP25208 207 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 LYZP61626 148 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 RFLNAQ6ZTI6 216 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 AMN1Q8IY45 258 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 SLC22A24Q8N4F4 322 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 RTN4IP1Q8WWV3 396 aaPredicted RBP2.02□□□□□ -2.09
CHD1-201ENST00000284049 LXNQ9BS40 222 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 SHANK2-AS3Q9BTD1 123 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 NKX2-6A6NCS4 301 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 COX7A2LO14548 114 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 SNAPC5O75971 98 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 IGHV3-11P01762 117 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 IGHV1-8P0DP01 117 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 COPZ1P61923 177 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 LTC4SQ16873 150 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 LAIR2Q6ISS4 152 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 ZNF429Q86V71 674 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 OR13C4Q8NGS5 318 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 FAM57AQ8TBR7 257 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 FGF13Q92913 245 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 CHST6Q9GZX3 395 aa2.02□□□□□ -2.09
CHD1-201ENST00000284049 ZNF230Q9UIE0 474 aaPredicted RBP2.02□□□□□ -2.09
CHD1-201ENST00000284049 TRAV26-2A0A0B4J265 109 aa2.01□□□□□ -2.09
CHD1-201ENST00000284049 OR2T1O43869 369 aa2.01□□□□□ -2.09
CHD1-201ENST00000284049 OXTP01178 125 aa2.01□□□□□ -2.09
CHD1-201ENST00000284049 IFNA17P01571 189 aa2.01□□□□□ -2.09
CHD1-201ENST00000284049 MT-ND6P03923 174 aa2.01□□□□□ -2.09
CHD1-201ENST00000284049 HINT1P49773 126 aaPredicted RBP2.01□□□□□ -2.09
CHD1-201ENST00000284049 WNT4P56705 351 aa2.01□□□□□ -2.09
CHD1-201ENST00000284049 AADACL3Q5VUY0 350 aa2.01□□□□□ -2.09
CHD1-201ENST00000284049 GLYATQ6IB77 296 aa2.01□□□□□ -2.09
CHD1-201ENST00000284049 Q6ZS49 121 aa2.01□□□□□ -2.09
CHD1-201ENST00000284049 SHISA6Q6ZSJ9 500 aa2.01□□□□□ -2.09
CHD1-201ENST00000284049 ZNF695Q8IW36 515 aa2.01□□□□□ -2.09
CHD1-201ENST00000284049 PDZD9Q8IXQ8 264 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms