RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 IGLC7A0M8Q6 106 aa19.42■□□□□ 0.7
SSBP4-201ENST00000270061 HES1Q14469 280 aa19.42■□□□□ 0.7
SSBP4-201ENST00000270061 HNF4GQ14541 408 aa19.42■□□□□ 0.7
SSBP4-201ENST00000270061 ARSJQ5FYB0 599 aaPredicted RBP19.42■□□□□ 0.7
SSBP4-201ENST00000270061 ZNF709Q8N972 641 aa19.42■□□□□ 0.7
SSBP4-201ENST00000270061 ZNF114Q8NC26 417 aa19.42■□□□□ 0.7
SSBP4-201ENST00000270061 WNK1Q9H4A3 2382 aa19.42■□□□□ 0.7
SSBP4-201ENST00000270061 LSM4Q9Y4Z0 139 aaKnown RBP19.42■□□□□ 0.7
SSBP4-201ENST00000270061 TSPAN15O95858 294 aa19.41■□□□□ 0.7
SSBP4-201ENST00000270061 OR13C7P0DN81 318 aa19.41■□□□□ 0.7
SSBP4-201ENST00000270061 BRS3P32247 399 aa19.41■□□□□ 0.7
SSBP4-201ENST00000270061 PROK1P58294 105 aa19.41■□□□□ 0.7
SSBP4-201ENST00000270061 SSBP2P81877 361 aaPredicted RBP19.41■□□□□ 0.7
SSBP4-201ENST00000270061 PLGLAQ15195 96 aa19.41■□□□□ 0.7
SSBP4-201ENST00000270061 PVRIGQ6DKI7 326 aa19.41■□□□□ 0.7
SSBP4-201ENST00000270061 RPRMQ9NS64 109 aa19.41■□□□□ 0.7
SSBP4-201ENST00000270061 FCN1O00602 326 aa19.4■□□□□ 0.7
SSBP4-201ENST00000270061 MBP02144 154 aa19.4■□□□□ 0.7
SSBP4-201ENST00000270061 FAM106CPP0CH98 169 aa19.4■□□□□ 0.7
SSBP4-201ENST00000270061 CD24P25063 80 aa19.4■□□□□ 0.7
SSBP4-201ENST00000270061 GPX4P36969 197 aaPredicted RBP19.4■□□□□ 0.7
SSBP4-201ENST00000270061 TMEM41BQ5BJD5 291 aa19.4■□□□□ 0.7
SSBP4-201ENST00000270061 RNASEH2CQ8TDP1 164 aaKnown RBP19.4■□□□□ 0.7
SSBP4-201ENST00000270061 CACNG8Q8WXS5 425 aa19.4■□□□□ 0.7
SSBP4-201ENST00000270061 KRBOX1C9JBD0 128 aa19.39■□□□□ 0.7
SSBP4-201ENST00000270061 C5orf64Q2M2E5 130 aa19.39■□□□□ 0.7
SSBP4-201ENST00000270061 LFNGQ8NES3 379 aa19.39■□□□□ 0.7
SSBP4-201ENST00000270061 P2RX4Q99571 388 aa19.39■□□□□ 0.7
SSBP4-201ENST00000270061 CITED1Q99966 193 aa19.39■□□□□ 0.7
SSBP4-201ENST00000270061 SMCO3A2RU48 225 aa19.39■□□□□ 0.69
SSBP4-201ENST00000270061 TEX22C9J3V5 150 aa19.39■□□□□ 0.69
SSBP4-201ENST00000270061 H2AFB1P0C5Y9 115 aa19.39■□□□□ 0.69
SSBP4-201ENST00000270061 CD69Q07108 199 aa19.39■□□□□ 0.69
SSBP4-201ENST00000270061 PRR31Q5SQ13 230 aa19.39■□□□□ 0.69
SSBP4-201ENST00000270061 SRSF12Q8WXF0 261 aaKnown RBP19.39■□□□□ 0.69
SSBP4-201ENST00000270061 PITPNC1Q9UKF7 332 aa19.39■□□□□ 0.69
SSBP4-201ENST00000270061 TRAV1-1A0A0B4J248 108 aa19.38■□□□□ 0.69
SSBP4-201ENST00000270061 FBLN7Q53RD9 439 aa19.38■□□□□ 0.69
SSBP4-201ENST00000270061 NPFFR1Q9GZQ6 430 aa19.38■□□□□ 0.69
SSBP4-201ENST00000270061 VSIRQ9H7M9 311 aa19.38■□□□□ 0.69
SSBP4-201ENST00000270061 TMEM11P17152 192 aa19.37■□□□□ 0.69
SSBP4-201ENST00000270061 ZP3P21754 424 aa19.37■□□□□ 0.69
SSBP4-201ENST00000270061 GNB1P62873 340 aa19.37■□□□□ 0.69
SSBP4-201ENST00000270061 ACSM6Q6P461 480 aa19.37■□□□□ 0.69
SSBP4-201ENST00000270061 SPSB3Q6PJ21 355 aa19.37■□□□□ 0.69
SSBP4-201ENST00000270061 TEPPQ6URK8 271 aa19.37■□□□□ 0.69
SSBP4-201ENST00000270061 OPRK1P41145 380 aa19.37■□□□□ 0.69
SSBP4-201ENST00000270061 KRTAP10-3P60369 221 aa19.37■□□□□ 0.69
SSBP4-201ENST00000270061 TMEM144Q7Z5S9 345 aa19.37■□□□□ 0.69
SSBP4-201ENST00000270061 MBD3L1Q8WWY6 194 aa19.37■□□□□ 0.69
SSBP4-201ENST00000270061 MGST2Q99735 147 aa19.37■□□□□ 0.69
SSBP4-201ENST00000270061 VWFP04275 2813 aa19.36■□□□□ 0.69
SSBP4-201ENST00000270061 HBE1P02100 147 aa19.36■□□□□ 0.69
SSBP4-201ENST00000270061 TMEM219Q86XT9 240 aa19.36■□□□□ 0.69
SSBP4-201ENST00000270061 KCNIP2Q9NS61 270 aa19.36■□□□□ 0.69
SSBP4-201ENST00000270061 A6NDX4 124 aa19.35■□□□□ 0.69
SSBP4-201ENST00000270061 RAB31Q13636 194 aa19.35■□□□□ 0.69
SSBP4-201ENST00000270061 FFAR4Q5NUL3 377 aa19.35■□□□□ 0.69
SSBP4-201ENST00000270061 BPIFCQ8NFQ6 507 aa19.35■□□□□ 0.69
SSBP4-201ENST00000270061 OR2T6Q8NHC8 308 aa19.35■□□□□ 0.69
SSBP4-201ENST00000270061 GGTLC1Q9BX51 225 aa19.35■□□□□ 0.69
SSBP4-201ENST00000270061 AREGP15514 252 aa19.34■□□□□ 0.69
SSBP4-201ENST00000270061 ELLP55199 621 aaPredicted RBP19.34■□□□□ 0.69
SSBP4-201ENST00000270061 AKR1C1Q04828 323 aa19.34■□□□□ 0.69
SSBP4-201ENST00000270061 GAMTQ14353 236 aa19.34■□□□□ 0.69
SSBP4-201ENST00000270061 ZNF562Q6V9R5 426 aa19.34■□□□□ 0.69
SSBP4-201ENST00000270061 OR1P1Q8NH06 330 aa19.34■□□□□ 0.69
SSBP4-201ENST00000270061 LINC00052Q96N35 136 aa19.34■□□□□ 0.69
SSBP4-201ENST00000270061 PLXNB1O43157 2135 aa19.34■□□□□ 0.69
SSBP4-201ENST00000270061 CNIH1O95406 144 aa19.34■□□□□ 0.69
SSBP4-201ENST00000270061 CD5P06127 495 aa19.34■□□□□ 0.69
SSBP4-201ENST00000270061 RAB2AP61019 212 aa19.34■□□□□ 0.69
SSBP4-201ENST00000270061 ZNF726P1Q15940 193 aa19.34■□□□□ 0.69
SSBP4-201ENST00000270061 RPP25LQ8N5L8 163 aaKnown RBP19.34■□□□□ 0.69
SSBP4-201ENST00000270061 SFT2D1Q8WV19 159 aa19.34■□□□□ 0.69
SSBP4-201ENST00000270061 RCC1LQ96I51 464 aaKnown RBP19.34■□□□□ 0.69
SSBP4-201ENST00000270061 CMYA5Q8N3K9 4069 aa19.33■□□□□ 0.69
SSBP4-201ENST00000270061 AGPAT2O15120 278 aa19.33■□□□□ 0.68
SSBP4-201ENST00000270061 M6PRP20645 277 aa19.33■□□□□ 0.68
SSBP4-201ENST00000270061 SRSF3P84103 164 aaKnown RBP19.33■□□□□ 0.68
SSBP4-201ENST00000270061 FXYD3Q14802 87 aa19.33■□□□□ 0.68
SSBP4-201ENST00000270061 ACOT6Q3I5F7 207 aaPredicted RBP19.33■□□□□ 0.68
SSBP4-201ENST00000270061 SLC16A13Q7RTY0 426 aa19.33■□□□□ 0.68
SSBP4-201ENST00000270061 SCRT1Q9BWW7 348 aa19.33■□□□□ 0.68
SSBP4-201ENST00000270061 NCBP2LA6PVI3 153 aaKnown RBP19.32■□□□□ 0.68
SSBP4-201ENST00000270061 CORTO00230 105 aa19.32■□□□□ 0.68
SSBP4-201ENST00000270061 REG1AP05451 166 aa19.32■□□□□ 0.68
SSBP4-201ENST00000270061 RPL29P47914 159 aaKnown RBP19.32■□□□□ 0.68
SSBP4-201ENST00000270061 F11RQ9Y624 299 aaKnown RBP19.32■□□□□ 0.68
SSBP4-201ENST00000270061 MLANAQ16655 118 aa19.32■□□□□ 0.68
SSBP4-201ENST00000270061 Q8N9W7 124 aa19.32■□□□□ 0.68
SSBP4-201ENST00000270061 OR10G4Q8NGN3 311 aa19.32■□□□□ 0.68
SSBP4-201ENST00000270061 OR10G9Q8NGN4 311 aa19.32■□□□□ 0.68
SSBP4-201ENST00000270061 OR10G7Q8NGN6 311 aa19.32■□□□□ 0.68
SSBP4-201ENST00000270061 SLC35E1Q96K37 410 aa19.32■□□□□ 0.68
SSBP4-201ENST00000270061 TMEM218A2RU14 115 aa19.31■□□□□ 0.68
SSBP4-201ENST00000270061 CCL20P78556 96 aa19.31■□□□□ 0.68
SSBP4-201ENST00000270061 ETFRF1Q6IPR1 90 aa19.31■□□□□ 0.68
SSBP4-201ENST00000270061 PBDC1Q9BVG4 233 aa19.31■□□□□ 0.68
SSBP4-201ENST00000270061 FNDC4Q9H6D8 234 aaPredicted RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms