RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 OR1S1Q8NH92 325 aa6.37□□□□□ -1.39
ERCC8-201ENST00000265038 TMEM190Q8WZ59 177 aa6.37□□□□□ -1.39
ERCC8-201ENST00000265038 C20orf85Q9H1P6 137 aa6.37□□□□□ -1.39
ERCC8-201ENST00000265038 HIPK2Q9H2X6 1198 aa6.37□□□□□ -1.39
ERCC8-201ENST00000265038 GAR1Q9NY12 217 aaKnown RBP6.37□□□□□ -1.39
ERCC8-201ENST00000265038 UFC1Q9Y3C8 167 aa6.37□□□□□ -1.39
ERCC8-201ENST00000265038 SELENOKQ9Y6D0 94 aa6.37□□□□□ -1.39
ERCC8-201ENST00000265038 IGHV3OR16-8A0A075B7F1 116 aa6.36□□□□□ -1.39
ERCC8-201ENST00000265038 NUPL2O15504 423 aaKnown RBP6.36□□□□□ -1.39
ERCC8-201ENST00000265038 ADAP1O75689 374 aa6.36□□□□□ -1.39
ERCC8-201ENST00000265038 TMEM50AO95807 157 aa6.36□□□□□ -1.39
ERCC8-201ENST00000265038 OPRK1P41145 380 aa6.36□□□□□ -1.39
ERCC8-201ENST00000265038 ELLP55199 621 aaPredicted RBP6.36□□□□□ -1.39
ERCC8-201ENST00000265038 DCTN2Q13561 401 aaKnown RBP6.36□□□□□ -1.39
ERCC8-201ENST00000265038 ZNF846Q147U1 533 aa6.36□□□□□ -1.39
ERCC8-201ENST00000265038 LINC01559Q495D7 138 aa6.36□□□□□ -1.39
ERCC8-201ENST00000265038 C4orf46Q504U0 113 aa6.36□□□□□ -1.39
ERCC8-201ENST00000265038 LCN12Q6JVE5 192 aa6.36□□□□□ -1.39
ERCC8-201ENST00000265038 DTD1Q8TEA8 209 aa6.36□□□□□ -1.39
ERCC8-201ENST00000265038 DYNLRB2Q8TF09 96 aa6.36□□□□□ -1.39
ERCC8-201ENST00000265038 WDR12Q9GZL7 423 aaKnown RBP6.36□□□□□ -1.39
ERCC8-201ENST00000265038 PALMDQ9NP74 551 aa6.36□□□□□ -1.39
ERCC8-201ENST00000265038 TECRQ9NZ01 308 aaKnown RBP6.36□□□□□ -1.39
ERCC8-201ENST00000265038 MLXQ9UH92 298 aa6.36□□□□□ -1.39
ERCC8-201ENST00000265038 MPTX1A8MV57 137 aa6.35□□□□□ -1.39
ERCC8-201ENST00000265038 GNG7O60262 68 aa6.35□□□□□ -1.39
ERCC8-201ENST00000265038 UPK1BO75841 260 aa6.35□□□□□ -1.39
ERCC8-201ENST00000265038 NPY1RP25929 384 aa6.35□□□□□ -1.39
ERCC8-201ENST00000265038 NPBWR1P48145 328 aa6.35□□□□□ -1.39
ERCC8-201ENST00000265038 OR52B4Q8NGK2 314 aa6.35□□□□□ -1.39
ERCC8-201ENST00000265038 OR4X1Q8NH49 305 aa6.35□□□□□ -1.39
ERCC8-201ENST00000265038 COQ8AQ8NI60 647 aa6.35□□□□□ -1.39
ERCC8-201ENST00000265038 RNASEH2CQ8TDP1 164 aaKnown RBP6.35□□□□□ -1.39
ERCC8-201ENST00000265038 B9D2Q9BPU9 175 aa6.35□□□□□ -1.39
ERCC8-201ENST00000265038 C20orf24Q9BUV8 137 aa6.35□□□□□ -1.39
ERCC8-201ENST00000265038 KRTAP3-3Q9BYR6 98 aa6.35□□□□□ -1.39
ERCC8-201ENST00000265038 KRTAP3-2Q9BYR7 98 aa6.35□□□□□ -1.39
ERCC8-201ENST00000265038 MRPL27Q9P0M9 148 aaKnown RBP6.35□□□□□ -1.39
ERCC8-201ENST00000265038 SMAD5-AS1Q9Y6J3 95 aa6.35□□□□□ -1.39
ERCC8-201ENST00000265038 U3KQ87 197 aa6.35□□□□□ -1.39
ERCC8-201ENST00000265038 TRAV6A0A075B6T7 132 aa6.35□□□□□ -1.39
ERCC8-201ENST00000265038 K7EMT4 169 aa6.35□□□□□ -1.39
ERCC8-201ENST00000265038 ZNF207O43670 478 aaKnown RBP6.35□□□□□ -1.39
ERCC8-201ENST00000265038 CLN5O75503 358 aa6.35□□□□□ -1.39
ERCC8-201ENST00000265038 IFNA10P01566 189 aa6.35□□□□□ -1.39
ERCC8-201ENST00000265038 RELQ04864 619 aaPredicted RBP6.35□□□□□ -1.39
ERCC8-201ENST00000265038 ASAH1Q13510 395 aa6.35□□□□□ -1.39
ERCC8-201ENST00000265038 PRSS54Q6PEW0 395 aa6.35□□□□□ -1.39
ERCC8-201ENST00000265038 BTNL8Q6UX41 500 aa6.35□□□□□ -1.39
ERCC8-201ENST00000265038 MITD1Q8WV92 249 aa6.35□□□□□ -1.39
ERCC8-201ENST00000265038 MARC2Q969Z3 335 aa6.35□□□□□ -1.39
ERCC8-201ENST00000265038 WDR89Q96FK6 387 aaPredicted RBP6.35□□□□□ -1.39
ERCC8-201ENST00000265038 OR10C1Q96KK4 312 aa6.35□□□□□ -1.39
ERCC8-201ENST00000265038 DAZ1Q9NQZ3 744 aaKnown RBP6.35□□□□□ -1.39
ERCC8-201ENST00000265038 RPS10-NUDT3A0A1W2PQS6 291 aa6.34□□□□□ -1.39
ERCC8-201ENST00000265038 C15orf62A8K5M9 175 aa6.34□□□□□ -1.39
ERCC8-201ENST00000265038 FAM90A26D6RGX4 464 aa6.34□□□□□ -1.39
ERCC8-201ENST00000265038 IAPPP10997 89 aa6.34□□□□□ -1.39
ERCC8-201ENST00000265038 TMEM61Q8N0U2 210 aa6.34□□□□□ -1.39
ERCC8-201ENST00000265038 MAGT1Q9H0U3 335 aa6.34□□□□□ -1.39
ERCC8-201ENST00000265038 NUDT15Q9NV35 164 aa6.34□□□□□ -1.39
ERCC8-201ENST00000265038 FAM240BA0A1B0GVZ2 78 aa6.33□□□□□ -1.4
ERCC8-201ENST00000265038 YIF1AO95070 293 aa6.33□□□□□ -1.4
ERCC8-201ENST00000265038 IGKV1-17P01599 117 aa6.33□□□□□ -1.4
ERCC8-201ENST00000265038 H2AFB2P0C5Z0 115 aa6.33□□□□□ -1.4
ERCC8-201ENST00000265038 ID3Q02535 119 aa6.33□□□□□ -1.4
ERCC8-201ENST00000265038 CD69Q07108 199 aa6.33□□□□□ -1.4
ERCC8-201ENST00000265038 MZT2BQ6NZ67 158 aa6.33□□□□□ -1.4
ERCC8-201ENST00000265038 TOMM20LQ6UXN7 152 aa6.33□□□□□ -1.4
ERCC8-201ENST00000265038 NOXA1Q86UR1 476 aa6.33□□□□□ -1.4
ERCC8-201ENST00000265038 TMEM116Q8NCL8 245 aa6.33□□□□□ -1.4
ERCC8-201ENST00000265038 OR4D5Q8NGN0 318 aa6.33□□□□□ -1.4
ERCC8-201ENST00000265038 SEC22CQ9BRL7 303 aa6.33□□□□□ -1.4
ERCC8-201ENST00000265038 A8MZ25 164 aa6.33□□□□□ -1.4
ERCC8-201ENST00000265038 SYNGR2O43760 224 aa6.33□□□□□ -1.4
ERCC8-201ENST00000265038 MED6O75586 246 aa6.33□□□□□ -1.4
ERCC8-201ENST00000265038 IFNA21P01568 189 aa6.33□□□□□ -1.4
ERCC8-201ENST00000265038 CD7P09564 240 aa6.33□□□□□ -1.4
ERCC8-201ENST00000265038 IGLC1P0CG04 106 aa6.33□□□□□ -1.4
ERCC8-201ENST00000265038 IGHV4-30-4P0DP06 118 aa6.33□□□□□ -1.4
ERCC8-201ENST00000265038 SLC25A4P12235 298 aa6.33□□□□□ -1.4
ERCC8-201ENST00000265038 RND2P52198 227 aa6.33□□□□□ -1.4
ERCC8-201ENST00000265038 ATP5IP56385 69 aaPredicted RBP6.33□□□□□ -1.4
ERCC8-201ENST00000265038 GUCA2BQ16661 112 aa6.33□□□□□ -1.4
ERCC8-201ENST00000265038 TIGITQ495A1 244 aa6.33□□□□□ -1.4
ERCC8-201ENST00000265038 ETFRF1Q6IPR1 90 aa6.33□□□□□ -1.4
ERCC8-201ENST00000265038 ZNF600Q6ZNG1 722 aa6.33□□□□□ -1.4
ERCC8-201ENST00000265038 ZNF431Q8TF32 576 aaPredicted RBP6.33□□□□□ -1.4
ERCC8-201ENST00000265038 NPIPB3Q92617 1050 aa6.33□□□□□ -1.4
ERCC8-201ENST00000265038 ASCL2Q99929 193 aa6.33□□□□□ -1.4
ERCC8-201ENST00000265038 ZFAND3Q9H8U3 227 aa6.33□□□□□ -1.4
ERCC8-201ENST00000265038 C19orf73Q9NVV2 129 aa6.33□□□□□ -1.4
ERCC8-201ENST00000265038 SMPXQ9UHP9 88 aa6.33□□□□□ -1.4
ERCC8-201ENST00000265038 PUS1Q9Y606 427 aaKnown RBP eCLIP6.33□□□□□ -1.4
ERCC8-201ENST00000265038 TRAV14DV4A0A0A6YYC5 116 aa6.32□□□□□ -1.4
ERCC8-201ENST00000265038 TRAV25A0A0B4J276 109 aa6.32□□□□□ -1.4
ERCC8-201ENST00000265038 IGHV7-4-1A0A0J9YVY3 117 aa6.32□□□□□ -1.4
ERCC8-201ENST00000265038 WRBO00258 174 aa6.32□□□□□ -1.4
ERCC8-201ENST00000265038 CHEK1O14757 476 aa6.32□□□□□ -1.4
ERCC8-201ENST00000265038 SCAF4O95104 1147 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms