RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 LYL1P12980 280 aa10.76□□□□□ -0.69
HMGN3-201ENST00000275036 SPCS3P61009 180 aa10.76□□□□□ -0.69
HMGN3-201ENST00000275036 RELQ04864 619 aaPredicted RBP10.76□□□□□ -0.69
HMGN3-201ENST00000275036 OR52E5Q8NH55 327 aa10.76□□□□□ -0.69
HMGN3-201ENST00000275036 EPPK1P58107 5090 aaKnown RBP10.76□□□□□ -0.69
HMGN3-201ENST00000275036 IGHV3-49A0A0A0MS15 119 aa10.75□□□□□ -0.69
HMGN3-201ENST00000275036 IGHV7-4-1A0A0J9YVY3 117 aa10.75□□□□□ -0.69
HMGN3-201ENST00000275036 ZNF701M0R085 212 aaPredicted RBP10.75□□□□□ -0.69
HMGN3-201ENST00000275036 CHEK1O14757 476 aa10.75□□□□□ -0.69
HMGN3-201ENST00000275036 YIF1AO95070 293 aa10.75□□□□□ -0.69
HMGN3-201ENST00000275036 NXPH3O95157 252 aa10.75□□□□□ -0.69
HMGN3-201ENST00000275036 TMEM50AO95807 157 aa10.75□□□□□ -0.69
HMGN3-201ENST00000275036 AKR1C4P17516 323 aa10.75□□□□□ -0.69
HMGN3-201ENST00000275036 DUSP18Q8NEJ0 188 aa10.75□□□□□ -0.69
HMGN3-201ENST00000275036 IL22RA2Q969J5 263 aa10.75□□□□□ -0.69
HMGN3-201ENST00000275036 SPAG8Q99932 426 aaPredicted RBP10.75□□□□□ -0.69
HMGN3-201ENST00000275036 ENY2Q9NPA8 101 aa10.75□□□□□ -0.69
HMGN3-201ENST00000275036 SMPXQ9UHP9 88 aa10.75□□□□□ -0.69
HMGN3-201ENST00000275036 IGHV3OR16-13A0A075B7E8 117 aa10.74□□□□□ -0.69
HMGN3-201ENST00000275036 IGHV3-74A0A0B4J1X5 117 aa10.74□□□□□ -0.69
HMGN3-201ENST00000275036 S100A5P33763 92 aa10.74□□□□□ -0.69
HMGN3-201ENST00000275036 NPBWR1P48145 328 aa10.74□□□□□ -0.69
HMGN3-201ENST00000275036 SUB1P53999 127 aaKnown RBP eCLIP10.74□□□□□ -0.69
HMGN3-201ENST00000275036 ANKRD55Q3KP44 614 aa10.74□□□□□ -0.69
HMGN3-201ENST00000275036 NMSQ5H8A3 153 aa10.74□□□□□ -0.69
HMGN3-201ENST00000275036 TOMM20LQ6UXN7 152 aa10.74□□□□□ -0.69
HMGN3-201ENST00000275036 LYZL2Q7Z4W2 148 aa10.74□□□□□ -0.69
HMGN3-201ENST00000275036 TOMM5Q8N4H5 51 aa10.74□□□□□ -0.69
HMGN3-201ENST00000275036 TMEM170AQ8WVE7 144 aa10.74□□□□□ -0.69
HMGN3-201ENST00000275036 SCGB3A2Q96PL1 93 aa10.74□□□□□ -0.69
HMGN3-201ENST00000275036 RNF2Q99496 336 aa10.74□□□□□ -0.69
HMGN3-201ENST00000275036 RHPN1-AS1Q9BWJ2 59 aa10.74□□□□□ -0.69
HMGN3-201ENST00000275036 ZFAND3Q9H8U3 227 aa10.74□□□□□ -0.69
HMGN3-201ENST00000275036 UBQLN2Q9UHD9 624 aa10.74□□□□□ -0.69
HMGN3-201ENST00000275036 KCNIP3Q9Y2W7 256 aa10.74□□□□□ -0.69
HMGN3-201ENST00000275036 A0A1B0GU03 582 aa10.73□□□□□ -0.69
HMGN3-201ENST00000275036 CORTO00230 105 aa10.73□□□□□ -0.69
HMGN3-201ENST00000275036 OPRK1P41145 380 aa10.73□□□□□ -0.69
HMGN3-201ENST00000275036 ODF3L2Q3SX64 289 aa10.73□□□□□ -0.69
HMGN3-201ENST00000275036 LAMTOR1Q6IAA8 161 aa10.73□□□□□ -0.69
HMGN3-201ENST00000275036 TMEM116Q8NCL8 245 aa10.73□□□□□ -0.69
HMGN3-201ENST00000275036 SRRQ9GZT4 340 aa10.73□□□□□ -0.69
HMGN3-201ENST00000275036 HEYLQ9NQ87 328 aaPredicted RBP10.73□□□□□ -0.69
HMGN3-201ENST00000275036 TRAV14DV4A0A0A6YYC5 116 aa10.72□□□□□ -0.69
HMGN3-201ENST00000275036 A0A0B4J2A0 478 aa10.72□□□□□ -0.69
HMGN3-201ENST00000275036 CEBPZOSA8MTT3 80 aa10.72□□□□□ -0.69
HMGN3-201ENST00000275036 CLN5O75503 358 aa10.72□□□□□ -0.69
HMGN3-201ENST00000275036 APOHP02749 345 aaPredicted RBP10.72□□□□□ -0.69
HMGN3-201ENST00000275036 SULT1A3P0DMM9 295 aa10.72□□□□□ -0.69
HMGN3-201ENST00000275036 SULT1A4P0DMN0 295 aa10.72□□□□□ -0.69
HMGN3-201ENST00000275036 FAUP35544 74 aaKnown RBP10.72□□□□□ -0.69
HMGN3-201ENST00000275036 HTR2BP41595 481 aa10.72□□□□□ -0.69
HMGN3-201ENST00000275036 AP3S2P59780 193 aa10.72□□□□□ -0.69
HMGN3-201ENST00000275036 C2orf83Q53S99 150 aa10.72□□□□□ -0.69
HMGN3-201ENST00000275036 FAM90A2PQ658T7 463 aa10.72□□□□□ -0.69
HMGN3-201ENST00000275036 ZNF600Q6ZNG1 722 aa10.72□□□□□ -0.69
HMGN3-201ENST00000275036 TMED4Q7Z7H5 227 aa10.72□□□□□ -0.69
HMGN3-201ENST00000275036 LILRB2Q8N423 598 aa10.72□□□□□ -0.69
HMGN3-201ENST00000275036 OR4X1Q8NH49 305 aa10.72□□□□□ -0.69
HMGN3-201ENST00000275036 SHPKQ9UHJ6 478 aa10.72□□□□□ -0.69
HMGN3-201ENST00000275036 PUS1Q9Y606 427 aaKnown RBP eCLIP10.72□□□□□ -0.69
HMGN3-201ENST00000275036 AGRNO00468 2067 aa10.72□□□□□ -0.69
HMGN3-201ENST00000275036 SLC24A4Q8NFF2 622 aa10.71□□□□□ -0.69
HMGN3-201ENST00000275036 ST8SIA2Q92186 375 aa10.71□□□□□ -0.69
HMGN3-201ENST00000275036 GGTLC1Q9BX51 225 aa10.71□□□□□ -0.69
HMGN3-201ENST00000275036 IGKV3-7A0A075B6H7 116 aa10.7□□□□□ -0.7
HMGN3-201ENST00000275036 LOC102724200A0A096LPH7 203 aaPredicted RBP10.7□□□□□ -0.7
HMGN3-201ENST00000275036 IGKV1-17P01599 117 aa10.7□□□□□ -0.7
HMGN3-201ENST00000275036 CCR6P51684 374 aa10.7□□□□□ -0.7
HMGN3-201ENST00000275036 TNFRSF9Q07011 255 aa10.7□□□□□ -0.7
HMGN3-201ENST00000275036 SMCO1Q147U7 214 aa10.7□□□□□ -0.7
HMGN3-201ENST00000275036 BAK1Q16611 211 aa10.7□□□□□ -0.7
HMGN3-201ENST00000275036 TIGITQ495A1 244 aa10.7□□□□□ -0.7
HMGN3-201ENST00000275036 TMEM128Q5BJH2 165 aa10.7□□□□□ -0.7
HMGN3-201ENST00000275036 PRSS54Q6PEW0 395 aa10.7□□□□□ -0.7
HMGN3-201ENST00000275036 LGI3Q8N145 548 aa10.7□□□□□ -0.7
HMGN3-201ENST00000275036 SDHCQ99643 169 aaPredicted RBP10.7□□□□□ -0.7
HMGN3-201ENST00000275036 GINS3Q9BRX5 216 aa10.7□□□□□ -0.7
HMGN3-201ENST00000275036 VSIRQ9H7M9 311 aa10.7□□□□□ -0.7
HMGN3-201ENST00000275036 HSPB7Q9UBY9 170 aa10.7□□□□□ -0.7
HMGN3-201ENST00000275036 ALMS1Q8TCU4 4167 aa10.69□□□□□ -0.7
HMGN3-201ENST00000275036 IGHV3-66A0A0C4DH42 116 aa10.69□□□□□ -0.7
HMGN3-201ENST00000275036 LCE6AA0A183 80 aa10.69□□□□□ -0.7
HMGN3-201ENST00000275036 OR4C46A6NHA9 309 aa10.69□□□□□ -0.7
HMGN3-201ENST00000275036 ANXA3P12429 323 aa10.69□□□□□ -0.7
HMGN3-201ENST00000275036 NPY1RP25929 384 aa10.69□□□□□ -0.7
HMGN3-201ENST00000275036 ZNF124Q15973 351 aa10.69□□□□□ -0.7
HMGN3-201ENST00000275036 SPANXN2Q5MJ10 180 aa10.69□□□□□ -0.7
HMGN3-201ENST00000275036 DEDD2Q8WXF8 326 aa10.69□□□□□ -0.7
HMGN3-201ENST00000275036 SLC25A21Q9BQT8 299 aaPredicted RBP10.69□□□□□ -0.7
HMGN3-201ENST00000275036 RBKSQ9H477 322 aa10.69□□□□□ -0.7
HMGN3-201ENST00000275036 PITX3O75364 302 aa10.68□□□□□ -0.7
HMGN3-201ENST00000275036 IGLC1P0CG04 106 aa10.68□□□□□ -0.7
HMGN3-201ENST00000275036 TFPI2P48307 235 aa10.68□□□□□ -0.7
HMGN3-201ENST00000275036 RND2P52198 227 aa10.68□□□□□ -0.7
HMGN3-201ENST00000275036 SRPXP78539 464 aa10.68□□□□□ -0.7
HMGN3-201ENST00000275036 PPP1R1AQ13522 171 aa10.68□□□□□ -0.7
HMGN3-201ENST00000275036 TCF24Q7RTU0 167 aa10.68□□□□□ -0.7
HMGN3-201ENST00000275036 APRG1Q8IVJ8 170 aa10.68□□□□□ -0.7
HMGN3-201ENST00000275036 GBGT1Q8N5D6 347 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms